gene detail

Gene description

TAIR ID: AT2G20750

Short description: expansin B1

Pathogen responsiveness: 0.62

General responsiveness: 0.38

Orthologous

Rice:

OS02G0639500 OS04G0552000 OS07G0496250 OS10G0542400

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

cell wall organization, plant-type cell wall loosening, unidimensional cell growth, syncytium formation, plant-type cell wall organization, sexual reproduction

GO cellular component

membrane, extracellular region, cell wall, plasmodesma

GO molecular function

unkown

Protein domain

Pfam	PF01357, Pollen allergen
Pfam	PF03330, Lytic transglycolase
SMART	SM00837, DPBB_1

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G18770, AT2G43010

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

32 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.69	7.62E-06
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	-1.82	4.03E-08
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.84	2.59E-06
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.94	3.88E-13
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min	-1.95	1.81E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.96	2.00E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.96	5.05E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.05	2.12E-13
GSE6556	Col, WT, control	Col, WT, PstDC3000 AvrRpt2 48 h	-2.07	5.10E-04
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-2.11	1.98E-13

Showing 1 to 10 of 32 entries

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