co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G39970

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010055: atrichoblast differentiation	0.00E+00
2	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
3	GO:0010401: pectic galactan metabolic process	0.00E+00
4	GO:0071435: potassium ion export	0.00E+00
5	GO:0006489: dolichyl diphosphate biosynthetic process	0.00E+00
6	GO:0001881: receptor recycling	0.00E+00
7	GO:0072722: response to amitrole	0.00E+00
8	GO:0090630: activation of GTPase activity	1.21E-05
9	GO:0006511: ubiquitin-dependent protein catabolic process	1.06E-04
10	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	1.13E-04
11	GO:0042176: regulation of protein catabolic process	1.13E-04
12	GO:0060918: auxin transport	1.13E-04
13	GO:0010227: floral organ abscission	1.52E-04
14	GO:0045454: cell redox homeostasis	1.85E-04
15	GO:0016337: single organismal cell-cell adhesion	2.70E-04
16	GO:0007292: female gamete generation	2.70E-04
17	GO:0097502: mannosylation	2.70E-04
18	GO:0019628: urate catabolic process	2.70E-04
19	GO:0006680: glucosylceramide catabolic process	2.70E-04
20	GO:0031338: regulation of vesicle fusion	2.70E-04
21	GO:0006474: N-terminal protein amino acid acetylation	2.70E-04
22	GO:0006144: purine nucleobase metabolic process	2.70E-04
23	GO:0032107: regulation of response to nutrient levels	2.70E-04
24	GO:0035266: meristem growth	2.70E-04
25	GO:0008202: steroid metabolic process	4.56E-04
26	GO:0006024: glycosaminoglycan biosynthetic process	5.94E-04
27	GO:0052541: plant-type cell wall cellulose metabolic process	5.94E-04
28	GO:0051788: response to misfolded protein	5.94E-04
29	GO:1902000: homogentisate catabolic process	5.94E-04
30	GO:0018345: protein palmitoylation	5.94E-04
31	GO:1901703: protein localization involved in auxin polar transport	5.94E-04
32	GO:0019725: cellular homeostasis	5.94E-04
33	GO:0048209: regulation of vesicle targeting, to, from or within Golgi	5.94E-04
34	GO:0051252: regulation of RNA metabolic process	5.94E-04
35	GO:0015012: heparan sulfate proteoglycan biosynthetic process	5.94E-04
36	GO:0042814: monopolar cell growth	5.94E-04
37	GO:0046939: nucleotide phosphorylation	5.94E-04
38	GO:0010102: lateral root morphogenesis	7.96E-04
39	GO:0010540: basipetal auxin transport	8.95E-04
40	GO:0046686: response to cadmium ion	9.58E-04
41	GO:0018342: protein prenylation	9.62E-04
42	GO:0010272: response to silver ion	9.62E-04
43	GO:0009072: aromatic amino acid family metabolic process	9.62E-04
44	GO:0060968: regulation of gene silencing	9.62E-04
45	GO:0008333: endosome to lysosome transport	9.62E-04
46	GO:0010253: UDP-rhamnose biosynthetic process	9.62E-04
47	GO:0051176: positive regulation of sulfur metabolic process	9.62E-04
48	GO:0010186: positive regulation of cellular defense response	9.62E-04
49	GO:0007031: peroxisome organization	9.99E-04
50	GO:0072334: UDP-galactose transmembrane transport	1.38E-03
51	GO:0048577: negative regulation of short-day photoperiodism, flowering	1.38E-03
52	GO:0000187: activation of MAPK activity	1.38E-03
53	GO:0016998: cell wall macromolecule catabolic process	1.48E-03
54	GO:0060548: negative regulation of cell death	1.84E-03
55	GO:1903830: magnesium ion transmembrane transport	1.84E-03
56	GO:0006661: phosphatidylinositol biosynthetic process	1.84E-03
57	GO:0000919: cell plate assembly	1.84E-03
58	GO:1990937: xylan acetylation	1.84E-03
59	GO:0051603: proteolysis involved in cellular protein catabolic process	2.02E-03
60	GO:0006665: sphingolipid metabolic process	2.35E-03
61	GO:0032957: inositol trisphosphate metabolic process	2.35E-03
62	GO:0097428: protein maturation by iron-sulfur cluster transfer	2.35E-03
63	GO:0010183: pollen tube guidance	2.79E-03
64	GO:0048232: male gamete generation	2.90E-03
65	GO:0043248: proteasome assembly	2.90E-03
66	GO:0010315: auxin efflux	2.90E-03
67	GO:0003006: developmental process involved in reproduction	2.90E-03
68	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	2.90E-03
69	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	2.90E-03
70	GO:0048827: phyllome development	2.90E-03
71	GO:0006891: intra-Golgi vesicle-mediated transport	2.98E-03
72	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.49E-03
73	GO:0009554: megasporogenesis	3.49E-03
74	GO:0009567: double fertilization forming a zygote and endosperm	3.61E-03
75	GO:0006914: autophagy	3.61E-03
76	GO:0042742: defense response to bacterium	3.81E-03
77	GO:0015937: coenzyme A biosynthetic process	4.12E-03
78	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	4.12E-03
79	GO:0015693: magnesium ion transport	4.12E-03
80	GO:0080027: response to herbivore	4.12E-03
81	GO:0009615: response to virus	4.30E-03
82	GO:0010078: maintenance of root meristem identity	4.77E-03
83	GO:0006102: isocitrate metabolic process	4.77E-03
84	GO:0009627: systemic acquired resistance	4.80E-03
85	GO:0007186: G-protein coupled receptor signaling pathway	5.47E-03
86	GO:0009657: plastid organization	5.47E-03
87	GO:0015031: protein transport	6.11E-03
88	GO:0006499: N-terminal protein myristoylation	6.19E-03
89	GO:0009407: toxin catabolic process	6.19E-03
90	GO:0007338: single fertilization	6.20E-03
91	GO:0015780: nucleotide-sugar transport	6.20E-03
92	GO:0048527: lateral root development	6.49E-03
93	GO:0090332: stomatal closure	6.96E-03
94	GO:0048354: mucilage biosynthetic process involved in seed coat development	6.96E-03
95	GO:0006099: tricarboxylic acid cycle	7.44E-03
96	GO:0051555: flavonol biosynthetic process	7.75E-03
97	GO:0006032: chitin catabolic process	7.75E-03
98	GO:0048829: root cap development	7.75E-03
99	GO:0010015: root morphogenesis	8.58E-03
100	GO:0072593: reactive oxygen species metabolic process	8.58E-03
101	GO:0043085: positive regulation of catalytic activity	8.58E-03
102	GO:0000272: polysaccharide catabolic process	8.58E-03
103	GO:0006790: sulfur compound metabolic process	9.44E-03
104	GO:0006807: nitrogen compound metabolic process	1.03E-02
105	GO:0055046: microgametogenesis	1.03E-02
106	GO:0000165: MAPK cascade	1.11E-02
107	GO:0007034: vacuolar transport	1.12E-02
108	GO:0009933: meristem structural organization	1.12E-02
109	GO:0009266: response to temperature stimulus	1.12E-02
110	GO:0009225: nucleotide-sugar metabolic process	1.22E-02
111	GO:0010039: response to iron ion	1.22E-02
112	GO:0090351: seedling development	1.22E-02
113	GO:0070588: calcium ion transmembrane transport	1.22E-02
114	GO:0046854: phosphatidylinositol phosphorylation	1.22E-02
115	GO:0006486: protein glycosylation	1.24E-02
116	GO:0034976: response to endoplasmic reticulum stress	1.32E-02
117	GO:0009555: pollen development	1.34E-02
118	GO:0006417: regulation of translation	1.37E-02
119	GO:0006487: protein N-linked glycosylation	1.42E-02
120	GO:0006874: cellular calcium ion homeostasis	1.52E-02
121	GO:0009814: defense response, incompatible interaction	1.73E-02
122	GO:0016226: iron-sulfur cluster assembly	1.73E-02
123	GO:0030433: ubiquitin-dependent ERAD pathway	1.73E-02
124	GO:0080092: regulation of pollen tube growth	1.73E-02
125	GO:0071456: cellular response to hypoxia	1.73E-02
126	GO:0009624: response to nematode	1.77E-02
127	GO:0006886: intracellular protein transport	1.82E-02
128	GO:0006012: galactose metabolic process	1.84E-02
129	GO:0055085: transmembrane transport	1.92E-02
130	GO:0042127: regulation of cell proliferation	1.95E-02
131	GO:0016117: carotenoid biosynthetic process	2.07E-02
132	GO:0042147: retrograde transport, endosome to Golgi	2.07E-02
133	GO:0010051: xylem and phloem pattern formation	2.19E-02
134	GO:0010087: phloem or xylem histogenesis	2.19E-02
135	GO:0010118: stomatal movement	2.19E-02
136	GO:0006662: glycerol ether metabolic process	2.31E-02
137	GO:0048868: pollen tube development	2.31E-02
138	GO:0009058: biosynthetic process	2.34E-02
139	GO:0048544: recognition of pollen	2.43E-02
140	GO:0006623: protein targeting to vacuole	2.55E-02
141	GO:0008654: phospholipid biosynthetic process	2.55E-02
142	GO:0055072: iron ion homeostasis	2.55E-02
143	GO:0032502: developmental process	2.81E-02
144	GO:0006413: translational initiation	2.85E-02
145	GO:0030163: protein catabolic process	2.94E-02
146	GO:0010150: leaf senescence	3.06E-02
147	GO:0006904: vesicle docking involved in exocytosis	3.21E-02
148	GO:0000910: cytokinesis	3.34E-02
149	GO:0006906: vesicle fusion	3.77E-02
150	GO:0009651: response to salt stress	3.87E-02
151	GO:0006468: protein phosphorylation	3.90E-02
152	GO:0006888: ER to Golgi vesicle-mediated transport	3.91E-02
153	GO:0006950: response to stress	3.91E-02
154	GO:0055114: oxidation-reduction process	4.02E-02
155	GO:0009817: defense response to fungus, incompatible interaction	4.21E-02
156	GO:0008219: cell death	4.21E-02
157	GO:0010311: lateral root formation	4.36E-02
158	GO:0009834: plant-type secondary cell wall biogenesis	4.51E-02
159	GO:0006811: ion transport	4.51E-02
160	GO:0009910: negative regulation of flower development	4.66E-02
161	GO:0009631: cold acclimation	4.66E-02
162	GO:0010043: response to zinc ion	4.66E-02
163	GO:0035556: intracellular signal transduction	4.95E-02
164	GO:0045087: innate immune response	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0051766: inositol trisphosphate kinase activity	0.00E+00
2	GO:0051670: inulinase activity	0.00E+00
3	GO:0052925: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity	0.00E+00
4	GO:0000033: alpha-1,3-mannosyltransferase activity	0.00E+00
5	GO:0051765: inositol tetrakisphosphate kinase activity	0.00E+00
6	GO:0052873: FMN reductase (NADPH) activity	0.00E+00
7	GO:0004846: urate oxidase activity	0.00E+00
8	GO:0008752: FMN reductase activity	0.00E+00
9	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
10	GO:1990585: hydroxyproline O-arabinosyltransferase activity	3.35E-06
11	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	2.72E-05
12	GO:0004601: peroxidase activity	7.21E-05
13	GO:0004298: threonine-type endopeptidase activity	1.17E-04
14	GO:0005544: calcium-dependent phospholipid binding	2.58E-04
15	GO:0016853: isomerase activity	2.64E-04
16	GO:2001227: quercitrin binding	2.70E-04
17	GO:0000824: inositol tetrakisphosphate 3-kinase activity	2.70E-04
18	GO:0003975: UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity	2.70E-04
19	GO:0051669: fructan beta-fructosidase activity	2.70E-04
20	GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity	2.70E-04
21	GO:0047326: inositol tetrakisphosphate 5-kinase activity	2.70E-04
22	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	2.70E-04
23	GO:0048037: cofactor binding	2.70E-04
24	GO:0004348: glucosylceramidase activity	2.70E-04
25	GO:0004633: phosphopantothenoylcysteine decarboxylase activity	2.70E-04
26	GO:0031219: levanase activity	2.70E-04
27	GO:0052917: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity	2.70E-04
28	GO:0019786: Atg8-specific protease activity	2.70E-04
29	GO:2001147: camalexin binding	2.70E-04
30	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	2.70E-04
31	GO:0008142: oxysterol binding	3.19E-04
32	GO:0008047: enzyme activator activity	5.32E-04
33	GO:0030234: enzyme regulator activity	5.32E-04
34	GO:0010280: UDP-L-rhamnose synthase activity	5.94E-04
35	GO:0032934: sterol binding	5.94E-04
36	GO:0008428: ribonuclease inhibitor activity	5.94E-04
37	GO:0004775: succinate-CoA ligase (ADP-forming) activity	5.94E-04
38	GO:0019779: Atg8 activating enzyme activity	5.94E-04
39	GO:0050377: UDP-glucose 4,6-dehydratase activity	5.94E-04
40	GO:0051980: iron-nicotianamine transmembrane transporter activity	5.94E-04
41	GO:0008517: folic acid transporter activity	5.94E-04
42	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	5.94E-04
43	GO:0004776: succinate-CoA ligase (GDP-forming) activity	5.94E-04
44	GO:0008963: phospho-N-acetylmuramoyl-pentapeptide-transferase activity	5.94E-04
45	GO:0004596: peptide alpha-N-acetyltransferase activity	5.94E-04
46	GO:0008460: dTDP-glucose 4,6-dehydratase activity	5.94E-04
47	GO:0008559: xenobiotic-transporting ATPase activity	6.14E-04
48	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	9.62E-04
49	GO:0004848: ureidoglycolate hydrolase activity	9.62E-04
50	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	9.62E-04
51	GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity	9.62E-04
52	GO:0047325: inositol tetrakisphosphate 1-kinase activity	9.62E-04
53	GO:0008061: chitin binding	9.99E-04
54	GO:0019201: nucleotide kinase activity	1.38E-03
55	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.38E-03
56	GO:0019776: Atg8 ligase activity	1.84E-03
57	GO:0016004: phospholipase activator activity	1.84E-03
58	GO:0009916: alternative oxidase activity	1.84E-03
59	GO:0004301: epoxide hydrolase activity	1.84E-03
60	GO:0047134: protein-disulfide reductase activity	2.08E-03
61	GO:0005459: UDP-galactose transmembrane transporter activity	2.35E-03
62	GO:0008948: oxaloacetate decarboxylase activity	2.35E-03
63	GO:0017137: Rab GTPase binding	2.35E-03
64	GO:0000104: succinate dehydrogenase activity	2.35E-03
65	GO:0004791: thioredoxin-disulfide reductase activity	2.60E-03
66	GO:0010181: FMN binding	2.60E-03
67	GO:1990538: xylan O-acetyltransferase activity	2.90E-03
68	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	2.90E-03
69	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	2.90E-03
70	GO:0036402: proteasome-activating ATPase activity	2.90E-03
71	GO:0051920: peroxiredoxin activity	3.49E-03
72	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.49E-03
73	GO:0004017: adenylate kinase activity	3.49E-03
74	GO:0004602: glutathione peroxidase activity	3.49E-03
75	GO:0005338: nucleotide-sugar transmembrane transporter activity	4.12E-03
76	GO:0008320: protein transmembrane transporter activity	4.12E-03
77	GO:0043295: glutathione binding	4.12E-03
78	GO:0004034: aldose 1-epimerase activity	4.77E-03
79	GO:0004708: MAP kinase kinase activity	4.77E-03
80	GO:0004714: transmembrane receptor protein tyrosine kinase activity	4.77E-03
81	GO:0016209: antioxidant activity	4.77E-03
82	GO:0005096: GTPase activator activity	5.89E-03
83	GO:0004568: chitinase activity	7.75E-03
84	GO:0008794: arsenate reductase (glutaredoxin) activity	8.58E-03
85	GO:0008327: methyl-CpG binding	8.58E-03
86	GO:0004364: glutathione transferase activity	8.81E-03
87	GO:0015198: oligopeptide transporter activity	9.44E-03
88	GO:0004565: beta-galactosidase activity	1.03E-02
89	GO:0015095: magnesium ion transmembrane transporter activity	1.03E-02
90	GO:0004175: endopeptidase activity	1.12E-02
91	GO:0017025: TBP-class protein binding	1.22E-02
92	GO:0005524: ATP binding	1.22E-02
93	GO:0004970: ionotropic glutamate receptor activity	1.22E-02
94	GO:0005217: intracellular ligand-gated ion channel activity	1.22E-02
95	GO:0004190: aspartic-type endopeptidase activity	1.22E-02
96	GO:0001046: core promoter sequence-specific DNA binding	1.42E-02
97	GO:0035251: UDP-glucosyltransferase activity	1.62E-02
98	GO:0004540: ribonuclease activity	1.62E-02
99	GO:0022857: transmembrane transporter activity	1.67E-02
100	GO:0016874: ligase activity	1.67E-02
101	GO:0015035: protein disulfide oxidoreductase activity	1.82E-02
102	GO:0003756: protein disulfide isomerase activity	1.95E-02
103	GO:0008080: N-acetyltransferase activity	2.31E-02
104	GO:0001085: RNA polymerase II transcription factor binding	2.31E-02
105	GO:0003713: transcription coactivator activity	2.31E-02
106	GO:0005199: structural constituent of cell wall	2.31E-02
107	GO:0046873: metal ion transmembrane transporter activity	2.31E-02
108	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.53E-02
109	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.94E-02
110	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.21E-02
111	GO:0004674: protein serine/threonine kinase activity	3.41E-02
112	GO:0003743: translation initiation factor activity	3.57E-02
113	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.88E-02
114	GO:0004806: triglyceride lipase activity	3.91E-02
115	GO:0030247: polysaccharide binding	3.91E-02
116	GO:0003824: catalytic activity	4.35E-02
117	GO:0016787: hydrolase activity	4.45E-02
118	GO:0000287: magnesium ion binding	4.63E-02
119	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	4.66E-02