Gene: AT2G38140
     


Gene description


TAIR ID: AT2G38140

Short description: plastid-specific ribosomal protein 4

Pathogen responsiveness: -0.15

General responsiveness: 1.56

Orthologous


Rice:

OS05G0186000  

Maize:

GRMZM2G058250  

Wheat: No orthologous gene

GO biological process


translation, plastid translation


GO cellular component


chloroplast envelope, ribosome, chloroplast, chloroplast stroma, plastid


GO molecular function


unkown


Protein domain


PfamPF17067, Ribosomal protein S31e

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G14230, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


20 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.741.39E-03
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.993.49E-04
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.681.65E-03
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-3.963.33E-11
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.587.70E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-1.584.32E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.112.76E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.679.52E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.562.15E-07
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.201.43E-09
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h-1.692.20E-02
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.641.49E-05
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.538.53E-04
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-1.944.63E-10
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.536.34E-07
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.723.38E-08
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.093.84E-11
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-1.716.78E-08
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-1.561.95E-06
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.643.60E-06






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.