gene detail

Gene description

TAIR ID: AT2G39970

Short description: Mitochondrial substrate carrier family protein

Pathogen responsiveness: -1.75

General responsiveness: -3.26

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G540403

Wheat: No orthologous gene

GO biological process

NAD transport, transport, mitochondrial transport, regulation of peroxisome size, nucleoside transport

GO cellular component

peroxisome, peroxisomal membrane, mitochondrial inner membrane, vacuolar membrane, integral component of peroxisomal membrane, glyoxysomal membrane, mitochondrion

GO molecular function

AMP transmembrane transporter activity, coenzyme A transmembrane transporter activity, antiporter activity, NAD transporter activity, FMN transmembrane transporter activity, ATP transmembrane transporter activity, FAD transmembrane transporter activity, ADP transmembrane transporter activity

Protein domain

Pfam	PF00153, Mitochondrial carrier protein

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04146: Peroxisome

Transcriptional regulation

Regulator:
AT3G24050

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.15	1.25E-11
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.87	1.03E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	1.59	1.08E-12