co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G26930

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006849: plasma membrane pyruvate transport	0.00E+00
2	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
3	GO:0015995: chlorophyll biosynthetic process	4.52E-11
4	GO:1901259: chloroplast rRNA processing	4.51E-05
5	GO:0042254: ribosome biogenesis	5.05E-05
6	GO:0032544: plastid translation	9.94E-05
7	GO:0015979: photosynthesis	1.03E-04
8	GO:0006783: heme biosynthetic process	1.22E-04
9	GO:0000476: maturation of 4.5S rRNA	1.23E-04
10	GO:0000967: rRNA 5'-end processing	1.23E-04
11	GO:0009090: homoserine biosynthetic process	1.23E-04
12	GO:0010028: xanthophyll cycle	1.23E-04
13	GO:0034337: RNA folding	1.23E-04
14	GO:0006782: protoporphyrinogen IX biosynthetic process	1.75E-04
15	GO:0009773: photosynthetic electron transport in photosystem I	2.05E-04
16	GO:0010353: response to trehalose	2.86E-04
17	GO:0016122: xanthophyll metabolic process	2.86E-04
18	GO:0030388: fructose 1,6-bisphosphate metabolic process	2.86E-04
19	GO:0010270: photosystem II oxygen evolving complex assembly	2.86E-04
20	GO:0034470: ncRNA processing	2.86E-04
21	GO:0010207: photosystem II assembly	3.07E-04
22	GO:0006412: translation	3.60E-04
23	GO:0009735: response to cytokinin	4.38E-04
24	GO:0006418: tRNA aminoacylation for protein translation	4.71E-04
25	GO:0006518: peptide metabolic process	4.72E-04
26	GO:0006000: fructose metabolic process	4.72E-04
27	GO:0009067: aspartate family amino acid biosynthetic process	6.76E-04
28	GO:0006020: inositol metabolic process	6.76E-04
29	GO:0071484: cellular response to light intensity	6.76E-04
30	GO:0051085: chaperone mediated protein folding requiring cofactor	6.76E-04
31	GO:0006021: inositol biosynthetic process	8.97E-04
32	GO:0006109: regulation of carbohydrate metabolic process	8.97E-04
33	GO:0015994: chlorophyll metabolic process	8.97E-04
34	GO:0006656: phosphatidylcholine biosynthetic process	1.13E-03
35	GO:0055114: oxidation-reduction process	1.14E-03
36	GO:1902456: regulation of stomatal opening	1.39E-03
37	GO:0010190: cytochrome b6f complex assembly	1.39E-03
38	GO:0006828: manganese ion transport	1.39E-03
39	GO:0046855: inositol phosphate dephosphorylation	1.39E-03
40	GO:0009854: oxidative photosynthetic carbon pathway	1.66E-03
41	GO:0009088: threonine biosynthetic process	1.66E-03
42	GO:0009955: adaxial/abaxial pattern specification	1.66E-03
43	GO:0042026: protein refolding	1.66E-03
44	GO:0009610: response to symbiotic fungus	1.95E-03
45	GO:0009772: photosynthetic electron transport in photosystem II	1.95E-03
46	GO:0010196: nonphotochemical quenching	1.95E-03
47	GO:0005978: glycogen biosynthetic process	2.26E-03
48	GO:0009642: response to light intensity	2.26E-03
49	GO:0006353: DNA-templated transcription, termination	2.26E-03
50	GO:0006002: fructose 6-phosphate metabolic process	2.58E-03
51	GO:0010206: photosystem II repair	2.91E-03
52	GO:0006754: ATP biosynthetic process	2.91E-03
53	GO:0009409: response to cold	3.01E-03
54	GO:0009086: methionine biosynthetic process	3.26E-03
55	GO:0009641: shade avoidance	3.62E-03
56	GO:0009089: lysine biosynthetic process via diaminopimelate	4.00E-03
57	GO:0043085: positive regulation of catalytic activity	4.00E-03
58	GO:0006816: calcium ion transport	4.00E-03
59	GO:0006415: translational termination	4.00E-03
60	GO:0045454: cell redox homeostasis	4.29E-03
61	GO:0006790: sulfur compound metabolic process	4.39E-03
62	GO:0005983: starch catabolic process	4.39E-03
63	GO:0018107: peptidyl-threonine phosphorylation	4.79E-03
64	GO:0006094: gluconeogenesis	4.79E-03
65	GO:0005986: sucrose biosynthetic process	4.79E-03
66	GO:0010223: secondary shoot formation	5.20E-03
67	GO:0019253: reductive pentose-phosphate cycle	5.20E-03
68	GO:0032259: methylation	5.30E-03
69	GO:0046854: phosphatidylinositol phosphorylation	5.63E-03
70	GO:0005985: sucrose metabolic process	5.63E-03
71	GO:0051017: actin filament bundle assembly	6.51E-03
72	GO:0000027: ribosomal large subunit assembly	6.51E-03
73	GO:0009768: photosynthesis, light harvesting in photosystem I	6.98E-03
74	GO:0061077: chaperone-mediated protein folding	7.45E-03
75	GO:0016226: iron-sulfur cluster assembly	7.93E-03
76	GO:0007005: mitochondrion organization	7.93E-03
77	GO:0006633: fatty acid biosynthetic process	9.17E-03
78	GO:0006662: glycerol ether metabolic process	1.05E-02
79	GO:0015986: ATP synthesis coupled proton transport	1.11E-02
80	GO:0006814: sodium ion transport	1.11E-02
81	GO:0019252: starch biosynthetic process	1.16E-02
82	GO:1901657: glycosyl compound metabolic process	1.34E-02
83	GO:0010027: thylakoid membrane organization	1.58E-02
84	GO:0006457: protein folding	1.61E-02
85	GO:0009627: systemic acquired resistance	1.71E-02
86	GO:0048481: plant ovule development	1.91E-02
87	GO:0008219: cell death	1.91E-02
88	GO:0007568: aging	2.12E-02
89	GO:0009631: cold acclimation	2.12E-02
90	GO:0009853: photorespiration	2.26E-02
91	GO:0034599: cellular response to oxidative stress	2.34E-02
92	GO:0006631: fatty acid metabolic process	2.56E-02
93	GO:0009408: response to heat	2.87E-02
94	GO:0042538: hyperosmotic salinity response	3.19E-02
95	GO:0006364: rRNA processing	3.35E-02
96	GO:0043086: negative regulation of catalytic activity	3.78E-02
97	GO:0018105: peptidyl-serine phosphorylation	4.40E-02
98	GO:0006396: RNA processing	4.40E-02
99	GO:0046686: response to cadmium ion	4.87E-02

Rank	GO Term	Adjusted P value
1	GO:0052667: phosphomethylethanolamine N-methyltransferase activity	0.00E+00
2	GO:0008887: glycerate kinase activity	0.00E+00
3	GO:0080082: esculin beta-glucosidase activity	0.00E+00
4	GO:0046408: chlorophyll synthetase activity	0.00E+00
5	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
6	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
7	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
8	GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity	0.00E+00
9	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
10	GO:0016631: enoyl-[acyl-carrier-protein] reductase activity	0.00E+00
11	GO:0046422: violaxanthin de-epoxidase activity	0.00E+00
12	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
13	GO:0004567: beta-mannosidase activity	0.00E+00
14	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
15	GO:0004853: uroporphyrinogen decarboxylase activity	0.00E+00
16	GO:0019843: rRNA binding	3.28E-10
17	GO:0003735: structural constituent of ribosome	1.59E-05
18	GO:0080079: cellobiose glucosidase activity	1.23E-04
19	GO:0050521: alpha-glucan, water dikinase activity	1.23E-04
20	GO:0018708: thiol S-methyltransferase activity	2.86E-04
21	GO:0016630: protochlorophyllide reductase activity	2.86E-04
22	GO:0000234: phosphoethanolamine N-methyltransferase activity	2.86E-04
23	GO:0052832: inositol monophosphate 3-phosphatase activity	2.86E-04
24	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	2.86E-04
25	GO:0008934: inositol monophosphate 1-phosphatase activity	2.86E-04
26	GO:0052833: inositol monophosphate 4-phosphatase activity	2.86E-04
27	GO:0004412: homoserine dehydrogenase activity	2.86E-04
28	GO:0008967: phosphoglycolate phosphatase activity	2.86E-04
29	GO:0010277: chlorophyllide a oxygenase [overall] activity	4.72E-04
30	GO:0002161: aminoacyl-tRNA editing activity	4.72E-04
31	GO:0050833: pyruvate transmembrane transporter activity	4.72E-04
32	GO:0016149: translation release factor activity, codon specific	6.76E-04
33	GO:0008508: bile acid:sodium symporter activity	6.76E-04
34	GO:0004072: aspartate kinase activity	6.76E-04
35	GO:0019201: nucleotide kinase activity	6.76E-04
36	GO:0016851: magnesium chelatase activity	6.76E-04
37	GO:0004812: aminoacyl-tRNA ligase activity	7.21E-04
38	GO:0016491: oxidoreductase activity	7.25E-04
39	GO:0008878: glucose-1-phosphate adenylyltransferase activity	8.97E-04
40	GO:0003959: NADPH dehydrogenase activity	1.13E-03
41	GO:0004017: adenylate kinase activity	1.66E-03
42	GO:0051920: peroxiredoxin activity	1.66E-03
43	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.66E-03
44	GO:0004222: metalloendopeptidase activity	2.07E-03
45	GO:0004525: ribonuclease III activity	2.26E-03
46	GO:0016209: antioxidant activity	2.26E-03
47	GO:0004033: aldo-keto reductase (NADP) activity	2.26E-03
48	GO:0003993: acid phosphatase activity	2.49E-03
49	GO:0003747: translation release factor activity	2.91E-03
50	GO:0005384: manganese ion transmembrane transporter activity	3.26E-03
51	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.56E-03
52	GO:0030234: enzyme regulator activity	3.62E-03
53	GO:0008047: enzyme activator activity	3.62E-03
54	GO:0044183: protein binding involved in protein folding	4.00E-03
55	GO:0047372: acylglycerol lipase activity	4.00E-03
56	GO:0000049: tRNA binding	4.39E-03
57	GO:0015095: magnesium ion transmembrane transporter activity	4.79E-03
58	GO:0031072: heat shock protein binding	4.79E-03
59	GO:0008266: poly(U) RNA binding	5.20E-03
60	GO:0051082: unfolded protein binding	5.83E-03
61	GO:0031409: pigment binding	6.06E-03
62	GO:0051536: iron-sulfur cluster binding	6.51E-03
63	GO:0004857: enzyme inhibitor activity	6.51E-03
64	GO:0005528: FK506 binding	6.51E-03
65	GO:0047134: protein-disulfide reductase activity	9.45E-03
66	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.05E-02
67	GO:0004791: thioredoxin-disulfide reductase activity	1.11E-02
68	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.34E-02
69	GO:0051015: actin filament binding	1.34E-02
70	GO:0005524: ATP binding	1.37E-02
71	GO:0008237: metallopeptidase activity	1.46E-02
72	GO:0008168: methyltransferase activity	1.51E-02
73	GO:0016597: amino acid binding	1.52E-02
74	GO:0016168: chlorophyll binding	1.65E-02
75	GO:0102483: scopolin beta-glucosidase activity	1.78E-02
76	GO:0005525: GTP binding	2.18E-02
77	GO:0003746: translation elongation factor activity	2.26E-02
78	GO:0016787: hydrolase activity	2.28E-02
79	GO:0003723: RNA binding	2.33E-02
80	GO:0008422: beta-glucosidase activity	2.41E-02
81	GO:0050661: NADP binding	2.48E-02
82	GO:0051537: 2 iron, 2 sulfur cluster binding	2.87E-02
83	GO:0015035: protein disulfide oxidoreductase activity	4.40E-02

Rank	GO Term	Adjusted P value
1	GO:0009571: proplastid stroma	0.00E+00
2	GO:0010170: glucose-1-phosphate adenylyltransferase complex	0.00E+00
3	GO:0005835: fatty acid synthase complex	0.00E+00
4	GO:0009507: chloroplast	1.70E-48
5	GO:0009535: chloroplast thylakoid membrane	4.20E-27
6	GO:0009570: chloroplast stroma	1.76E-22
7	GO:0009534: chloroplast thylakoid	2.05E-21
8	GO:0009941: chloroplast envelope	1.79E-20
9	GO:0009579: thylakoid	9.91E-13
10	GO:0009543: chloroplast thylakoid lumen	3.44E-07
11	GO:0031977: thylakoid lumen	6.52E-07
12	GO:0005840: ribosome	1.28E-06
13	GO:0031969: chloroplast membrane	7.78E-05
14	GO:0010319: stromule	9.81E-05
15	GO:0009547: plastid ribosome	1.23E-04
16	GO:0030095: chloroplast photosystem II	3.07E-04
17	GO:0042651: thylakoid membrane	4.71E-04
18	GO:0010007: magnesium chelatase complex	4.72E-04
19	GO:0009544: chloroplast ATP synthase complex	8.97E-04
20	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	1.39E-03
21	GO:0022626: cytosolic ribosome	2.32E-03
22	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.91E-03
23	GO:0005763: mitochondrial small ribosomal subunit	2.91E-03
24	GO:0000311: plastid large ribosomal subunit	4.39E-03
25	GO:0032040: small-subunit processome	4.39E-03
26	GO:0030076: light-harvesting complex	5.63E-03
27	GO:0016020: membrane	6.79E-03
28	GO:0009654: photosystem II oxygen evolving complex	6.98E-03
29	GO:0015935: small ribosomal subunit	7.45E-03
30	GO:0015629: actin cytoskeleton	8.43E-03
31	GO:0019898: extrinsic component of membrane	1.16E-02
32	GO:0015934: large ribosomal subunit	2.12E-02
33	GO:0005856: cytoskeleton	2.95E-02
34	GO:0009706: chloroplast inner membrane	4.31E-02
35	GO:0010287: plastoglobule	4.86E-02
36	GO:0048046: apoplast	4.91E-02