Gene: AT3G19580
     

Gene description


TAIR ID: AT3G19580

Short description: zinc-finger protein 2

Pathogen responsiveness: 0.76

General responsiveness: 1.40

Orthologous


Rice:

OS12G0583700  

Maize:

GRMZM2G035103   GRMZM2G105092  

Wheat: No orthologous gene

GO biological process


negative regulation of transcription, DNA-templated, response to abscisic acid, response to chitin, abscisic acid-activated signaling pathway, hyperosmotic salinity response, embryo development ending in seed dormancy, response to water deprivation, transcription


GO cellular component


nucleus


GO molecular function


transcription factor activity, sequence-specific DNA binding, metal ion binding


Protein domain


PfamPF13912, C2H2-type zinc finger
SMARTSM00355, ZnF_C2H2

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G07100, AT3G14230, AT5G22570, AT2G46130, AT1G24260, AT2G20180, AT2G43010

Target:
AT2G34710

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


36 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h2.114.43E-05
GSE16472Col, WT, Flg22 0 minCol, WT, Flg22 30 min3.074.87E-02
GSE17464Laer, controlLaer, Flg22 1 h1.572.47E-03
GSE17464Penta, controlPenta, Flg22 2 h2.105.38E-05
GSE17464Penta, controlPenta, Flg22 2 h1.785.04E-04
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h2.385.46E-05
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h2.885.64E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h2.582.35E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.852.83E-11
GSE2169Col, rre1, waterCol, rre1, chitin 30 min1.517.63E-08
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h1.561.45E-04
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min2.321.65E-07
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min2.292.28E-07
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.929.53E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.311.26E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.901.66E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.528.37E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.871.75E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h3.488.92E-15
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.525.58E-10
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.597.25E-14
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min2.579.63E-05
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h2.013.58E-04
GSE52979Col, WT, acetoneCol, WT, acetone flg22_24 h3.734.19E-02
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h2.511.07E-04
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h2.375.12E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h2.051.11E-04
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h2.101.80E-13
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h1.581.04E-08
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h2.065.12E-13
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h1.591.32E-08
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h1.637.59E-09
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h2.934.80E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h1.954.36E-04
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h1.602.40E-04
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min2.051.33E-09






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