Gene: AT3G13180
     


Gene description


TAIR ID: AT3G13180

Short description: NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein

Pathogen responsiveness: -0.54

General responsiveness: -0.21

Orthologous


Rice:

OS09G0477900  

Maize:

AC198353.5_FGT004  

Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated


GO cellular component


cytoplasm


GO molecular function


unkown


Protein domain


PfamPF01189, 16S rRNA methyltransferase RsmB/F
PfamPF01029, NusB family

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G56110

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


14 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.591.61E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.235.60E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.571.61E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-1.871.84E-10
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-1.523.32E-05
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-1.863.43E-06
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.142.03E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.783.38E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.995.42E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.744.62E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.975.33E-14
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.901.01E-10
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h-2.082.34E-02
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-1.501.32E-04






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