gene detail

Gene description

maizeGDB: GRMZM2G177970

Short description: Nucleotidylyl transferase superfamily protein

Orthologous

Arabidopsis:

AT2G25840

Rice:

OS01G0743400

Wheat: No orthologous

GO biological process

translation, tRNA aminoacylation for protein translation, tryptophanyl-tRNA aminoacylation, chloroplast organization, embryo development ending in seed dormancy, thylakoid membrane organization, vegetative to reproductive phase transition of meristem, iron-sulfur cluster assembly, plant ovule development

GO cellular component

cytoplasm, mitochondrion, chloroplast, chloroplast stroma

GO molecular function

nucleotide binding, aminoacyl-tRNA ligase activity, tryptophan-tRNA ligase activity, ATP binding, ligase activity

Protein domain

Pfam	PF00579, tRNA synthetases class I (W and Y)

Metabolic pathway

TRNA-CHARGING-PWY: tRNA charging pathway

Coexpression network

click to view coexpression network

Differentially expressed condition

10 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE10023	Mock, 4.5 d	SG200, 4.5 d	-2.26	7.41E-13
GSE10023	Mock, 4 d	SG200, 4 d	-1.65	2.79E-09
GSE19559	Mock, 4 d	SG200, 4 d	-1.65	1.95E-04
GSE19559	Mock, 4 d	SG200_fox1, 4 d	-1.60	2.67E-04
GSE48406	Mock, 4 d	SG200D19A, 4 d	-1.62	1.07E-05
GSE48406	Mock, 4 d	SG200Dtin1, 4 d	-1.86	6.54E-07
GSE48406	Mock, 4 d	SG200Dtin3, 4 d	-1.52	5.04E-06
GSE48406	Mock, 4 d	SG200Dtin4, 4 d	-1.70	4.39E-06
GSE48406	Mock, 4 d	SG200Dtin5, 4 d	-1.56	8.74E-06
GSE48406	Mock, 4 d	SG200, 4 d	-1.65	2.28E-06