gene detail

Gene description

TAIR ID: AT2G47450

Short description: chloroplast signal recognition particle component (CAO)

Pathogen responsiveness: 0.47

General responsiveness: 2.01

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G007441

Wheat: No orthologous gene

GO biological process

response to high light intensity, protein import into chloroplast thylakoid membrane

GO cellular component

chloroplast thylakoid membrane, intracellular, chloroplast stroma, signal recognition particle, endoplasmic reticulum targeting, chloroplast, chloroplast envelope, cell

GO molecular function

protein binding, identical protein binding

Protein domain

Pfam	PF00385, Chromo (CHRromatin Organisation MOdifier) domain
Pfam	PF12796, Ankyrin repeats (3 copies)
SMART	SM00298, CHROMO
SMART	SM00248, ANK

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT2G38250, AT1G24260, AT5G61850, AT2G47190

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 21 (Top10%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

34 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_24 h	3.16	1.85E-03
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	2.30	9.70E-03
GSE17464	Laer, control	Laer, PstDC3000 12 h	1.69	1.30E-03
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	1.68	1.22E-03
GSE17464	Laer, control	Laer, Flg22 2 h	-1.52	2.52E-03
GSE56094	Col, WT, control 8 h	Col, WT, hrpA- 8 h	-1.56	4.14E-05
GSE56094	Col, WT, control 7 h	Col, WT, hrpA- 7 h	-1.64	3.14E-05
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.65	7.25E-07
GSE17464	Penta, control	Penta, Flg22 2 h	-1.67	9.21E-04
GSE56094	Col, WT, control 4 h	Col, WT, PstDC3000 4 h	-1.71	1.64E-05

Showing 1 to 10 of 34 entries

Previous1 2 3 4Next