gene detail

Gene description

TAIR ID: AT2G26930

Short description: 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase

Pathogen responsiveness: -1.20

General responsiveness: -0.14

Orthologous

Rice:

OS01G0802100

Maize:

GRMZM5G859195

Wheat:

TA.8080.1.A1_AT

GO biological process

terpenoid biosynthetic process, phosphorylation, isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway

GO cellular component

chloroplast stroma, chloroplast

GO molecular function

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity, ATP binding

Protein domain

Pfam	PF08544, GHMP kinases C terminal
Pfam	PF00288, GHMP kinases N terminal domain

Metabolic pathway

NONMEVIPP-PWY: methylerythritol phosphate pathway
PWY-5121: superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP)

KEGG pathway

PATH:ath00900: Terpenoid backbone biosynthesis

Transcriptional regulation

Regulator:
AT1G62300, AT4G31550

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.38	3.55E-11
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.75	4.54E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.96	2.94E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.11	1.17E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.71	1.92E-12