GO Enrichment Analysis of Co-expressed Genes with
AT2G47450
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:2000121: regulation of removal of superoxide radicals | 0.00E+00 |
| 2 | GO:0007037: vacuolar phosphate transport | 0.00E+00 |
| 3 | GO:0031054: pre-miRNA processing | 0.00E+00 |
| 4 | GO:2001294: malonyl-CoA catabolic process | 0.00E+00 |
| 5 | GO:0043488: regulation of mRNA stability | 0.00E+00 |
| 6 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 7 | GO:0090706: specification of plant organ position | 0.00E+00 |
| 8 | GO:0009647: skotomorphogenesis | 4.24E-05 |
| 9 | GO:0006021: inositol biosynthetic process | 7.53E-05 |
| 10 | GO:1902183: regulation of shoot apical meristem development | 1.18E-04 |
| 11 | GO:0010158: abaxial cell fate specification | 1.18E-04 |
| 12 | GO:0006659: phosphatidylserine biosynthetic process | 3.47E-04 |
| 13 | GO:0006264: mitochondrial DNA replication | 3.47E-04 |
| 14 | GO:0033259: plastid DNA replication | 3.47E-04 |
| 15 | GO:0010450: inflorescence meristem growth | 3.47E-04 |
| 16 | GO:0051171: regulation of nitrogen compound metabolic process | 3.47E-04 |
| 17 | GO:0010362: negative regulation of anion channel activity by blue light | 3.47E-04 |
| 18 | GO:0007155: cell adhesion | 3.76E-04 |
| 19 | GO:0009585: red, far-red light phototransduction | 5.16E-04 |
| 20 | GO:2000024: regulation of leaf development | 5.52E-04 |
| 21 | GO:0009638: phototropism | 6.53E-04 |
| 22 | GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole | 7.56E-04 |
| 23 | GO:0010115: regulation of abscisic acid biosynthetic process | 7.56E-04 |
| 24 | GO:1900871: chloroplast mRNA modification | 7.56E-04 |
| 25 | GO:0030187: melatonin biosynthetic process | 7.56E-04 |
| 26 | GO:0007154: cell communication | 7.56E-04 |
| 27 | GO:1900033: negative regulation of trichome patterning | 7.56E-04 |
| 28 | GO:0010155: regulation of proton transport | 7.56E-04 |
| 29 | GO:0015804: neutral amino acid transport | 7.56E-04 |
| 30 | GO:0009405: pathogenesis | 1.22E-03 |
| 31 | GO:0006753: nucleoside phosphate metabolic process | 1.22E-03 |
| 32 | GO:0010589: leaf proximal/distal pattern formation | 1.22E-03 |
| 33 | GO:0080055: low-affinity nitrate transport | 1.22E-03 |
| 34 | GO:0045165: cell fate commitment | 1.22E-03 |
| 35 | GO:0042753: positive regulation of circadian rhythm | 1.59E-03 |
| 36 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.76E-03 |
| 37 | GO:0006164: purine nucleotide biosynthetic process | 1.76E-03 |
| 38 | GO:0009963: positive regulation of flavonoid biosynthetic process | 1.76E-03 |
| 39 | GO:0010255: glucose mediated signaling pathway | 1.76E-03 |
| 40 | GO:0046739: transport of virus in multicellular host | 1.76E-03 |
| 41 | GO:0006168: adenine salvage | 1.76E-03 |
| 42 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.76E-03 |
| 43 | GO:0009067: aspartate family amino acid biosynthetic process | 1.76E-03 |
| 44 | GO:0006166: purine ribonucleoside salvage | 1.76E-03 |
| 45 | GO:0009649: entrainment of circadian clock | 2.37E-03 |
| 46 | GO:0008295: spermidine biosynthetic process | 2.37E-03 |
| 47 | GO:0032366: intracellular sterol transport | 2.37E-03 |
| 48 | GO:0048629: trichome patterning | 2.37E-03 |
| 49 | GO:0051322: anaphase | 2.37E-03 |
| 50 | GO:0035279: mRNA cleavage involved in gene silencing by miRNA | 2.37E-03 |
| 51 | GO:0034052: positive regulation of plant-type hypersensitive response | 3.03E-03 |
| 52 | GO:0046283: anthocyanin-containing compound metabolic process | 3.03E-03 |
| 53 | GO:0009904: chloroplast accumulation movement | 3.03E-03 |
| 54 | GO:0044209: AMP salvage | 3.03E-03 |
| 55 | GO:0010154: fruit development | 3.49E-03 |
| 56 | GO:0048831: regulation of shoot system development | 3.74E-03 |
| 57 | GO:0000741: karyogamy | 3.74E-03 |
| 58 | GO:0046855: inositol phosphate dephosphorylation | 3.74E-03 |
| 59 | GO:0006561: proline biosynthetic process | 3.74E-03 |
| 60 | GO:0006751: glutathione catabolic process | 3.74E-03 |
| 61 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 3.74E-03 |
| 62 | GO:0007018: microtubule-based movement | 3.75E-03 |
| 63 | GO:0008654: phospholipid biosynthetic process | 4.02E-03 |
| 64 | GO:0042372: phylloquinone biosynthetic process | 4.50E-03 |
| 65 | GO:0009082: branched-chain amino acid biosynthetic process | 4.50E-03 |
| 66 | GO:0048280: vesicle fusion with Golgi apparatus | 4.50E-03 |
| 67 | GO:0009099: valine biosynthetic process | 4.50E-03 |
| 68 | GO:0009903: chloroplast avoidance movement | 4.50E-03 |
| 69 | GO:0030488: tRNA methylation | 4.50E-03 |
| 70 | GO:0010189: vitamin E biosynthetic process | 4.50E-03 |
| 71 | GO:0009088: threonine biosynthetic process | 4.50E-03 |
| 72 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 4.50E-03 |
| 73 | GO:0009648: photoperiodism | 4.50E-03 |
| 74 | GO:0016032: viral process | 4.60E-03 |
| 75 | GO:0015937: coenzyme A biosynthetic process | 5.32E-03 |
| 76 | GO:0035196: production of miRNAs involved in gene silencing by miRNA | 5.32E-03 |
| 77 | GO:0009395: phospholipid catabolic process | 5.32E-03 |
| 78 | GO:0043068: positive regulation of programmed cell death | 6.17E-03 |
| 79 | GO:0010078: maintenance of root meristem identity | 6.17E-03 |
| 80 | GO:0009416: response to light stimulus | 6.97E-03 |
| 81 | GO:0009097: isoleucine biosynthetic process | 7.08E-03 |
| 82 | GO:0006997: nucleus organization | 7.08E-03 |
| 83 | GO:0043562: cellular response to nitrogen levels | 7.08E-03 |
| 84 | GO:0010093: specification of floral organ identity | 7.08E-03 |
| 85 | GO:0048573: photoperiodism, flowering | 7.35E-03 |
| 86 | GO:0006189: 'de novo' IMP biosynthetic process | 8.04E-03 |
| 87 | GO:0006811: ion transport | 8.99E-03 |
| 88 | GO:0010018: far-red light signaling pathway | 9.03E-03 |
| 89 | GO:1900865: chloroplast RNA modification | 9.03E-03 |
| 90 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 9.03E-03 |
| 91 | GO:0010380: regulation of chlorophyll biosynthetic process | 9.03E-03 |
| 92 | GO:0010267: production of ta-siRNAs involved in RNA interference | 9.03E-03 |
| 93 | GO:0071577: zinc II ion transmembrane transport | 9.03E-03 |
| 94 | GO:0009098: leucine biosynthetic process | 9.03E-03 |
| 95 | GO:0048527: lateral root development | 9.43E-03 |
| 96 | GO:0010119: regulation of stomatal movement | 9.43E-03 |
| 97 | GO:0007623: circadian rhythm | 9.78E-03 |
| 98 | GO:0045490: pectin catabolic process | 9.78E-03 |
| 99 | GO:0006629: lipid metabolic process | 9.90E-03 |
| 100 | GO:0006896: Golgi to vacuole transport | 1.01E-02 |
| 101 | GO:0006535: cysteine biosynthetic process from serine | 1.01E-02 |
| 102 | GO:0009688: abscisic acid biosynthetic process | 1.01E-02 |
| 103 | GO:0009641: shade avoidance | 1.01E-02 |
| 104 | GO:0010192: mucilage biosynthetic process | 1.01E-02 |
| 105 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.12E-02 |
| 106 | GO:0006415: translational termination | 1.12E-02 |
| 107 | GO:0000272: polysaccharide catabolic process | 1.12E-02 |
| 108 | GO:0009750: response to fructose | 1.12E-02 |
| 109 | GO:0009684: indoleacetic acid biosynthetic process | 1.12E-02 |
| 110 | GO:0006631: fatty acid metabolic process | 1.23E-02 |
| 111 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.23E-02 |
| 112 | GO:0006790: sulfur compound metabolic process | 1.23E-02 |
| 113 | GO:0010588: cotyledon vascular tissue pattern formation | 1.34E-02 |
| 114 | GO:0009785: blue light signaling pathway | 1.34E-02 |
| 115 | GO:0009640: photomorphogenesis | 1.34E-02 |
| 116 | GO:0009767: photosynthetic electron transport chain | 1.34E-02 |
| 117 | GO:0010143: cutin biosynthetic process | 1.46E-02 |
| 118 | GO:0006541: glutamine metabolic process | 1.46E-02 |
| 119 | GO:0009933: meristem structural organization | 1.46E-02 |
| 120 | GO:0048467: gynoecium development | 1.46E-02 |
| 121 | GO:0009825: multidimensional cell growth | 1.59E-02 |
| 122 | GO:0019853: L-ascorbic acid biosynthetic process | 1.59E-02 |
| 123 | GO:0010030: positive regulation of seed germination | 1.59E-02 |
| 124 | GO:0046854: phosphatidylinositol phosphorylation | 1.59E-02 |
| 125 | GO:0006833: water transport | 1.71E-02 |
| 126 | GO:0000162: tryptophan biosynthetic process | 1.71E-02 |
| 127 | GO:0000027: ribosomal large subunit assembly | 1.85E-02 |
| 128 | GO:0007010: cytoskeleton organization | 1.85E-02 |
| 129 | GO:0010187: negative regulation of seed germination | 1.85E-02 |
| 130 | GO:0019344: cysteine biosynthetic process | 1.85E-02 |
| 131 | GO:0007017: microtubule-based process | 1.98E-02 |
| 132 | GO:0009723: response to ethylene | 2.05E-02 |
| 133 | GO:0003333: amino acid transmembrane transport | 2.12E-02 |
| 134 | GO:0048511: rhythmic process | 2.12E-02 |
| 135 | GO:0048367: shoot system development | 2.21E-02 |
| 136 | GO:0009814: defense response, incompatible interaction | 2.26E-02 |
| 137 | GO:0035428: hexose transmembrane transport | 2.26E-02 |
| 138 | GO:0071215: cellular response to abscisic acid stimulus | 2.40E-02 |
| 139 | GO:0042147: retrograde transport, endosome to Golgi | 2.70E-02 |
| 140 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 2.70E-02 |
| 141 | GO:0009742: brassinosteroid mediated signaling pathway | 2.73E-02 |
| 142 | GO:0000271: polysaccharide biosynthetic process | 2.85E-02 |
| 143 | GO:0080022: primary root development | 2.85E-02 |
| 144 | GO:0034220: ion transmembrane transport | 2.85E-02 |
| 145 | GO:0010087: phloem or xylem histogenesis | 2.85E-02 |
| 146 | GO:0042631: cellular response to water deprivation | 2.85E-02 |
| 147 | GO:0045489: pectin biosynthetic process | 3.01E-02 |
| 148 | GO:0009958: positive gravitropism | 3.01E-02 |
| 149 | GO:0006520: cellular amino acid metabolic process | 3.01E-02 |
| 150 | GO:0010305: leaf vascular tissue pattern formation | 3.01E-02 |
| 151 | GO:0010197: polar nucleus fusion | 3.01E-02 |
| 152 | GO:0010182: sugar mediated signaling pathway | 3.01E-02 |
| 153 | GO:0046323: glucose import | 3.01E-02 |
| 154 | GO:0009741: response to brassinosteroid | 3.01E-02 |
| 155 | GO:0006623: protein targeting to vacuole | 3.33E-02 |
| 156 | GO:0009791: post-embryonic development | 3.33E-02 |
| 157 | GO:0048825: cotyledon development | 3.33E-02 |
| 158 | GO:0009851: auxin biosynthetic process | 3.33E-02 |
| 159 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 3.50E-02 |
| 160 | GO:0006891: intra-Golgi vesicle-mediated transport | 3.50E-02 |
| 161 | GO:0010583: response to cyclopentenone | 3.67E-02 |
| 162 | GO:0009639: response to red or far red light | 4.01E-02 |
| 163 | GO:0006464: cellular protein modification process | 4.01E-02 |
| 164 | GO:0071805: potassium ion transmembrane transport | 4.19E-02 |
| 165 | GO:0000910: cytokinesis | 4.36E-02 |
| 166 | GO:0009627: systemic acquired resistance | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 2 | GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity | 0.00E+00 |
| 3 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 4 | GO:0010276: phytol kinase activity | 0.00E+00 |
| 5 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 6 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 7 | GO:1990534: thermospermine oxidase activity | 0.00E+00 |
| 8 | GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity | 0.00E+00 |
| 9 | GO:0004059: aralkylamine N-acetyltransferase activity | 0.00E+00 |
| 10 | GO:0000293: ferric-chelate reductase activity | 1.70E-04 |
| 11 | GO:0030570: pectate lyase activity | 2.54E-04 |
| 12 | GO:0010945: CoA pyrophosphatase activity | 3.47E-04 |
| 13 | GO:0019210: kinase inhibitor activity | 3.47E-04 |
| 14 | GO:0004328: formamidase activity | 3.47E-04 |
| 15 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 3.47E-04 |
| 16 | GO:0050139: nicotinate-N-glucosyltransferase activity | 3.47E-04 |
| 17 | GO:0008017: microtubule binding | 4.39E-04 |
| 18 | GO:0003777: microtubule motor activity | 6.04E-04 |
| 19 | GO:0008934: inositol monophosphate 1-phosphatase activity | 7.56E-04 |
| 20 | GO:0052833: inositol monophosphate 4-phosphatase activity | 7.56E-04 |
| 21 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 7.56E-04 |
| 22 | GO:0016630: protochlorophyllide reductase activity | 7.56E-04 |
| 23 | GO:0004512: inositol-3-phosphate synthase activity | 7.56E-04 |
| 24 | GO:0015172: acidic amino acid transmembrane transporter activity | 7.56E-04 |
| 25 | GO:0050017: L-3-cyanoalanine synthase activity | 7.56E-04 |
| 26 | GO:0017118: lipoyltransferase activity | 7.56E-04 |
| 27 | GO:0003839: gamma-glutamylcyclotransferase activity | 7.56E-04 |
| 28 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 7.56E-04 |
| 29 | GO:0004766: spermidine synthase activity | 7.56E-04 |
| 30 | GO:0052832: inositol monophosphate 3-phosphatase activity | 7.56E-04 |
| 31 | GO:0047372: acylglycerol lipase activity | 8.76E-04 |
| 32 | GO:0003913: DNA photolyase activity | 1.22E-03 |
| 33 | GO:0004148: dihydrolipoyl dehydrogenase activity | 1.22E-03 |
| 34 | GO:0004049: anthranilate synthase activity | 1.22E-03 |
| 35 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 1.22E-03 |
| 36 | GO:0003993: acid phosphatase activity | 1.62E-03 |
| 37 | GO:0003999: adenine phosphoribosyltransferase activity | 1.76E-03 |
| 38 | GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity | 1.76E-03 |
| 39 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 1.76E-03 |
| 40 | GO:0052656: L-isoleucine transaminase activity | 1.76E-03 |
| 41 | GO:0009882: blue light photoreceptor activity | 1.76E-03 |
| 42 | GO:0052654: L-leucine transaminase activity | 1.76E-03 |
| 43 | GO:0035198: miRNA binding | 1.76E-03 |
| 44 | GO:0052655: L-valine transaminase activity | 1.76E-03 |
| 45 | GO:0004072: aspartate kinase activity | 1.76E-03 |
| 46 | GO:0015175: neutral amino acid transmembrane transporter activity | 1.76E-03 |
| 47 | GO:0004084: branched-chain-amino-acid transaminase activity | 2.37E-03 |
| 48 | GO:0008409: 5'-3' exonuclease activity | 2.37E-03 |
| 49 | GO:0080032: methyl jasmonate esterase activity | 2.37E-03 |
| 50 | GO:0016846: carbon-sulfur lyase activity | 3.03E-03 |
| 51 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 3.03E-03 |
| 52 | GO:0001085: RNA polymerase II transcription factor binding | 3.49E-03 |
| 53 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 3.74E-03 |
| 54 | GO:0102229: amylopectin maltohydrolase activity | 3.74E-03 |
| 55 | GO:0000210: NAD+ diphosphatase activity | 3.74E-03 |
| 56 | GO:0042578: phosphoric ester hydrolase activity | 3.74E-03 |
| 57 | GO:0016208: AMP binding | 3.74E-03 |
| 58 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 3.74E-03 |
| 59 | GO:0004605: phosphatidate cytidylyltransferase activity | 3.74E-03 |
| 60 | GO:0016788: hydrolase activity, acting on ester bonds | 4.06E-03 |
| 61 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 4.50E-03 |
| 62 | GO:0016161: beta-amylase activity | 4.50E-03 |
| 63 | GO:0009927: histidine phosphotransfer kinase activity | 4.50E-03 |
| 64 | GO:0003730: mRNA 3'-UTR binding | 4.50E-03 |
| 65 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 4.50E-03 |
| 66 | GO:0004124: cysteine synthase activity | 4.50E-03 |
| 67 | GO:0043022: ribosome binding | 6.17E-03 |
| 68 | GO:0008173: RNA methyltransferase activity | 7.08E-03 |
| 69 | GO:0016829: lyase activity | 7.17E-03 |
| 70 | GO:0030247: polysaccharide binding | 7.35E-03 |
| 71 | GO:0003747: translation release factor activity | 8.04E-03 |
| 72 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 8.93E-03 |
| 73 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 9.43E-03 |
| 74 | GO:0003725: double-stranded RNA binding | 1.34E-02 |
| 75 | GO:0008081: phosphoric diester hydrolase activity | 1.34E-02 |
| 76 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.34E-02 |
| 77 | GO:0031072: heat shock protein binding | 1.34E-02 |
| 78 | GO:0000155: phosphorelay sensor kinase activity | 1.34E-02 |
| 79 | GO:0016491: oxidoreductase activity | 1.36E-02 |
| 80 | GO:0008131: primary amine oxidase activity | 1.46E-02 |
| 81 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.46E-02 |
| 82 | GO:0008146: sulfotransferase activity | 1.59E-02 |
| 83 | GO:0003887: DNA-directed DNA polymerase activity | 1.71E-02 |
| 84 | GO:0005385: zinc ion transmembrane transporter activity | 1.85E-02 |
| 85 | GO:0005528: FK506 binding | 1.85E-02 |
| 86 | GO:0015079: potassium ion transmembrane transporter activity | 1.98E-02 |
| 87 | GO:0008324: cation transmembrane transporter activity | 1.98E-02 |
| 88 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 2.12E-02 |
| 89 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 2.26E-02 |
| 90 | GO:0016874: ligase activity | 2.42E-02 |
| 91 | GO:0003727: single-stranded RNA binding | 2.55E-02 |
| 92 | GO:0008080: N-acetyltransferase activity | 3.01E-02 |
| 93 | GO:0005355: glucose transmembrane transporter activity | 3.17E-02 |
| 94 | GO:0010181: FMN binding | 3.17E-02 |
| 95 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.31E-02 |
| 96 | GO:0019901: protein kinase binding | 3.33E-02 |
| 97 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 3.66E-02 |
| 98 | GO:0046872: metal ion binding | 3.90E-02 |
| 99 | GO:0016791: phosphatase activity | 4.01E-02 |
| 100 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 4.19E-02 |
| 101 | GO:0016597: amino acid binding | 4.36E-02 |
| 102 | GO:0004672: protein kinase activity | 4.43E-02 |
| 103 | GO:0015250: water channel activity | 4.55E-02 |