gene detail

Gene description

TAIR ID: AT2G25840

Short description: Nucleotidylyl transferase superfamily protein

Pathogen responsiveness: -0.47

General responsiveness: -0.30

Orthologous

Rice:

Maize:

Wheat: No orthologous gene

GO biological process

tryptophanyl-tRNA aminoacylation, plant ovule development, tRNA aminoacylation for protein translation

GO cellular component

chloroplast, mitochondrion, cytoplasm, chloroplast stroma

GO molecular function

ATP binding, tryptophan-tRNA ligase activity, transferase activity, aminoacyl-tRNA ligase activity

Protein domain

Pfam	PF00579, tRNA synthetases class I (W and Y)

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath00970: Aminoacyl-tRNA biosynthesis

Transcriptional regulation

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

Differentially expressed condition

13 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	-1.67	5.37E-07
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-1.55	1.86E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.88	1.73E-06
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-1.54	1.53E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.18	1.73E-11
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.11	1.96E-13
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.91	1.25E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-1.72	4.17E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.80	2.57E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.18	1.17E-13
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.35	1.10E-12
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-1.65	1.79E-08
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.55	1.58E-07