gene detail

Gene description

TAIR ID: AT3G07540

Short description: Actin-binding FH2 (formin homology 2) family protein

Pathogen responsiveness: -0.85

General responsiveness: -1.89

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

unkown

GO cellular component

plasma membrane, integral component of membrane

GO molecular function

unkown

Protein domain

Pfam	PF02181, Formin Homology 2 Domain
SMART	SM00498, FH2

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G07100, AT5G22570, AT2G46130, AT1G24260, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 15 (Top20%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

10 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Flg22 2 h	-1.74	3.93E-07
GSE37269	Di2, WT, control	Di2, WT, TEV 21 d	1.84	4.95E-02
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-1.99	1.53E-03
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-1.52	1.14E-02
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 EV	-1.55	1.96E-02
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.70	9.59E-11
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.10	6.25E-07
GSE5520	Col, WT, control 10 h	Col, WT, Cor- hrpS- 10 h	-1.59	1.48E-03
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	-1.74	1.47E-05
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.67	3.92E-03