gene detail

Gene description

TAIR ID: AT2G43560

Short description: FKBP-like peptidyl-prolyl cis-trans isomerase family protein

Pathogen responsiveness: -0.62

General responsiveness: 2.60

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G030494

Wheat:

TAAFFX.114768.1.S1_AT

GO biological process

unkown

GO cellular component

chloroplast thylakoid, chloroplast stroma, chloroplast thylakoid lumen, chloroplast, thylakoid lumen, thylakoid

GO molecular function

peptidyl-prolyl cis-trans isomerase activity

Protein domain

Pfam	PF00254, FKBP-type peptidyl-prolyl cis-trans isomerase

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_EDS16_GO  view
GSE26679_EDR1_GC  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

9 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.58	1.82E-10
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.57	4.14E-09
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.50	5.17E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.95	1.69E-10
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	-1.66	1.88E-05
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.44	9.45E-08
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.84	1.32E-07
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-1.53	2.05E-06
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-1.74	9.70E-08