Gene description
TAIR ID: AT3G27690
Short description: photosystem II light harvesting complex gene 2.3
Pathogen responsiveness: 1.83
General responsiveness: 3.85
Orthologous
GO biological process
photosynthesis, light harvesting in photosystem I, response to cold, response to red light, response to blue light, light harvesting in photosystem II, response to desiccation, response to far red light, response to high light intensity, protein-chromophore linkage, light harvesting, response to low light intensity stimulus, response to light stimulus
GO cellular component
chloroplast thylakoid membrane, photosystem I, plastoglobule, PSII associated light-harvesting complex II, chloroplast envelope, photosystem II, integral component of membrane, light-harvesting complex, thylakoid, chloroplast
GO molecular function
chlorophyll binding, metal ion binding, pigment binding
Metabolic pathway
Not involved in metabolic pathway
click to view PPI networkCoexpression network
Differentially expressed condition 
34 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE13739 | Col, WT, control 0 h | Col, WT, G.orontii 6 h | -4.54 | 5.01E-10 |
| GSE13739 | Col, WT, control 7 d | Col, WT, G.orontii 7 d | -1.71 | 4.38E-03 |
| GSE13739 | Col, eds, control 0 h | Col, eds, G.orontii 6 h | -4.81 | 1.15E-10 |
| GSE13739 | Col, eds, control 7 d | Col, eds, G.orontii 7 d | -2.08 | 9.13E-04 |
| GSE17464 | Laer, JA+Flg22 0 h | Laer, JA+Flg22 2 h | -3.16 | 1.14E-02 |
| GSE17464 | Laer, control | Laer, Flg22 2 h | -2.64 | 2.16E-02 |
| GSE17500 | Col, 35S:AFB1, control 0 h | Col, 35S:AFB1, PstDC3000 24 h | -2.25 | 4.12E-03 |
| GSE17500 | Col, WT, control 0 h | Col, WT, PstDC3000 24 h | -2.71 | 7.72E-04 |
| GSE17500 | Col, miR393, control 0 h | Col, miR393, PstDC3000 24 h | -2.16 | 4.93E-03 |
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | -6.26 | 3.44E-05 |
| GSE2169 | Col, WT, water | Col, WT, chitin 30 min | 2.11 | 7.35E-04 |
| GSE26679 | Col, WT, GC 0 h | Col, WT, GC 18 h | -5.49 | 9.73E-18 |
| GSE26679 | Col, WT, GC 0 h | Col, WT, GC 36 h | -6.70 | 6.42E-20 |
| GSE26679 | Col, edr1, GC 0 h | Col, edr1, GC 18 h | -5.20 | 2.80E-17 |
| GSE26679 | Col, edr1, GC 0 h | Col, edr1, GC 36 h | -6.10 | 2.69E-19 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 AvrRpt2 | -2.12 | 2.04E-04 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 EV | -1.70 | 1.38E-03 |
| GSE40544 | Col, Sid2, control | Col, Sid2, PstDC3000 AvrRpt2 | -2.22 | 1.44E-04 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | -4.38 | 8.34E-12 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | -3.61 | 1.86E-10 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | -4.57 | 5.17E-12 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | -2.82 | 6.03E-09 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | -4.50 | 5.43E-12 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | -2.89 | 1.27E-12 |
| GSE50526 | Col, WT, mock 24 h | Col, WT, A. brassicicola 24 h | -2.51 | 4.68E-02 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- 10 h | -5.51 | 7.15E-06 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- hrpS- 10 h | -4.57 | 2.44E-03 |
| GSE5520 | Col, WT, control 7 h | Col, WT, PstDC3000 7 h | -2.98 | 9.63E-04 |
| GSE56094 | Col, WT, control 12 h | Col, WT, PstDC3000 12 h | -2.13 | 2.70E-09 |
| GSE56094 | Col, WT, control 13 h | Col, WT, PstDC3000 13 h | -2.40 | 3.49E-11 |
| GSE5616 | Col, WT, water 24 h | Col, WT, P. infestans 24 h | -1.51 | 5.93E-06 |
| GSE58954 | Col, WT, Psm AvrRpt2 0 h | Col, WT, Psm AvrRpt2 6 h | -3.86 | 2.11E-04 |
| GSE6556 | Col, gh3.5, control | Col, gh3.5, PstDC3000 AvrRpt2 48 h | -2.12 | 9.01E-07 |
| GSE9674 | Ws-4, AtMYB30 ox, control | Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h | -3.81 | 3.39E-02 |
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