GO Enrichment Analysis of Co-expressed Genes with
AT2G26930
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 2 | GO:0042407: cristae formation | 0.00E+00 |
| 3 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 4 | GO:0060416: response to growth hormone | 0.00E+00 |
| 5 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 6 | GO:0006642: triglyceride mobilization | 0.00E+00 |
| 7 | GO:0032544: plastid translation | 3.36E-07 |
| 8 | GO:0006438: valyl-tRNA aminoacylation | 7.07E-05 |
| 9 | GO:0046166: glyceraldehyde-3-phosphate biosynthetic process | 7.07E-05 |
| 10 | GO:0009443: pyridoxal 5'-phosphate salvage | 7.07E-05 |
| 11 | GO:1903409: reactive oxygen species biosynthetic process | 7.07E-05 |
| 12 | GO:1904966: positive regulation of vitamin E biosynthetic process | 7.07E-05 |
| 13 | GO:1904964: positive regulation of phytol biosynthetic process | 7.07E-05 |
| 14 | GO:0006412: translation | 1.65E-04 |
| 15 | GO:0006423: cysteinyl-tRNA aminoacylation | 1.70E-04 |
| 16 | GO:0080148: negative regulation of response to water deprivation | 1.70E-04 |
| 17 | GO:0006568: tryptophan metabolic process | 1.70E-04 |
| 18 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.70E-04 |
| 19 | GO:0006954: inflammatory response | 2.86E-04 |
| 20 | GO:0090391: granum assembly | 2.86E-04 |
| 21 | GO:0019563: glycerol catabolic process | 2.86E-04 |
| 22 | GO:0006518: peptide metabolic process | 2.86E-04 |
| 23 | GO:0051604: protein maturation | 2.86E-04 |
| 24 | GO:0032504: multicellular organism reproduction | 2.86E-04 |
| 25 | GO:0016556: mRNA modification | 4.15E-04 |
| 26 | GO:0010239: chloroplast mRNA processing | 4.15E-04 |
| 27 | GO:0006749: glutathione metabolic process | 5.53E-04 |
| 28 | GO:0006564: L-serine biosynthetic process | 7.00E-04 |
| 29 | GO:0010027: thylakoid membrane organization | 7.13E-04 |
| 30 | GO:0009658: chloroplast organization | 1.01E-03 |
| 31 | GO:1901259: chloroplast rRNA processing | 1.02E-03 |
| 32 | GO:0042254: ribosome biogenesis | 1.04E-03 |
| 33 | GO:0048527: lateral root development | 1.05E-03 |
| 34 | GO:0006821: chloride transport | 1.19E-03 |
| 35 | GO:0006353: DNA-templated transcription, termination | 1.37E-03 |
| 36 | GO:0006875: cellular metal ion homeostasis | 1.37E-03 |
| 37 | GO:0009704: de-etiolation | 1.37E-03 |
| 38 | GO:0017004: cytochrome complex assembly | 1.56E-03 |
| 39 | GO:0043067: regulation of programmed cell death | 1.97E-03 |
| 40 | GO:0006096: glycolytic process | 2.31E-03 |
| 41 | GO:0006415: translational termination | 2.41E-03 |
| 42 | GO:0043085: positive regulation of catalytic activity | 2.41E-03 |
| 43 | GO:0009773: photosynthetic electron transport in photosystem I | 2.41E-03 |
| 44 | GO:0045037: protein import into chloroplast stroma | 2.64E-03 |
| 45 | GO:0010628: positive regulation of gene expression | 2.88E-03 |
| 46 | GO:0006094: gluconeogenesis | 2.88E-03 |
| 47 | GO:0010020: chloroplast fission | 3.12E-03 |
| 48 | GO:0019253: reductive pentose-phosphate cycle | 3.12E-03 |
| 49 | GO:0006418: tRNA aminoacylation for protein translation | 4.17E-03 |
| 50 | GO:0040008: regulation of growth | 4.55E-03 |
| 51 | GO:0016226: iron-sulfur cluster assembly | 4.73E-03 |
| 52 | GO:0009306: protein secretion | 5.32E-03 |
| 53 | GO:0080022: primary root development | 5.93E-03 |
| 54 | GO:0006662: glycerol ether metabolic process | 6.24E-03 |
| 55 | GO:0010197: polar nucleus fusion | 6.24E-03 |
| 56 | GO:0015986: ATP synthesis coupled proton transport | 6.56E-03 |
| 57 | GO:0080167: response to karrikin | 9.13E-03 |
| 58 | GO:0015979: photosynthesis | 1.04E-02 |
| 59 | GO:0018298: protein-chromophore linkage | 1.13E-02 |
| 60 | GO:0009407: toxin catabolic process | 1.21E-02 |
| 61 | GO:0034599: cellular response to oxidative stress | 1.37E-02 |
| 62 | GO:0015031: protein transport | 1.48E-02 |
| 63 | GO:0051707: response to other organism | 1.59E-02 |
| 64 | GO:0009636: response to toxic substance | 1.73E-02 |
| 65 | GO:0055085: transmembrane transport | 3.05E-02 |
| 66 | GO:0006457: protein folding | 3.11E-02 |
| 67 | GO:0009793: embryo development ending in seed dormancy | 3.14E-02 |
| 68 | GO:0006413: translational initiation | 3.55E-02 |
| 69 | GO:0009451: RNA modification | 3.79E-02 |
| 70 | GO:0010468: regulation of gene expression | 4.23E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 2 | GO:0019843: rRNA binding | 2.89E-05 |
| 3 | GO:0003735: structural constituent of ribosome | 6.23E-05 |
| 4 | GO:0015088: copper uptake transmembrane transporter activity | 7.07E-05 |
| 5 | GO:0004832: valine-tRNA ligase activity | 7.07E-05 |
| 6 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 7.07E-05 |
| 7 | GO:0004807: triose-phosphate isomerase activity | 7.07E-05 |
| 8 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 7.07E-05 |
| 9 | GO:0001530: lipopolysaccharide binding | 7.07E-05 |
| 10 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.70E-04 |
| 11 | GO:0004817: cysteine-tRNA ligase activity | 1.70E-04 |
| 12 | GO:0004148: dihydrolipoyl dehydrogenase activity | 2.86E-04 |
| 13 | GO:0070402: NADPH binding | 2.86E-04 |
| 14 | GO:0016149: translation release factor activity, codon specific | 4.15E-04 |
| 15 | GO:0008097: 5S rRNA binding | 4.15E-04 |
| 16 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 4.15E-04 |
| 17 | GO:0043495: protein anchor | 5.53E-04 |
| 18 | GO:0004040: amidase activity | 7.00E-04 |
| 19 | GO:0005247: voltage-gated chloride channel activity | 8.57E-04 |
| 20 | GO:0080030: methyl indole-3-acetate esterase activity | 8.57E-04 |
| 21 | GO:0019899: enzyme binding | 1.19E-03 |
| 22 | GO:0004033: aldo-keto reductase (NADP) activity | 1.37E-03 |
| 23 | GO:0003747: translation release factor activity | 1.76E-03 |
| 24 | GO:0005381: iron ion transmembrane transporter activity | 1.97E-03 |
| 25 | GO:0008047: enzyme activator activity | 2.19E-03 |
| 26 | GO:0031072: heat shock protein binding | 2.88E-03 |
| 27 | GO:0051536: iron-sulfur cluster binding | 3.89E-03 |
| 28 | GO:0022891: substrate-specific transmembrane transporter activity | 5.02E-03 |
| 29 | GO:0047134: protein-disulfide reductase activity | 5.62E-03 |
| 30 | GO:0004812: aminoacyl-tRNA ligase activity | 5.62E-03 |
| 31 | GO:0042802: identical protein binding | 6.05E-03 |
| 32 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 6.24E-03 |
| 33 | GO:0003713: transcription coactivator activity | 6.24E-03 |
| 34 | GO:0008080: N-acetyltransferase activity | 6.24E-03 |
| 35 | GO:0004791: thioredoxin-disulfide reductase activity | 6.56E-03 |
| 36 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 7.90E-03 |
| 37 | GO:0016597: amino acid binding | 8.97E-03 |
| 38 | GO:0016168: chlorophyll binding | 9.71E-03 |
| 39 | GO:0008236: serine-type peptidase activity | 1.09E-02 |
| 40 | GO:0004222: metalloendopeptidase activity | 1.21E-02 |
| 41 | GO:0004519: endonuclease activity | 1.47E-02 |
| 42 | GO:0004364: glutathione transferase activity | 1.55E-02 |
| 43 | GO:0043621: protein self-association | 1.68E-02 |
| 44 | GO:0005198: structural molecule activity | 1.73E-02 |
| 45 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.77E-02 |
| 46 | GO:0051287: NAD binding | 1.82E-02 |
| 47 | GO:0051082: unfolded protein binding | 2.53E-02 |
| 48 | GO:0015035: protein disulfide oxidoreductase activity | 2.58E-02 |
| 49 | GO:0016758: transferase activity, transferring hexosyl groups | 2.91E-02 |
| 50 | GO:0008565: protein transporter activity | 3.37E-02 |
| 51 | GO:0005525: GTP binding | 3.94E-02 |
| 52 | GO:0008194: UDP-glycosyltransferase activity | 4.04E-02 |
| 53 | GO:0003743: translation initiation factor activity | 4.16E-02 |
| 54 | GO:0008168: methyltransferase activity | 4.95E-02 |
| 55 | GO:0003723: RNA binding | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 5.58E-32 |
| 2 | GO:0009570: chloroplast stroma | 2.14E-20 |
| 3 | GO:0009941: chloroplast envelope | 1.40E-11 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 1.00E-07 |
| 5 | GO:0005840: ribosome | 9.20E-06 |
| 6 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 7.07E-05 |
| 7 | GO:0042651: thylakoid membrane | 2.22E-04 |
| 8 | GO:0033281: TAT protein transport complex | 2.86E-04 |
| 9 | GO:0005640: nuclear outer membrane | 2.86E-04 |
| 10 | GO:0031897: Tic complex | 5.53E-04 |
| 11 | GO:0009526: plastid envelope | 5.53E-04 |
| 12 | GO:0055035: plastid thylakoid membrane | 7.00E-04 |
| 13 | GO:0034707: chloride channel complex | 8.57E-04 |
| 14 | GO:0016363: nuclear matrix | 1.02E-03 |
| 15 | GO:0009579: thylakoid | 1.04E-03 |
| 16 | GO:0015934: large ribosomal subunit | 1.05E-03 |
| 17 | GO:0000311: plastid large ribosomal subunit | 2.64E-03 |
| 18 | GO:0009543: chloroplast thylakoid lumen | 3.46E-03 |
| 19 | GO:0009532: plastid stroma | 4.44E-03 |
| 20 | GO:0009534: chloroplast thylakoid | 5.66E-03 |
| 21 | GO:0009523: photosystem II | 6.89E-03 |
| 22 | GO:0009536: plastid | 1.41E-02 |
| 23 | GO:0043231: intracellular membrane-bounded organelle | 1.49E-02 |
| 24 | GO:0022626: cytosolic ribosome | 2.30E-02 |
| 25 | GO:0009706: chloroplast inner membrane | 2.53E-02 |
| 26 | GO:0005615: extracellular space | 4.04E-02 |