GO Enrichment Analysis of Co-expressed Genes with
AT2G47450
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090706: specification of plant organ position | 0.00E+00 |
| 2 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 3 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 4 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 5 | GO:0046677: response to antibiotic | 0.00E+00 |
| 6 | GO:0017038: protein import | 0.00E+00 |
| 7 | GO:0009773: photosynthetic electron transport in photosystem I | 7.82E-08 |
| 8 | GO:0015979: photosynthesis | 8.86E-08 |
| 9 | GO:0009657: plastid organization | 1.33E-04 |
| 10 | GO:0043953: protein transport by the Tat complex | 1.50E-04 |
| 11 | GO:0000481: maturation of 5S rRNA | 1.50E-04 |
| 12 | GO:0065002: intracellular protein transmembrane transport | 1.50E-04 |
| 13 | GO:0034337: RNA folding | 1.50E-04 |
| 14 | GO:0010450: inflorescence meristem growth | 1.50E-04 |
| 15 | GO:0010205: photoinhibition | 1.96E-04 |
| 16 | GO:0034755: iron ion transmembrane transport | 3.42E-04 |
| 17 | GO:0050992: dimethylallyl diphosphate biosynthetic process | 3.42E-04 |
| 18 | GO:0080151: positive regulation of salicylic acid mediated signaling pathway | 3.42E-04 |
| 19 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 3.42E-04 |
| 20 | GO:0006094: gluconeogenesis | 3.54E-04 |
| 21 | GO:0010207: photosystem II assembly | 4.00E-04 |
| 22 | GO:0006810: transport | 4.05E-04 |
| 23 | GO:0006000: fructose metabolic process | 5.61E-04 |
| 24 | GO:0006013: mannose metabolic process | 5.61E-04 |
| 25 | GO:0006696: ergosterol biosynthetic process | 5.61E-04 |
| 26 | GO:0045165: cell fate commitment | 5.61E-04 |
| 27 | GO:0009735: response to cytokinin | 7.08E-04 |
| 28 | GO:0009800: cinnamic acid biosynthetic process | 8.03E-04 |
| 29 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 8.03E-04 |
| 30 | GO:0045727: positive regulation of translation | 1.06E-03 |
| 31 | GO:0015994: chlorophyll metabolic process | 1.06E-03 |
| 32 | GO:0006546: glycine catabolic process | 1.06E-03 |
| 33 | GO:0006542: glutamine biosynthetic process | 1.06E-03 |
| 34 | GO:0010109: regulation of photosynthesis | 1.06E-03 |
| 35 | GO:0019676: ammonia assimilation cycle | 1.06E-03 |
| 36 | GO:0010158: abaxial cell fate specification | 1.35E-03 |
| 37 | GO:0009247: glycolipid biosynthetic process | 1.35E-03 |
| 38 | GO:0006461: protein complex assembly | 1.35E-03 |
| 39 | GO:1902183: regulation of shoot apical meristem development | 1.35E-03 |
| 40 | GO:0000470: maturation of LSU-rRNA | 1.65E-03 |
| 41 | GO:0006559: L-phenylalanine catabolic process | 1.65E-03 |
| 42 | GO:1902456: regulation of stomatal opening | 1.65E-03 |
| 43 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.65E-03 |
| 44 | GO:0009635: response to herbicide | 1.65E-03 |
| 45 | GO:0042549: photosystem II stabilization | 1.65E-03 |
| 46 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.65E-03 |
| 47 | GO:0010027: thylakoid membrane organization | 1.88E-03 |
| 48 | GO:0009082: branched-chain amino acid biosynthetic process | 1.98E-03 |
| 49 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.98E-03 |
| 50 | GO:0009099: valine biosynthetic process | 1.98E-03 |
| 51 | GO:0010019: chloroplast-nucleus signaling pathway | 1.98E-03 |
| 52 | GO:0015995: chlorophyll biosynthetic process | 2.21E-03 |
| 53 | GO:0009772: photosynthetic electron transport in photosystem II | 2.33E-03 |
| 54 | GO:0009645: response to low light intensity stimulus | 2.33E-03 |
| 55 | GO:0018298: protein-chromophore linkage | 2.45E-03 |
| 56 | GO:0006402: mRNA catabolic process | 2.70E-03 |
| 57 | GO:0009850: auxin metabolic process | 2.70E-03 |
| 58 | GO:0006605: protein targeting | 2.70E-03 |
| 59 | GO:0019375: galactolipid biosynthetic process | 2.70E-03 |
| 60 | GO:0032508: DNA duplex unwinding | 2.70E-03 |
| 61 | GO:0006002: fructose 6-phosphate metabolic process | 3.08E-03 |
| 62 | GO:0009097: isoleucine biosynthetic process | 3.08E-03 |
| 63 | GO:0032544: plastid translation | 3.08E-03 |
| 64 | GO:0010093: specification of floral organ identity | 3.08E-03 |
| 65 | GO:0009699: phenylpropanoid biosynthetic process | 3.08E-03 |
| 66 | GO:0010206: photosystem II repair | 3.49E-03 |
| 67 | GO:2000024: regulation of leaf development | 3.49E-03 |
| 68 | GO:0000373: Group II intron splicing | 3.49E-03 |
| 69 | GO:0009658: chloroplast organization | 3.65E-03 |
| 70 | GO:0009638: phototropism | 3.91E-03 |
| 71 | GO:0010114: response to red light | 3.98E-03 |
| 72 | GO:0009644: response to high light intensity | 4.30E-03 |
| 73 | GO:0006949: syncytium formation | 4.35E-03 |
| 74 | GO:0009698: phenylpropanoid metabolic process | 4.80E-03 |
| 75 | GO:0019684: photosynthesis, light reaction | 4.80E-03 |
| 76 | GO:0009089: lysine biosynthetic process via diaminopimelate | 4.80E-03 |
| 77 | GO:0043085: positive regulation of catalytic activity | 4.80E-03 |
| 78 | GO:0006879: cellular iron ion homeostasis | 4.80E-03 |
| 79 | GO:0009750: response to fructose | 4.80E-03 |
| 80 | GO:0005983: starch catabolic process | 5.27E-03 |
| 81 | GO:0006364: rRNA processing | 5.35E-03 |
| 82 | GO:0009585: red, far-red light phototransduction | 5.35E-03 |
| 83 | GO:0005986: sucrose biosynthetic process | 5.75E-03 |
| 84 | GO:2000028: regulation of photoperiodism, flowering | 5.75E-03 |
| 85 | GO:0009767: photosynthetic electron transport chain | 5.75E-03 |
| 86 | GO:0009933: meristem structural organization | 6.25E-03 |
| 87 | GO:0006096: glycolytic process | 6.32E-03 |
| 88 | GO:0006412: translation | 6.49E-03 |
| 89 | GO:0006636: unsaturated fatty acid biosynthetic process | 7.30E-03 |
| 90 | GO:0032259: methylation | 7.44E-03 |
| 91 | GO:0009944: polarity specification of adaxial/abaxial axis | 7.84E-03 |
| 92 | GO:0006418: tRNA aminoacylation for protein translation | 8.40E-03 |
| 93 | GO:0007017: microtubule-based process | 8.40E-03 |
| 94 | GO:0009768: photosynthesis, light harvesting in photosystem I | 8.40E-03 |
| 95 | GO:0061077: chaperone-mediated protein folding | 8.97E-03 |
| 96 | GO:0010017: red or far-red light signaling pathway | 9.56E-03 |
| 97 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.02E-02 |
| 98 | GO:0006284: base-excision repair | 1.08E-02 |
| 99 | GO:0042744: hydrogen peroxide catabolic process | 1.09E-02 |
| 100 | GO:0006979: response to oxidative stress | 1.10E-02 |
| 101 | GO:0016117: carotenoid biosynthetic process | 1.14E-02 |
| 102 | GO:0010154: fruit development | 1.27E-02 |
| 103 | GO:0009958: positive gravitropism | 1.27E-02 |
| 104 | GO:0009646: response to absence of light | 1.34E-02 |
| 105 | GO:0009451: RNA modification | 1.35E-02 |
| 106 | GO:0000302: response to reactive oxygen species | 1.47E-02 |
| 107 | GO:0010583: response to cyclopentenone | 1.55E-02 |
| 108 | GO:0030163: protein catabolic process | 1.62E-02 |
| 109 | GO:0010090: trichome morphogenesis | 1.62E-02 |
| 110 | GO:0009567: double fertilization forming a zygote and endosperm | 1.69E-02 |
| 111 | GO:0009828: plant-type cell wall loosening | 1.69E-02 |
| 112 | GO:0009409: response to cold | 1.72E-02 |
| 113 | GO:0071805: potassium ion transmembrane transport | 1.76E-02 |
| 114 | GO:0042128: nitrate assimilation | 2.07E-02 |
| 115 | GO:0016311: dephosphorylation | 2.23E-02 |
| 116 | GO:0048481: plant ovule development | 2.31E-02 |
| 117 | GO:0010218: response to far red light | 2.48E-02 |
| 118 | GO:0007568: aging | 2.56E-02 |
| 119 | GO:0034599: cellular response to oxidative stress | 2.83E-02 |
| 120 | GO:0006855: drug transmembrane transport | 3.66E-02 |
| 121 | GO:0009664: plant-type cell wall organization | 3.85E-02 |
| 122 | GO:0006397: mRNA processing | 3.90E-02 |
| 123 | GO:0006813: potassium ion transport | 4.05E-02 |
| 124 | GO:0008152: metabolic process | 4.12E-02 |
| 125 | GO:0006417: regulation of translation | 4.36E-02 |
| 126 | GO:0009909: regulation of flower development | 4.36E-02 |
| 127 | GO:0009626: plant-type hypersensitive response | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 2 | GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity | 0.00E+00 |
| 3 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 4 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 5 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 6 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 7 | GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity | 0.00E+00 |
| 8 | GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | 0.00E+00 |
| 9 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 10 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 11 | GO:0019843: rRNA binding | 3.03E-08 |
| 12 | GO:0005528: FK506 binding | 4.45E-07 |
| 13 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.47E-06 |
| 14 | GO:0051996: squalene synthase activity | 1.50E-04 |
| 15 | GO:0045485: omega-6 fatty acid desaturase activity | 1.50E-04 |
| 16 | GO:0052638: indole-3-butyrate beta-glucosyltransferase activity | 1.50E-04 |
| 17 | GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | 1.50E-04 |
| 18 | GO:0003984: acetolactate synthase activity | 1.50E-04 |
| 19 | GO:0046906: tetrapyrrole binding | 1.50E-04 |
| 20 | GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity | 3.42E-04 |
| 21 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 3.42E-04 |
| 22 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 3.42E-04 |
| 23 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 3.42E-04 |
| 24 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 3.42E-04 |
| 25 | GO:0047746: chlorophyllase activity | 3.42E-04 |
| 26 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 3.42E-04 |
| 27 | GO:0004047: aminomethyltransferase activity | 3.42E-04 |
| 28 | GO:0008266: poly(U) RNA binding | 4.00E-04 |
| 29 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 5.61E-04 |
| 30 | GO:0045548: phenylalanine ammonia-lyase activity | 5.61E-04 |
| 31 | GO:0002161: aminoacyl-tRNA editing activity | 5.61E-04 |
| 32 | GO:0035250: UDP-galactosyltransferase activity | 8.03E-04 |
| 33 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 1.06E-03 |
| 34 | GO:0004737: pyruvate decarboxylase activity | 1.06E-03 |
| 35 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.06E-03 |
| 36 | GO:0051538: 3 iron, 4 sulfur cluster binding | 1.35E-03 |
| 37 | GO:0004356: glutamate-ammonia ligase activity | 1.35E-03 |
| 38 | GO:0008725: DNA-3-methyladenine glycosylase activity | 1.35E-03 |
| 39 | GO:0004332: fructose-bisphosphate aldolase activity | 1.65E-03 |
| 40 | GO:0004130: cytochrome-c peroxidase activity | 1.65E-03 |
| 41 | GO:0042578: phosphoric ester hydrolase activity | 1.65E-03 |
| 42 | GO:0030976: thiamine pyrophosphate binding | 1.65E-03 |
| 43 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.98E-03 |
| 44 | GO:0004559: alpha-mannosidase activity | 1.98E-03 |
| 45 | GO:0016168: chlorophyll binding | 1.99E-03 |
| 46 | GO:0019899: enzyme binding | 2.33E-03 |
| 47 | GO:0003735: structural constituent of ribosome | 2.79E-03 |
| 48 | GO:0005381: iron ion transmembrane transporter activity | 3.91E-03 |
| 49 | GO:0000049: tRNA binding | 5.27E-03 |
| 50 | GO:0003723: RNA binding | 5.80E-03 |
| 51 | GO:0031409: pigment binding | 7.30E-03 |
| 52 | GO:0015079: potassium ion transmembrane transporter activity | 8.40E-03 |
| 53 | GO:0022891: substrate-specific transmembrane transporter activity | 1.02E-02 |
| 54 | GO:0016787: hydrolase activity | 1.07E-02 |
| 55 | GO:0003727: single-stranded RNA binding | 1.08E-02 |
| 56 | GO:0004812: aminoacyl-tRNA ligase activity | 1.14E-02 |
| 57 | GO:0050662: coenzyme binding | 1.34E-02 |
| 58 | GO:0048038: quinone binding | 1.47E-02 |
| 59 | GO:0008194: UDP-glycosyltransferase activity | 1.48E-02 |
| 60 | GO:0003743: translation initiation factor activity | 1.54E-02 |
| 61 | GO:0008483: transaminase activity | 1.76E-02 |
| 62 | GO:0005200: structural constituent of cytoskeleton | 1.76E-02 |
| 63 | GO:0008168: methyltransferase activity | 1.97E-02 |
| 64 | GO:0004601: peroxidase activity | 2.05E-02 |
| 65 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 2.23E-02 |
| 66 | GO:0008236: serine-type peptidase activity | 2.23E-02 |
| 67 | GO:0015238: drug transmembrane transporter activity | 2.40E-02 |
| 68 | GO:0030145: manganese ion binding | 2.56E-02 |
| 69 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 2.83E-02 |
| 70 | GO:0004185: serine-type carboxypeptidase activity | 3.28E-02 |
| 71 | GO:0043621: protein self-association | 3.47E-02 |
| 72 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.47E-02 |
| 73 | GO:0005509: calcium ion binding | 3.56E-02 |
| 74 | GO:0003924: GTPase activity | 3.74E-02 |
| 75 | GO:0004519: endonuclease activity | 4.06E-02 |
| 76 | GO:0045330: aspartyl esterase activity | 4.36E-02 |
| 77 | GO:0003824: catalytic activity | 4.41E-02 |
| 78 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 4.88E-02 |
| 79 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 4.88E-02 |
| 80 | GO:0030599: pectinesterase activity | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043235: receptor complex | 0.00E+00 |
| 2 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 1.09E-33 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 1.84E-25 |
| 5 | GO:0009534: chloroplast thylakoid | 2.66E-23 |
| 6 | GO:0009570: chloroplast stroma | 1.67E-18 |
| 7 | GO:0009941: chloroplast envelope | 7.80E-18 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 1.55E-14 |
| 9 | GO:0009579: thylakoid | 1.04E-10 |
| 10 | GO:0030095: chloroplast photosystem II | 2.02E-07 |
| 11 | GO:0009533: chloroplast stromal thylakoid | 9.13E-07 |
| 12 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.92E-06 |
| 13 | GO:0009523: photosystem II | 3.05E-06 |
| 14 | GO:0009654: photosystem II oxygen evolving complex | 2.82E-05 |
| 15 | GO:0031977: thylakoid lumen | 3.22E-05 |
| 16 | GO:0019898: extrinsic component of membrane | 8.98E-05 |
| 17 | GO:0031969: chloroplast membrane | 1.37E-04 |
| 18 | GO:0009782: photosystem I antenna complex | 1.50E-04 |
| 19 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.50E-04 |
| 20 | GO:0009547: plastid ribosome | 1.50E-04 |
| 21 | GO:0031361: integral component of thylakoid membrane | 1.50E-04 |
| 22 | GO:0010287: plastoglobule | 1.71E-04 |
| 23 | GO:0000312: plastid small ribosomal subunit | 4.00E-04 |
| 24 | GO:0033281: TAT protein transport complex | 5.61E-04 |
| 25 | GO:0042646: plastid nucleoid | 8.03E-04 |
| 26 | GO:0009706: chloroplast inner membrane | 1.06E-03 |
| 27 | GO:0016020: membrane | 1.77E-03 |
| 28 | GO:0030529: intracellular ribonucleoprotein complex | 1.88E-03 |
| 29 | GO:0016363: nuclear matrix | 1.98E-03 |
| 30 | GO:0005840: ribosome | 3.08E-03 |
| 31 | GO:0045298: tubulin complex | 3.49E-03 |
| 32 | GO:0005763: mitochondrial small ribosomal subunit | 3.49E-03 |
| 33 | GO:0032040: small-subunit processome | 5.27E-03 |
| 34 | GO:0000311: plastid large ribosomal subunit | 5.27E-03 |
| 35 | GO:0030076: light-harvesting complex | 6.77E-03 |
| 36 | GO:0042651: thylakoid membrane | 8.40E-03 |
| 37 | GO:0043231: intracellular membrane-bounded organelle | 8.90E-03 |
| 38 | GO:0022626: cytosolic ribosome | 1.54E-02 |
| 39 | GO:0015934: large ribosomal subunit | 2.56E-02 |