gene detail

Gene description

TAIR ID: AT2G31360

Short description: 16:0delta9 desaturase 2

Pathogen responsiveness: -1.10

General responsiveness: -0.75

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

oxidation-reduction process, very long-chain fatty acid biosynthetic process, unsaturated fatty acid biosynthetic process

GO cellular component

endoplasmic reticulum, endoplasmic reticulum membrane, integral component of membrane

GO molecular function

oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water

Protein domain

Pfam	PF00487, Fatty acid desaturase

Metabolic pathway

PWY-782: glycolipid desaturation

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT5G61850, AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 35 (Top5%)

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_EDS16_GO  view
GSE26679_EDR1_GC  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

9 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.50	5.14E-05
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	1.64	1.12E-08
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	1.98	3.09E-10
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.93	5.39E-10
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	2.46	3.61E-12
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.53	1.57E-02
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.77	3.66E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-1.83	2.34E-15
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.57	3.65E-02