GO Enrichment Analysis of Co-expressed Genes with
AT3G27690
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015717: triose phosphate transport | 0.00E+00 |
| 2 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 3 | GO:1902171: regulation of tocopherol cyclase activity | 0.00E+00 |
| 4 | GO:2000121: regulation of removal of superoxide radicals | 0.00E+00 |
| 5 | GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process | 0.00E+00 |
| 6 | GO:0015979: photosynthesis | 2.26E-15 |
| 7 | GO:0015995: chlorophyll biosynthetic process | 4.10E-15 |
| 8 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.21E-08 |
| 9 | GO:0018298: protein-chromophore linkage | 6.42E-07 |
| 10 | GO:0010196: nonphotochemical quenching | 1.52E-05 |
| 11 | GO:0009637: response to blue light | 4.39E-05 |
| 12 | GO:0006782: protoporphyrinogen IX biosynthetic process | 4.84E-05 |
| 13 | GO:0010362: negative regulation of anion channel activity by blue light | 5.18E-05 |
| 14 | GO:0000476: maturation of 4.5S rRNA | 5.18E-05 |
| 15 | GO:0000967: rRNA 5'-end processing | 5.18E-05 |
| 16 | GO:0010155: regulation of proton transport | 1.27E-04 |
| 17 | GO:0034470: ncRNA processing | 1.27E-04 |
| 18 | GO:0035436: triose phosphate transmembrane transport | 2.17E-04 |
| 19 | GO:0015713: phosphoglycerate transport | 4.24E-04 |
| 20 | GO:0009904: chloroplast accumulation movement | 5.39E-04 |
| 21 | GO:0034052: positive regulation of plant-type hypersensitive response | 5.39E-04 |
| 22 | GO:0000160: phosphorelay signal transduction system | 6.55E-04 |
| 23 | GO:0009643: photosynthetic acclimation | 6.60E-04 |
| 24 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 6.60E-04 |
| 25 | GO:0009228: thiamine biosynthetic process | 6.60E-04 |
| 26 | GO:0010218: response to far red light | 6.85E-04 |
| 27 | GO:0009903: chloroplast avoidance movement | 7.87E-04 |
| 28 | GO:0010189: vitamin E biosynthetic process | 7.87E-04 |
| 29 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 7.87E-04 |
| 30 | GO:0010114: response to red light | 9.96E-04 |
| 31 | GO:0010078: maintenance of root meristem identity | 1.06E-03 |
| 32 | GO:0050821: protein stabilization | 1.06E-03 |
| 33 | GO:0009642: response to light intensity | 1.06E-03 |
| 34 | GO:0043068: positive regulation of programmed cell death | 1.06E-03 |
| 35 | GO:0006783: heme biosynthetic process | 1.35E-03 |
| 36 | GO:0009638: phototropism | 1.50E-03 |
| 37 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.50E-03 |
| 38 | GO:0055114: oxidation-reduction process | 1.57E-03 |
| 39 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.84E-03 |
| 40 | GO:0030148: sphingolipid biosynthetic process | 1.84E-03 |
| 41 | GO:0009698: phenylpropanoid metabolic process | 1.84E-03 |
| 42 | GO:0019684: photosynthesis, light reaction | 1.84E-03 |
| 43 | GO:0043085: positive regulation of catalytic activity | 1.84E-03 |
| 44 | GO:0009734: auxin-activated signaling pathway | 1.98E-03 |
| 45 | GO:0009767: photosynthetic electron transport chain | 2.19E-03 |
| 46 | GO:0009785: blue light signaling pathway | 2.19E-03 |
| 47 | GO:0009735: response to cytokinin | 2.37E-03 |
| 48 | GO:0010207: photosystem II assembly | 2.38E-03 |
| 49 | GO:0006289: nucleotide-excision repair | 2.96E-03 |
| 50 | GO:0040008: regulation of growth | 3.04E-03 |
| 51 | GO:0007017: microtubule-based process | 3.16E-03 |
| 52 | GO:0007623: circadian rhythm | 3.19E-03 |
| 53 | GO:0016114: terpenoid biosynthetic process | 3.37E-03 |
| 54 | GO:0009814: defense response, incompatible interaction | 3.59E-03 |
| 55 | GO:0070417: cellular response to cold | 4.26E-03 |
| 56 | GO:0006662: glycerol ether metabolic process | 4.72E-03 |
| 57 | GO:0007018: microtubule-based movement | 4.96E-03 |
| 58 | GO:0010193: response to ozone | 5.46E-03 |
| 59 | GO:0009723: response to ethylene | 5.67E-03 |
| 60 | GO:0016126: sterol biosynthetic process | 7.04E-03 |
| 61 | GO:0045454: cell redox homeostasis | 7.27E-03 |
| 62 | GO:0006629: lipid metabolic process | 8.97E-03 |
| 63 | GO:0010119: regulation of stomatal movement | 9.36E-03 |
| 64 | GO:0034599: cellular response to oxidative stress | 1.03E-02 |
| 65 | GO:0006812: cation transport | 1.40E-02 |
| 66 | GO:0009736: cytokinin-activated signaling pathway | 1.47E-02 |
| 67 | GO:0010224: response to UV-B | 1.51E-02 |
| 68 | GO:0009626: plant-type hypersensitive response | 1.74E-02 |
| 69 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.03E-02 |
| 70 | GO:0042742: defense response to bacterium | 3.24E-02 |
| 71 | GO:0009733: response to auxin | 3.63E-02 |
| 72 | GO:0009658: chloroplast organization | 3.81E-02 |
| 73 | GO:0007049: cell cycle | 4.12E-02 |
| 74 | GO:0046777: protein autophosphorylation | 4.66E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015038: glutathione disulfide oxidoreductase activity | 0.00E+00 |
| 2 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 3 | GO:0019912: cyclin-dependent protein kinase activating kinase activity | 0.00E+00 |
| 4 | GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity | 0.00E+00 |
| 5 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 6 | GO:0031409: pigment binding | 1.78E-06 |
| 7 | GO:0016168: chlorophyll binding | 2.15E-05 |
| 8 | GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity | 5.18E-05 |
| 9 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 5.18E-05 |
| 10 | GO:0004853: uroporphyrinogen decarboxylase activity | 5.18E-05 |
| 11 | GO:0052631: sphingolipid delta-8 desaturase activity | 5.18E-05 |
| 12 | GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity | 1.27E-04 |
| 13 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 1.27E-04 |
| 14 | GO:0016630: protochlorophyllide reductase activity | 1.27E-04 |
| 15 | GO:0071917: triose-phosphate transmembrane transporter activity | 2.17E-04 |
| 16 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 2.17E-04 |
| 17 | GO:0009882: blue light photoreceptor activity | 3.17E-04 |
| 18 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 3.17E-04 |
| 19 | GO:0016851: magnesium chelatase activity | 3.17E-04 |
| 20 | GO:0015120: phosphoglycerate transmembrane transporter activity | 4.24E-04 |
| 21 | GO:0004506: squalene monooxygenase activity | 4.24E-04 |
| 22 | GO:0070628: proteasome binding | 4.24E-04 |
| 23 | GO:0005515: protein binding | 5.39E-04 |
| 24 | GO:0031593: polyubiquitin binding | 6.60E-04 |
| 25 | GO:0004602: glutathione peroxidase activity | 7.87E-04 |
| 26 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.07E-03 |
| 27 | GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity | 1.20E-03 |
| 28 | GO:0008047: enzyme activator activity | 1.67E-03 |
| 29 | GO:0015035: protein disulfide oxidoreductase activity | 1.92E-03 |
| 30 | GO:0000155: phosphorelay sensor kinase activity | 2.19E-03 |
| 31 | GO:0008266: poly(U) RNA binding | 2.38E-03 |
| 32 | GO:0004190: aspartic-type endopeptidase activity | 2.56E-03 |
| 33 | GO:0043130: ubiquitin binding | 2.96E-03 |
| 34 | GO:0015297: antiporter activity | 3.04E-03 |
| 35 | GO:0047134: protein-disulfide reductase activity | 4.26E-03 |
| 36 | GO:0004791: thioredoxin-disulfide reductase activity | 4.96E-03 |
| 37 | GO:0010181: FMN binding | 4.96E-03 |
| 38 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 5.97E-03 |
| 39 | GO:0000156: phosphorelay response regulator activity | 5.97E-03 |
| 40 | GO:0003684: damaged DNA binding | 6.23E-03 |
| 41 | GO:0005200: structural constituent of cytoskeleton | 6.49E-03 |
| 42 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 9.06E-03 |
| 43 | GO:0004672: protein kinase activity | 1.06E-02 |
| 44 | GO:0004185: serine-type carboxypeptidase activity | 1.19E-02 |
| 45 | GO:0016298: lipase activity | 1.51E-02 |
| 46 | GO:0003777: microtubule motor activity | 1.58E-02 |
| 47 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.26E-02 |
| 48 | GO:0008017: microtubule binding | 2.88E-02 |
| 49 | GO:0005509: calcium ion binding | 2.99E-02 |
| 50 | GO:0042802: identical protein binding | 3.31E-02 |
| 51 | GO:0008168: methyltransferase activity | 3.71E-02 |
| 52 | GO:0016788: hydrolase activity, acting on ester bonds | 3.86E-02 |
| 53 | GO:0050660: flavin adenine dinucleotide binding | 4.23E-02 |
| 54 | GO:0016491: oxidoreductase activity | 4.25E-02 |
| 55 | GO:0008233: peptidase activity | 4.39E-02 |
| 56 | GO:0046872: metal ion binding | 4.52E-02 |
| 57 | GO:0052689: carboxylic ester hydrolase activity | 4.77E-02 |
| 58 | GO:0004674: protein serine/threonine kinase activity | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009783: photosystem II antenna complex | 0.00E+00 |
| 2 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 3 | GO:0009534: chloroplast thylakoid | 1.43E-26 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 8.06E-23 |
| 5 | GO:0009507: chloroplast | 1.62E-17 |
| 6 | GO:0009941: chloroplast envelope | 3.12E-14 |
| 7 | GO:0009579: thylakoid | 6.07E-13 |
| 8 | GO:0010287: plastoglobule | 1.29E-10 |
| 9 | GO:0009538: photosystem I reaction center | 3.23E-10 |
| 10 | GO:0009522: photosystem I | 1.07E-07 |
| 11 | GO:0009570: chloroplast stroma | 1.87E-07 |
| 12 | GO:0030095: chloroplast photosystem II | 1.17E-06 |
| 13 | GO:0009543: chloroplast thylakoid lumen | 1.27E-05 |
| 14 | GO:0031977: thylakoid lumen | 5.75E-05 |
| 15 | GO:0009654: photosystem II oxygen evolving complex | 1.45E-04 |
| 16 | GO:0042651: thylakoid membrane | 1.45E-04 |
| 17 | GO:0009706: chloroplast inner membrane | 1.68E-04 |
| 18 | GO:0010007: magnesium chelatase complex | 2.17E-04 |
| 19 | GO:0019898: extrinsic component of membrane | 3.13E-04 |
| 20 | GO:0009898: cytoplasmic side of plasma membrane | 4.24E-04 |
| 21 | GO:0009517: PSII associated light-harvesting complex II | 4.24E-04 |
| 22 | GO:0030660: Golgi-associated vesicle membrane | 4.24E-04 |
| 23 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 4.24E-04 |
| 24 | GO:0016020: membrane | 9.16E-04 |
| 25 | GO:0009986: cell surface | 9.18E-04 |
| 26 | GO:0009533: chloroplast stromal thylakoid | 9.18E-04 |
| 27 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.06E-03 |
| 28 | GO:0045298: tubulin complex | 1.35E-03 |
| 29 | GO:0005765: lysosomal membrane | 1.84E-03 |
| 30 | GO:0016021: integral component of membrane | 2.42E-03 |
| 31 | GO:0030076: light-harvesting complex | 2.56E-03 |
| 32 | GO:0005871: kinesin complex | 4.26E-03 |
| 33 | GO:0009523: photosystem II | 5.21E-03 |
| 34 | GO:0005874: microtubule | 5.87E-03 |
| 35 | GO:0031969: chloroplast membrane | 6.08E-03 |
| 36 | GO:0009707: chloroplast outer membrane | 8.46E-03 |
| 37 | GO:0031966: mitochondrial membrane | 1.40E-02 |
| 38 | GO:0010008: endosome membrane | 1.70E-02 |
| 39 | GO:0005623: cell | 2.26E-02 |