gene detail

Gene description

RAP-DB: OS09G0477900

Short description: NusB/RsmB/TIM44 domain containing protein.

Orthologous

Arabidopsis:

Maize:

Wheat: No orthologous

GO biological process

regulation of transcription, DNA-dependent (GO:0006355), rRNA processing (GO:0006364)

GO cellular component

unknown

GO molecular function

RNA binding (GO:0003723), methyltransferase activity (GO:0008168), rRNA methyltransferase activity (GO:0008649)

Protein domain

Pfam	PF01189, 16S rRNA methyltransferase RsmB/F
Pfam	PF01029, NusB family

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Coexpression network

GSE63047_T7174R view
GSE63047_DELTAHRCV view

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain PXO99AME7	-1.54	4.41E-03
GSE62894	Nipponbare, Pish, water 2 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 2 d	-2.25	3.67E-03
GSE62894	Nipponbare, Pish, water 5 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 5 d	-1.89	1.61E-02
GSE62894	Nipponbare, pish, water 2 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 2 d	-2.28	7.97E-03
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-4.76	4.73E-09
GSE63047	Nipponbare, water 7 d	Nipponbare, Xanthomonas oryzae T7174R 7 d	-1.83	1.73E-02