GO Enrichment Analysis of Co-expressed Genes with
AT3G07540
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
2 | GO:0009606: tropism | 0.00E+00 |
3 | GO:0090322: regulation of superoxide metabolic process | 0.00E+00 |
4 | GO:0000372: Group I intron splicing | 0.00E+00 |
5 | GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement | 0.00E+00 |
6 | GO:0044774: mitotic DNA integrity checkpoint | 0.00E+00 |
7 | GO:0080127: fruit septum development | 0.00E+00 |
8 | GO:0019988: charged-tRNA amino acid modification | 0.00E+00 |
9 | GO:0090615: mitochondrial mRNA processing | 0.00E+00 |
10 | GO:0000492: box C/D snoRNP assembly | 0.00E+00 |
11 | GO:0042794: rRNA transcription from plastid promoter | 0.00E+00 |
12 | GO:0010323: negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 0.00E+00 |
13 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
14 | GO:0000819: sister chromatid segregation | 0.00E+00 |
15 | GO:0010059: positive regulation of atrichoblast fate specification | 0.00E+00 |
16 | GO:0000491: small nucleolar ribonucleoprotein complex assembly | 0.00E+00 |
17 | GO:0009658: chloroplast organization | 1.57E-06 |
18 | GO:0042793: transcription from plastid promoter | 6.38E-06 |
19 | GO:0006353: DNA-templated transcription, termination | 2.54E-05 |
20 | GO:0042127: regulation of cell proliferation | 4.46E-05 |
21 | GO:0006351: transcription, DNA-templated | 1.22E-04 |
22 | GO:1900864: mitochondrial RNA modification | 1.30E-04 |
23 | GO:0048497: maintenance of floral organ identity | 2.00E-04 |
24 | GO:0009913: epidermal cell differentiation | 2.83E-04 |
25 | GO:0009793: embryo development ending in seed dormancy | 4.74E-04 |
26 | GO:0080112: seed growth | 4.81E-04 |
27 | GO:1905039: carboxylic acid transmembrane transport | 4.81E-04 |
28 | GO:1905200: gibberellic acid transmembrane transport | 4.81E-04 |
29 | GO:1903866: palisade mesophyll development | 4.81E-04 |
30 | GO:0010063: positive regulation of trichoblast fate specification | 4.81E-04 |
31 | GO:0090063: positive regulation of microtubule nucleation | 4.81E-04 |
32 | GO:0042759: long-chain fatty acid biosynthetic process | 4.81E-04 |
33 | GO:0033206: meiotic cytokinesis | 4.81E-04 |
34 | GO:0034757: negative regulation of iron ion transport | 4.81E-04 |
35 | GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic | 4.81E-04 |
36 | GO:0006401: RNA catabolic process | 4.86E-04 |
37 | GO:0006955: immune response | 4.86E-04 |
38 | GO:0042255: ribosome assembly | 6.06E-04 |
39 | GO:0010305: leaf vascular tissue pattern formation | 7.24E-04 |
40 | GO:0007389: pattern specification process | 7.39E-04 |
41 | GO:0000373: Group II intron splicing | 8.84E-04 |
42 | GO:0040008: regulation of growth | 8.91E-04 |
43 | GO:0006355: regulation of transcription, DNA-templated | 9.78E-04 |
44 | GO:0010583: response to cyclopentenone | 1.03E-03 |
45 | GO:1900865: chloroplast RNA modification | 1.04E-03 |
46 | GO:0010569: regulation of double-strand break repair via homologous recombination | 1.04E-03 |
47 | GO:0048731: system development | 1.04E-03 |
48 | GO:0010271: regulation of chlorophyll catabolic process | 1.04E-03 |
49 | GO:0010541: acropetal auxin transport | 1.04E-03 |
50 | GO:2000071: regulation of defense response by callose deposition | 1.04E-03 |
51 | GO:0009662: etioplast organization | 1.04E-03 |
52 | GO:0080009: mRNA methylation | 1.04E-03 |
53 | GO:1901529: positive regulation of anion channel activity | 1.04E-03 |
54 | GO:0033566: gamma-tubulin complex localization | 1.04E-03 |
55 | GO:0006364: rRNA processing | 1.08E-03 |
56 | GO:0048829: root cap development | 1.21E-03 |
57 | GO:0048229: gametophyte development | 1.40E-03 |
58 | GO:0090391: granum assembly | 1.69E-03 |
59 | GO:0006518: peptide metabolic process | 1.69E-03 |
60 | GO:0042780: tRNA 3'-end processing | 1.69E-03 |
61 | GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic | 1.69E-03 |
62 | GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement | 1.69E-03 |
63 | GO:0080117: secondary growth | 1.69E-03 |
64 | GO:0010588: cotyledon vascular tissue pattern formation | 1.82E-03 |
65 | GO:0009558: embryo sac cellularization | 2.45E-03 |
66 | GO:0010371: regulation of gibberellin biosynthetic process | 2.45E-03 |
67 | GO:0010071: root meristem specification | 2.45E-03 |
68 | GO:0009102: biotin biosynthetic process | 2.45E-03 |
69 | GO:0010239: chloroplast mRNA processing | 2.45E-03 |
70 | GO:0007276: gamete generation | 2.45E-03 |
71 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 2.45E-03 |
72 | GO:2000377: regulation of reactive oxygen species metabolic process | 2.85E-03 |
73 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.23E-03 |
74 | GO:2000038: regulation of stomatal complex development | 3.30E-03 |
75 | GO:0006808: regulation of nitrogen utilization | 3.30E-03 |
76 | GO:0006479: protein methylation | 3.30E-03 |
77 | GO:0006221: pyrimidine nucleotide biosynthetic process | 3.30E-03 |
78 | GO:0009734: auxin-activated signaling pathway | 3.33E-03 |
79 | GO:0003333: amino acid transmembrane transport | 3.46E-03 |
80 | GO:0016998: cell wall macromolecule catabolic process | 3.46E-03 |
81 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 3.79E-03 |
82 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 4.14E-03 |
83 | GO:0016558: protein import into peroxisome matrix | 4.23E-03 |
84 | GO:0016120: carotene biosynthetic process | 4.23E-03 |
85 | GO:0016123: xanthophyll biosynthetic process | 4.23E-03 |
86 | GO:0032876: negative regulation of DNA endoreduplication | 4.23E-03 |
87 | GO:0030308: negative regulation of cell growth | 4.23E-03 |
88 | GO:0009451: RNA modification | 4.44E-03 |
89 | GO:0010315: auxin efflux | 5.24E-03 |
90 | GO:0048831: regulation of shoot system development | 5.24E-03 |
91 | GO:0003006: developmental process involved in reproduction | 5.24E-03 |
92 | GO:0009643: photosynthetic acclimation | 5.24E-03 |
93 | GO:0009959: negative gravitropism | 5.24E-03 |
94 | GO:0016554: cytidine to uridine editing | 5.24E-03 |
95 | GO:0060918: auxin transport | 5.24E-03 |
96 | GO:0009416: response to light stimulus | 5.25E-03 |
97 | GO:0010501: RNA secondary structure unwinding | 5.27E-03 |
98 | GO:0010087: phloem or xylem histogenesis | 5.27E-03 |
99 | GO:0007018: microtubule-based movement | 6.12E-03 |
100 | GO:2000033: regulation of seed dormancy process | 6.32E-03 |
101 | GO:0009942: longitudinal axis specification | 6.32E-03 |
102 | GO:0048509: regulation of meristem development | 6.32E-03 |
103 | GO:2000037: regulation of stomatal complex patterning | 6.32E-03 |
104 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 6.32E-03 |
105 | GO:0010310: regulation of hydrogen peroxide metabolic process | 6.32E-03 |
106 | GO:0009955: adaxial/abaxial pattern specification | 6.32E-03 |
107 | GO:0048825: cotyledon development | 6.57E-03 |
108 | GO:0080156: mitochondrial mRNA modification | 7.03E-03 |
109 | GO:0010098: suspensor development | 7.48E-03 |
110 | GO:0010444: guard mother cell differentiation | 7.48E-03 |
111 | GO:0000082: G1/S transition of mitotic cell cycle | 7.48E-03 |
112 | GO:0010103: stomatal complex morphogenesis | 7.48E-03 |
113 | GO:0048367: shoot system development | 7.48E-03 |
114 | GO:0000712: resolution of meiotic recombination intermediates | 7.48E-03 |
115 | GO:0010374: stomatal complex development | 7.48E-03 |
116 | GO:0030497: fatty acid elongation | 7.48E-03 |
117 | GO:0048437: floral organ development | 7.48E-03 |
118 | GO:0032502: developmental process | 7.52E-03 |
119 | GO:0009828: plant-type cell wall loosening | 8.54E-03 |
120 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 8.71E-03 |
121 | GO:0009642: response to light intensity | 8.71E-03 |
122 | GO:0046620: regulation of organ growth | 8.71E-03 |
123 | GO:0048766: root hair initiation | 8.71E-03 |
124 | GO:0010492: maintenance of shoot apical meristem identity | 8.71E-03 |
125 | GO:0052543: callose deposition in cell wall | 8.71E-03 |
126 | GO:0009938: negative regulation of gibberellic acid mediated signaling pathway | 8.71E-03 |
127 | GO:0006402: mRNA catabolic process | 8.71E-03 |
128 | GO:0010233: phloem transport | 1.00E-02 |
129 | GO:0010497: plasmodesmata-mediated intercellular transport | 1.00E-02 |
130 | GO:0010052: guard cell differentiation | 1.00E-02 |
131 | GO:0048574: long-day photoperiodism, flowering | 1.00E-02 |
132 | GO:0032544: plastid translation | 1.00E-02 |
133 | GO:0009827: plant-type cell wall modification | 1.00E-02 |
134 | GO:0019430: removal of superoxide radicals | 1.00E-02 |
135 | GO:0048366: leaf development | 1.07E-02 |
136 | GO:0010029: regulation of seed germination | 1.08E-02 |
137 | GO:0048507: meristem development | 1.14E-02 |
138 | GO:0048589: developmental growth | 1.14E-02 |
139 | GO:0000902: cell morphogenesis | 1.14E-02 |
140 | GO:0031425: chloroplast RNA processing | 1.28E-02 |
141 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.28E-02 |
142 | GO:0006349: regulation of gene expression by genetic imprinting | 1.28E-02 |
143 | GO:0048481: plant ovule development | 1.34E-02 |
144 | GO:0006535: cysteine biosynthetic process from serine | 1.43E-02 |
145 | GO:0009641: shade avoidance | 1.43E-02 |
146 | GO:0016441: posttranscriptional gene silencing | 1.43E-02 |
147 | GO:0006949: syncytium formation | 1.43E-02 |
148 | GO:0006259: DNA metabolic process | 1.43E-02 |
149 | GO:0010048: vernalization response | 1.43E-02 |
150 | GO:0045892: negative regulation of transcription, DNA-templated | 1.55E-02 |
151 | GO:0006265: DNA topological change | 1.58E-02 |
152 | GO:0009682: induced systemic resistance | 1.58E-02 |
153 | GO:0008285: negative regulation of cell proliferation | 1.58E-02 |
154 | GO:0015770: sucrose transport | 1.58E-02 |
155 | GO:1903507: negative regulation of nucleic acid-templated transcription | 1.58E-02 |
156 | GO:0009750: response to fructose | 1.58E-02 |
157 | GO:0048765: root hair cell differentiation | 1.58E-02 |
158 | GO:0046856: phosphatidylinositol dephosphorylation | 1.58E-02 |
159 | GO:0000038: very long-chain fatty acid metabolic process | 1.58E-02 |
160 | GO:0006865: amino acid transport | 1.62E-02 |
161 | GO:0009867: jasmonic acid mediated signaling pathway | 1.70E-02 |
162 | GO:0010152: pollen maturation | 1.74E-02 |
163 | GO:0045037: protein import into chloroplast stroma | 1.74E-02 |
164 | GO:0010582: floral meristem determinacy | 1.74E-02 |
165 | GO:0008361: regulation of cell size | 1.74E-02 |
166 | GO:0006312: mitotic recombination | 1.74E-02 |
167 | GO:0012501: programmed cell death | 1.74E-02 |
168 | GO:0010102: lateral root morphogenesis | 1.91E-02 |
169 | GO:0030001: metal ion transport | 1.94E-02 |
170 | GO:0010020: chloroplast fission | 2.08E-02 |
171 | GO:0006270: DNA replication initiation | 2.08E-02 |
172 | GO:0009887: animal organ morphogenesis | 2.08E-02 |
173 | GO:0010540: basipetal auxin transport | 2.08E-02 |
174 | GO:0048768: root hair cell tip growth | 2.08E-02 |
175 | GO:0048467: gynoecium development | 2.08E-02 |
176 | GO:0009739: response to gibberellin | 2.11E-02 |
177 | GO:0009744: response to sucrose | 2.19E-02 |
178 | GO:0048364: root development | 2.21E-02 |
179 | GO:0006397: mRNA processing | 2.21E-02 |
180 | GO:0080188: RNA-directed DNA methylation | 2.26E-02 |
181 | GO:0009901: anther dehiscence | 2.26E-02 |
182 | GO:0008380: RNA splicing | 2.29E-02 |
183 | GO:0010025: wax biosynthetic process | 2.44E-02 |
184 | GO:0006636: unsaturated fatty acid biosynthetic process | 2.44E-02 |
185 | GO:0009733: response to auxin | 2.56E-02 |
186 | GO:0009863: salicylic acid mediated signaling pathway | 2.62E-02 |
187 | GO:0010187: negative regulation of seed germination | 2.62E-02 |
188 | GO:0019344: cysteine biosynthetic process | 2.62E-02 |
189 | GO:0006260: DNA replication | 2.66E-02 |
190 | GO:0031347: regulation of defense response | 2.66E-02 |
191 | GO:0009664: plant-type cell wall organization | 2.76E-02 |
192 | GO:0010073: meristem maintenance | 2.82E-02 |
193 | GO:0009736: cytokinin-activated signaling pathway | 2.96E-02 |
194 | GO:0010431: seed maturation | 3.01E-02 |
195 | GO:0030245: cellulose catabolic process | 3.21E-02 |
196 | GO:0071215: cellular response to abscisic acid stimulus | 3.42E-02 |
197 | GO:0010082: regulation of root meristem growth | 3.42E-02 |
198 | GO:0010091: trichome branching | 3.63E-02 |
199 | GO:0048443: stamen development | 3.63E-02 |
200 | GO:0006468: protein phosphorylation | 3.70E-02 |
201 | GO:0070417: cellular response to cold | 3.84E-02 |
202 | GO:0009740: gibberellic acid mediated signaling pathway | 3.96E-02 |
203 | GO:0042335: cuticle development | 4.06E-02 |
204 | GO:0080022: primary root development | 4.06E-02 |
205 | GO:0008033: tRNA processing | 4.06E-02 |
206 | GO:0010118: stomatal movement | 4.06E-02 |
207 | GO:0042631: cellular response to water deprivation | 4.06E-02 |
208 | GO:0009624: response to nematode | 4.20E-02 |
209 | GO:0071472: cellular response to salt stress | 4.28E-02 |
210 | GO:0009741: response to brassinosteroid | 4.28E-02 |
211 | GO:0009960: endosperm development | 4.28E-02 |
212 | GO:0009958: positive gravitropism | 4.28E-02 |
213 | GO:0006396: RNA processing | 4.33E-02 |
214 | GO:0051726: regulation of cell cycle | 4.45E-02 |
215 | GO:0007059: chromosome segregation | 4.51E-02 |
216 | GO:0009749: response to glucose | 4.74E-02 |
217 | GO:0002229: defense response to oomycetes | 4.97E-02 |
218 | GO:0006635: fatty acid beta-oxidation | 4.97E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0004015: adenosylmethionine-8-amino-7-oxononanoate transaminase activity | 0.00E+00 |
2 | GO:0043399: tRNA A64-2'-O-ribosylphosphate transferase activity | 0.00E+00 |
3 | GO:0016763: transferase activity, transferring pentosyl groups | 0.00E+00 |
4 | GO:0008859: exoribonuclease II activity | 0.00E+00 |
5 | GO:0042834: peptidoglycan binding | 0.00E+00 |
6 | GO:0004141: dethiobiotin synthase activity | 0.00E+00 |
7 | GO:0003723: RNA binding | 1.75E-06 |
8 | GO:0003697: single-stranded DNA binding | 4.64E-04 |
9 | GO:0016274: protein-arginine N-methyltransferase activity | 4.81E-04 |
10 | GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor | 4.81E-04 |
11 | GO:0004654: polyribonucleotide nucleotidyltransferase activity | 4.81E-04 |
12 | GO:0004016: adenylate cyclase activity | 4.81E-04 |
13 | GO:1905201: gibberellin transmembrane transporter activity | 4.81E-04 |
14 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 4.81E-04 |
15 | GO:0003727: single-stranded RNA binding | 5.37E-04 |
16 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 7.18E-04 |
17 | GO:0008173: RNA methyltransferase activity | 7.39E-04 |
18 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 1.04E-03 |
19 | GO:0009884: cytokinin receptor activity | 1.04E-03 |
20 | GO:0042389: omega-3 fatty acid desaturase activity | 1.04E-03 |
21 | GO:0043565: sequence-specific DNA binding | 1.09E-03 |
22 | GO:0003690: double-stranded DNA binding | 1.14E-03 |
23 | GO:0042781: 3'-tRNA processing endoribonuclease activity | 1.69E-03 |
24 | GO:0016805: dipeptidase activity | 1.69E-03 |
25 | GO:0005034: osmosensor activity | 1.69E-03 |
26 | GO:0017150: tRNA dihydrouridine synthase activity | 1.69E-03 |
27 | GO:0003677: DNA binding | 1.69E-03 |
28 | GO:0000175: 3'-5'-exoribonuclease activity | 1.82E-03 |
29 | GO:0004519: endonuclease activity | 1.99E-03 |
30 | GO:0009041: uridylate kinase activity | 2.45E-03 |
31 | GO:0003916: DNA topoisomerase activity | 2.45E-03 |
32 | GO:0001872: (1->3)-beta-D-glucan binding | 2.45E-03 |
33 | GO:0019843: rRNA binding | 2.61E-03 |
34 | GO:0008289: lipid binding | 3.25E-03 |
35 | GO:0010011: auxin binding | 3.30E-03 |
36 | GO:0010328: auxin influx transmembrane transporter activity | 3.30E-03 |
37 | GO:0030570: pectate lyase activity | 4.14E-03 |
38 | GO:0042803: protein homodimerization activity | 4.54E-03 |
39 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 5.24E-03 |
40 | GO:0004784: superoxide dismutase activity | 5.24E-03 |
41 | GO:0003688: DNA replication origin binding | 5.24E-03 |
42 | GO:0016832: aldehyde-lyase activity | 6.32E-03 |
43 | GO:0019900: kinase binding | 6.32E-03 |
44 | GO:0004124: cysteine synthase activity | 6.32E-03 |
45 | GO:0003777: microtubule motor activity | 6.60E-03 |
46 | GO:0030515: snoRNA binding | 7.48E-03 |
47 | GO:0008168: methyltransferase activity | 7.87E-03 |
48 | GO:0008026: ATP-dependent helicase activity | 9.81E-03 |
49 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 1.00E-02 |
50 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 1.00E-02 |
51 | GO:0003724: RNA helicase activity | 1.00E-02 |
52 | GO:0000989: transcription factor activity, transcription factor binding | 1.14E-02 |
53 | GO:0004004: ATP-dependent RNA helicase activity | 1.20E-02 |
54 | GO:0009672: auxin:proton symporter activity | 1.28E-02 |
55 | GO:0016887: ATPase activity | 1.30E-02 |
56 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 1.43E-02 |
57 | GO:0004673: protein histidine kinase activity | 1.43E-02 |
58 | GO:0008515: sucrose transmembrane transporter activity | 1.58E-02 |
59 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 1.74E-02 |
60 | GO:0005524: ATP binding | 1.85E-02 |
61 | GO:0010329: auxin efflux transmembrane transporter activity | 1.91E-02 |
62 | GO:0000155: phosphorelay sensor kinase activity | 1.91E-02 |
63 | GO:0009982: pseudouridine synthase activity | 1.91E-02 |
64 | GO:0003725: double-stranded RNA binding | 1.91E-02 |
65 | GO:0003712: transcription cofactor activity | 2.26E-02 |
66 | GO:0051119: sugar transmembrane transporter activity | 2.26E-02 |
67 | GO:0004190: aspartic-type endopeptidase activity | 2.26E-02 |
68 | GO:0004674: protein serine/threonine kinase activity | 2.34E-02 |
69 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 2.44E-02 |
70 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 2.44E-02 |
71 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 2.44E-02 |
72 | GO:0015293: symporter activity | 2.47E-02 |
73 | GO:0005215: transporter activity | 2.49E-02 |
74 | GO:0003714: transcription corepressor activity | 2.62E-02 |
75 | GO:0015079: potassium ion transmembrane transporter activity | 2.82E-02 |
76 | GO:0043424: protein histidine kinase binding | 2.82E-02 |
77 | GO:0005515: protein binding | 2.99E-02 |
78 | GO:0008094: DNA-dependent ATPase activity | 3.01E-02 |
79 | GO:0004540: ribonuclease activity | 3.01E-02 |
80 | GO:0016298: lipase activity | 3.06E-02 |
81 | GO:0015171: amino acid transmembrane transporter activity | 3.28E-02 |
82 | GO:0008810: cellulase activity | 3.42E-02 |
83 | GO:0018024: histone-lysine N-methyltransferase activity | 3.84E-02 |
84 | GO:0005102: receptor binding | 3.84E-02 |
85 | GO:0004672: protein kinase activity | 4.19E-02 |
86 | GO:0003713: transcription coactivator activity | 4.28E-02 |
87 | GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity | 4.28E-02 |
88 | GO:0001085: RNA polymerase II transcription factor binding | 4.28E-02 |
89 | GO:0004386: helicase activity | 4.58E-02 |
90 | GO:0052689: carboxylic ester hydrolase activity | 4.66E-02 |
91 | GO:0019901: protein kinase binding | 4.74E-02 |
92 | GO:0048038: quinone binding | 4.97E-02 |