Gene: AT2G42870
     

Gene description


TAIR ID: AT2G42870

Short description: phy rapidly regulated 1

Pathogen responsiveness: 0.21

General responsiveness: -0.36

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


negative regulation of transcription, DNA-templated, regulation of growth, transcription, developmental process, shade avoidance, brassinosteroid mediated signaling pathway


GO cellular component


nucleus


GO molecular function


protein homodimerization activity, transcription cofactor activity


Protein domain


No domain annotation

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT5G11260, AT4G36920, AT1G24260, AT2G20180, AT5G61850, AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 20 (Top10%)

click to view PPI network

Differentially expressed condition


23 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d1.771.38E-05
GSE18329Col, wrky72_1, controlCol, wrky72_1, Hpa noco2 96 h-1.751.37E-10
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.511.16E-06
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.538.33E-07
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.547.18E-07
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.823.10E-08
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-3.313.39E-06
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-1.942.83E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.813.88E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.886.68E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-3.935.32E-17
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-3.796.84E-17
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-3.944.19E-17
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-3.421.13E-12
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.911.59E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-4.083.36E-14
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h-3.421.59E-12
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-1.934.56E-07
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h-1.528.61E-04
GSE5520Col, WT, control 24 hCol, WT, PsDC3118 Cor- 24 h-2.313.46E-08
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-2.903.73E-10
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.975.07E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min-1.734.91E-02






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