Gene description
TAIR ID: AT3G46620
Short description: zinc finger (C3HC4-type RING finger) family protein
Pathogen responsiveness: 0.63
General responsiveness: 0.49
GO biological process
response to chitin, abscisic acid-activated signaling pathway, proteasome-mediated ubiquitin-dependent protein catabolic process, protein polyubiquitination, protein ubiquitination involved in ubiquitin-dependent protein catabolic process, protein autoubiquitination, response to abscisic acid, response to water deprivation
GO cellular component
cytoplasm, nucleus, cytosol
GO molecular function
metal ion binding, ubiquitin protein ligase activity, ubiquitin-protein transferase activity
Protein domain
| Pfam | PF14369, zinc-ribbon |
| Pfam | PF13639, Ring finger domain |
| Pfam | PF06547, Protein of unknown function (DUF1117) |
| SMART | SM00184, RING |
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
Not involved in KEGG pathway
Protein-protein interaction network
No Interactor
Coexpression network
Differentially expressed condition 
32 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE12856 | Col, ataf1, control | Col, ataf1, Bg h | 1.88 | 6.42E-07 |
| GSE17464 | Laer, control | Laer, Flg22 1 h | 1.79 | 1.79E-05 |
| GSE17464 | Penta, control | Penta, Alternaria brassicicola 3 d | -1.75 | 2.37E-05 |
| GSE17464 | Penta, control | Penta, Flg22 2 h | 1.63 | 7.97E-05 |
| GSE17500 | Col, WT, control 0 h | Col, WT, PstDC3000 24 h | 1.61 | 1.59E-05 |
| GSE18329 | Col, WT, control | Col, WT, Hpa noco2 96 h | 2.61 | 2.17E-14 |
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | 1.65 | 1.76E-09 |
| GSE2169 | Col, rre1, water | Col, rre1, chitin 30 min | 1.72 | 6.01E-12 |
| GSE2538 | Col, WT, control | Col, WT, crab shell chitin 30 min | 2.76 | 1.66E-07 |
| GSE2538 | Col, WT, control | Col, WT, purified chitin octamer 30 min | 2.46 | 4.21E-07 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | 1.53 | 1.65E-08 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 4 h | 2.06 | 7.35E-10 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | 2.28 | 6.72E-11 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | 1.88 | 9.47E-10 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 3.00 | 1.35E-12 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | 2.53 | 1.08E-11 |
| GSE45214 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 4 h | 3.50 | 1.54E-14 |
| GSE45214 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 2.71 | 6.73E-13 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | 3.75 | 2.21E-15 |
| GSE45214 | Col, npr1, PstDC3000 AvrRpt2 0 h | Col, npr1, PstDC3000 AvrRpt2 4 h | 3.35 | 3.99E-14 |
| GSE4746 | Col, WT, water 30 min | Col, WT, chitooctaose 30 min | 2.60 | 9.63E-05 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- 10 h | 1.72 | 1.03E-02 |
| GSE56094 | Col, WT, control 13 h | Col, WT, PstDC3000 13 h | 1.50 | 7.14E-09 |
| GSE5615 | Col, WT, water 4 h | Col, WT, Flg22 4 h | 1.96 | 5.53E-09 |
| GSE5615 | Col, WT, water 4 h | Col, WT, HrpZ 4 h | 2.25 | 1.64E-10 |
| GSE58954 | Col, WT, Psm AvrRpt2 0 h | Col, WT, Psm AvrRpt2 6 h | 1.82 | 2.29E-02 |
| GSE6556 | Col, gh3.5, control | Col, gh3.5, PstDC3000 AvrRpt2 48 h | 2.63 | 2.68E-04 |
| GSE8319 | Col, WT, control | Col, WT, chitooctaose 30 min | 2.48 | 1.94E-13 |
| GSE9674 | Ws-4, AtMYB30 ox, control | Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h | 1.83 | 5.02E-04 |
| GSE9674 | Ws-4, AtMYB30 ox, control | Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h | 1.91 | 9.63E-04 |
| GSE9674 | Ws-4, WT, control | Ws-4, WT, Xanthomonas strain Xcc147 2-4 h | 1.88 | 5.90E-04 |
| GSE9674 | Ws-4, WT, control | Ws-4, WT, Xanthomonas strain Xcc147 6 h | 2.27 | 3.64E-04 |
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