co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G39970

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071327: cellular response to trehalose stimulus	0.00E+00
2	GO:0043048: dolichyl monophosphate biosynthetic process	0.00E+00
3	GO:1900367: positive regulation of defense response to insect	0.00E+00
4	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
5	GO:0042430: indole-containing compound metabolic process	0.00E+00
6	GO:0010360: negative regulation of anion channel activity	0.00E+00
7	GO:2000541: positive regulation of protein geranylgeranylation	0.00E+00
8	GO:0009626: plant-type hypersensitive response	8.94E-06
9	GO:0006468: protein phosphorylation	5.30E-05
10	GO:1902361: mitochondrial pyruvate transmembrane transport	5.94E-05
11	GO:1901183: positive regulation of camalexin biosynthetic process	5.94E-05
12	GO:0009270: response to humidity	5.94E-05
13	GO:0012501: programmed cell death	8.25E-05
14	GO:0010167: response to nitrate	1.25E-04
15	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	1.44E-04
16	GO:0010618: aerenchyma formation	1.44E-04
17	GO:0044419: interspecies interaction between organisms	1.44E-04
18	GO:0006850: mitochondrial pyruvate transport	1.44E-04
19	GO:0015865: purine nucleotide transport	1.44E-04
20	GO:0019725: cellular homeostasis	1.44E-04
21	GO:0045793: positive regulation of cell size	2.46E-04
22	GO:0010186: positive regulation of cellular defense response	2.46E-04
23	GO:0055074: calcium ion homeostasis	2.46E-04
24	GO:0046902: regulation of mitochondrial membrane permeability	3.57E-04
25	GO:0010150: leaf senescence	4.44E-04
26	GO:0060548: negative regulation of cell death	4.78E-04
27	GO:0010483: pollen tube reception	4.78E-04
28	GO:0080142: regulation of salicylic acid biosynthetic process	4.78E-04
29	GO:0018344: protein geranylgeranylation	6.05E-04
30	GO:0010225: response to UV-C	6.05E-04
31	GO:0034052: positive regulation of plant-type hypersensitive response	6.05E-04
32	GO:0030041: actin filament polymerization	6.05E-04
33	GO:0046283: anthocyanin-containing compound metabolic process	6.05E-04
34	GO:0006561: proline biosynthetic process	7.40E-04
35	GO:0010942: positive regulation of cell death	7.40E-04
36	GO:0010256: endomembrane system organization	7.40E-04
37	GO:0009817: defense response to fungus, incompatible interaction	7.40E-04
38	GO:0002238: response to molecule of fungal origin	7.40E-04
39	GO:0010310: regulation of hydrogen peroxide metabolic process	8.82E-04
40	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	8.82E-04
41	GO:0010044: response to aluminum ion	1.03E-03
42	GO:1900056: negative regulation of leaf senescence	1.03E-03
43	GO:0044550: secondary metabolite biosynthetic process	1.11E-03
44	GO:0043068: positive regulation of programmed cell death	1.18E-03
45	GO:2000070: regulation of response to water deprivation	1.18E-03
46	GO:2000031: regulation of salicylic acid mediated signaling pathway	1.35E-03
47	GO:0009699: phenylpropanoid biosynthetic process	1.35E-03
48	GO:0010120: camalexin biosynthetic process	1.35E-03
49	GO:0010204: defense response signaling pathway, resistance gene-independent	1.35E-03
50	GO:0007338: single fertilization	1.52E-03
51	GO:0051865: protein autoubiquitination	1.52E-03
52	GO:0010112: regulation of systemic acquired resistance	1.52E-03
53	GO:0009751: response to salicylic acid	1.59E-03
54	GO:0042742: defense response to bacterium	1.62E-03
55	GO:1900426: positive regulation of defense response to bacterium	1.69E-03
56	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	1.69E-03
57	GO:0008202: steroid metabolic process	1.69E-03
58	GO:0006952: defense response	1.72E-03
59	GO:0015770: sucrose transport	2.07E-03
60	GO:0002213: defense response to insect	2.27E-03
61	GO:0015706: nitrate transport	2.27E-03
62	GO:0010105: negative regulation of ethylene-activated signaling pathway	2.27E-03
63	GO:0009718: anthocyanin-containing compound biosynthetic process	2.47E-03
64	GO:0009266: response to temperature stimulus	2.68E-03
65	GO:0002237: response to molecule of bacterial origin	2.68E-03
66	GO:0010053: root epidermal cell differentiation	2.89E-03
67	GO:0042343: indole glucosinolate metabolic process	2.89E-03
68	GO:0005992: trehalose biosynthetic process	3.34E-03
69	GO:0030150: protein import into mitochondrial matrix	3.34E-03
70	GO:0006874: cellular calcium ion homeostasis	3.57E-03
71	GO:0035556: intracellular signal transduction	3.57E-03
72	GO:0098542: defense response to other organism	3.81E-03
73	GO:0031348: negative regulation of defense response	4.05E-03
74	GO:0071456: cellular response to hypoxia	4.05E-03
75	GO:0035428: hexose transmembrane transport	4.05E-03
76	GO:2000022: regulation of jasmonic acid mediated signaling pathway	4.05E-03
77	GO:0009625: response to insect	4.30E-03
78	GO:0009617: response to bacterium	4.53E-03
79	GO:0042391: regulation of membrane potential	5.07E-03
80	GO:0046323: glucose import	5.34E-03
81	GO:0048544: recognition of pollen	5.61E-03
82	GO:0008654: phospholipid biosynthetic process	5.89E-03
83	GO:0007264: small GTPase mediated signal transduction	6.46E-03
84	GO:0055114: oxidation-reduction process	7.01E-03
85	GO:0009567: double fertilization forming a zygote and endosperm	7.05E-03
86	GO:0010200: response to chitin	7.51E-03
87	GO:0001666: response to hypoxia	7.97E-03
88	GO:0009816: defense response to bacterium, incompatible interaction	8.28E-03
89	GO:0009627: systemic acquired resistance	8.60E-03
90	GO:0042128: nitrate assimilation	8.60E-03
91	GO:0008219: cell death	9.59E-03
92	GO:0032259: methylation	1.03E-02
93	GO:0048527: lateral root development	1.06E-02
94	GO:0009408: response to heat	1.07E-02
95	GO:0006839: mitochondrial transport	1.24E-02
96	GO:0042542: response to hydrogen peroxide	1.32E-02
97	GO:0051707: response to other organism	1.35E-02
98	GO:0008643: carbohydrate transport	1.43E-02
99	GO:0031347: regulation of defense response	1.55E-02
100	GO:0042538: hyperosmotic salinity response	1.59E-02
101	GO:0006486: protein glycosylation	1.67E-02
102	GO:0009909: regulation of flower development	1.80E-02
103	GO:0009738: abscisic acid-activated signaling pathway	1.85E-02
104	GO:0009737: response to abscisic acid	2.13E-02
105	GO:0018105: peptidyl-serine phosphorylation	2.19E-02
106	GO:0055085: transmembrane transport	2.43E-02
107	GO:0006457: protein folding	2.48E-02
108	GO:0009845: seed germination	2.67E-02
109	GO:0040008: regulation of growth	3.07E-02
110	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.44E-02
111	GO:0007166: cell surface receptor signaling pathway	3.49E-02
112	GO:0006470: protein dephosphorylation	3.49E-02
113	GO:0006970: response to osmotic stress	4.56E-02
114	GO:0009860: pollen tube growth	4.56E-02
115	GO:0015031: protein transport	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0004168: dolichol kinase activity	0.00E+00
2	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
3	GO:0005092: GDP-dissociation inhibitor activity	0.00E+00
4	GO:0004674: protein serine/threonine kinase activity	7.01E-05
5	GO:0032934: sterol binding	1.44E-04
6	GO:0016301: kinase activity	1.52E-04
7	GO:0005093: Rab GDP-dissociation inhibitor activity	2.46E-04
8	GO:0050833: pyruvate transmembrane transporter activity	2.46E-04
9	GO:0005471: ATP:ADP antiporter activity	6.05E-04
10	GO:0015145: monosaccharide transmembrane transporter activity	6.05E-04
11	GO:0017137: Rab GTPase binding	6.05E-04
12	GO:0004683: calmodulin-dependent protein kinase activity	6.71E-04
13	GO:0004605: phosphatidate cytidylyltransferase activity	7.40E-04
14	GO:0004029: aldehyde dehydrogenase (NAD) activity	7.40E-04
15	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	8.51E-04
16	GO:0051920: peroxiredoxin activity	8.82E-04
17	GO:0008506: sucrose:proton symporter activity	1.03E-03
18	GO:0005516: calmodulin binding	1.04E-03
19	GO:0016209: antioxidant activity	1.18E-03
20	GO:0005544: calcium-dependent phospholipid binding	1.18E-03
21	GO:0008142: oxysterol binding	1.35E-03
22	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.37E-03
23	GO:0015112: nitrate transmembrane transporter activity	1.69E-03
24	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	1.69E-03
25	GO:0045309: protein phosphorylated amino acid binding	1.69E-03
26	GO:0004713: protein tyrosine kinase activity	1.88E-03
27	GO:0019904: protein domain specific binding	2.07E-03
28	GO:0015266: protein channel activity	2.47E-03
29	GO:0030552: cAMP binding	2.89E-03
30	GO:0030553: cGMP binding	2.89E-03
31	GO:0005217: intracellular ligand-gated ion channel activity	2.89E-03
32	GO:0004970: ionotropic glutamate receptor activity	2.89E-03
33	GO:0005216: ion channel activity	3.57E-03
34	GO:0022891: substrate-specific transmembrane transporter activity	4.30E-03
35	GO:0030246: carbohydrate binding	4.85E-03
36	GO:0005249: voltage-gated potassium channel activity	5.07E-03
37	GO:0030551: cyclic nucleotide binding	5.07E-03
38	GO:0019825: oxygen binding	5.21E-03
39	GO:0005355: glucose transmembrane transporter activity	5.61E-03
40	GO:0008168: methyltransferase activity	5.65E-03
41	GO:0005524: ATP binding	5.94E-03
42	GO:0050660: flavin adenine dinucleotide binding	6.78E-03
43	GO:0005506: iron ion binding	7.99E-03
44	GO:0009931: calcium-dependent protein serine/threonine kinase activity	8.60E-03
45	GO:0004806: triglyceride lipase activity	8.92E-03
46	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	9.25E-03
47	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	9.59E-03
48	GO:0005096: GTPase activator activity	9.93E-03
49	GO:0009055: electron carrier activity	1.15E-02
50	GO:0000987: core promoter proximal region sequence-specific DNA binding	1.17E-02
51	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.20E-02
52	GO:0004364: glutathione transferase activity	1.32E-02
53	GO:0020037: heme binding	1.46E-02
54	GO:0016298: lipase activity	1.71E-02
55	GO:0043565: sequence-specific DNA binding	1.91E-02
56	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.01E-02
57	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.01E-02
58	GO:0003779: actin binding	2.10E-02
59	GO:0051082: unfolded protein binding	2.15E-02
60	GO:0015035: protein disulfide oxidoreductase activity	2.19E-02
61	GO:0016758: transferase activity, transferring hexosyl groups	2.47E-02
62	GO:0004252: serine-type endopeptidase activity	2.72E-02
63	GO:0015144: carbohydrate transmembrane transporter activity	2.86E-02
64	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.02E-02
65	GO:0005351: sugar:proton symporter activity	3.12E-02
66	GO:0008194: UDP-glycosyltransferase activity	3.44E-02
67	GO:0005509: calcium ion binding	3.57E-02
68	GO:0004601: peroxidase activity	4.33E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	7.69E-06
2	GO:0031305: integral component of mitochondrial inner membrane	2.51E-05
3	GO:0005911: cell-cell junction	5.94E-05
4	GO:0005783: endoplasmic reticulum	1.93E-04
5	GO:0005968: Rab-protein geranylgeranyltransferase complex	3.57E-04
6	GO:0005788: endoplasmic reticulum lumen	6.05E-04
7	GO:0030176: integral component of endoplasmic reticulum membrane	2.89E-03
8	GO:0005744: mitochondrial inner membrane presequence translocase complex	4.55E-03
9	GO:0016021: integral component of membrane	5.63E-03
10	GO:0016592: mediator complex	6.46E-03
11	GO:0005887: integral component of plasma membrane	1.46E-02
12	GO:0031966: mitochondrial membrane	1.59E-02
13	GO:0005635: nuclear envelope	1.76E-02
14	GO:0005759: mitochondrial matrix	2.97E-02
15	GO:0009705: plant-type vacuole membrane	3.17E-02