co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G20750

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045014: negative regulation of transcription by glucose	0.00E+00
2	GO:0000819: sister chromatid segregation	0.00E+00
3	GO:0044774: mitotic DNA integrity checkpoint	0.00E+00
4	GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement	0.00E+00
5	GO:0006907: pinocytosis	0.00E+00
6	GO:0010583: response to cyclopentenone	2.32E-07
7	GO:0043039: tRNA aminoacylation	8.98E-06
8	GO:0010588: cotyledon vascular tissue pattern formation	1.34E-04
9	GO:0048497: maintenance of floral organ identity	1.80E-04
10	GO:0015904: tetracycline transport	4.51E-04
11	GO:0048016: inositol phosphate-mediated signaling	4.51E-04
12	GO:0006434: seryl-tRNA aminoacylation	4.51E-04
13	GO:0010726: positive regulation of hydrogen peroxide metabolic process	4.51E-04
14	GO:0006438: valyl-tRNA aminoacylation	4.51E-04
15	GO:0046520: sphingoid biosynthetic process	4.51E-04
16	GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process	4.51E-04
17	GO:0046506: sulfolipid biosynthetic process	4.51E-04
18	GO:0032958: inositol phosphate biosynthetic process	4.51E-04
19	GO:0006426: glycyl-tRNA aminoacylation	4.51E-04
20	GO:0051301: cell division	4.70E-04
21	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	6.84E-04
22	GO:0006351: transcription, DNA-templated	8.34E-04
23	GO:1901529: positive regulation of anion channel activity	9.73E-04
24	GO:0061062: regulation of nematode larval development	9.73E-04
25	GO:0009786: regulation of asymmetric cell division	9.73E-04
26	GO:0031648: protein destabilization	9.73E-04
27	GO:0006782: protoporphyrinogen IX biosynthetic process	1.10E-03
28	GO:0048829: root cap development	1.10E-03
29	GO:0000910: cytokinesis	1.23E-03
30	GO:0090506: axillary shoot meristem initiation	1.58E-03
31	GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement	1.58E-03
32	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	1.58E-03
33	GO:0010226: response to lithium ion	1.58E-03
34	GO:0031145: anaphase-promoting complex-dependent catabolic process	1.58E-03
35	GO:0001578: microtubule bundle formation	1.58E-03
36	GO:0030261: chromosome condensation	1.58E-03
37	GO:0006020: inositol metabolic process	2.29E-03
38	GO:0030071: regulation of mitotic metaphase/anaphase transition	2.29E-03
39	GO:0007276: gamete generation	2.29E-03
40	GO:0010088: phloem development	2.29E-03
41	GO:0006424: glutamyl-tRNA aminoacylation	2.29E-03
42	GO:0009558: embryo sac cellularization	2.29E-03
43	GO:0010321: regulation of vegetative phase change	2.29E-03
44	GO:0009734: auxin-activated signaling pathway	2.74E-03
45	GO:0051322: anaphase	3.08E-03
46	GO:0042991: transcription factor import into nucleus	3.08E-03
47	GO:0048629: trichome patterning	3.08E-03
48	GO:0007005: mitochondrion organization	3.44E-03
49	GO:0045892: negative regulation of transcription, DNA-templated	3.62E-03
50	GO:0007094: mitotic spindle assembly checkpoint	3.95E-03
51	GO:0032957: inositol trisphosphate metabolic process	3.95E-03
52	GO:0009247: glycolipid biosynthetic process	3.95E-03
53	GO:0042127: regulation of cell proliferation	4.08E-03
54	GO:0016042: lipid catabolic process	4.83E-03
55	GO:0016554: cytidine to uridine editing	4.89E-03
56	GO:0018258: protein O-linked glycosylation via hydroxyproline	4.89E-03
57	GO:0009913: epidermal cell differentiation	4.89E-03
58	GO:0046855: inositol phosphate dephosphorylation	4.89E-03
59	GO:1902456: regulation of stomatal opening	4.89E-03
60	GO:0010942: positive regulation of cell death	4.89E-03
61	GO:0010405: arabinogalactan protein metabolic process	4.89E-03
62	GO:0009736: cytokinin-activated signaling pathway	5.11E-03
63	GO:0009741: response to brassinosteroid	5.15E-03
64	GO:0010305: leaf vascular tissue pattern formation	5.15E-03
65	GO:0007018: microtubule-based movement	5.54E-03
66	GO:0010067: procambium histogenesis	5.90E-03
67	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	5.90E-03
68	GO:0048825: cotyledon development	5.95E-03
69	GO:0006468: protein phosphorylation	6.77E-03
70	GO:0000712: resolution of meiotic recombination intermediates	6.98E-03
71	GO:0045995: regulation of embryonic development	6.98E-03
72	GO:1900056: negative regulation of leaf senescence	6.98E-03
73	GO:0000082: G1/S transition of mitotic cell cycle	6.98E-03
74	GO:0010444: guard mother cell differentiation	6.98E-03
75	GO:0009733: response to auxin	7.81E-03
76	GO:0046620: regulation of organ growth	8.12E-03
77	GO:0009704: de-etiolation	8.12E-03
78	GO:0010492: maintenance of shoot apical meristem identity	8.12E-03
79	GO:0051726: regulation of cell cycle	8.64E-03
80	GO:0009835: fruit ripening	1.06E-02
81	GO:0010332: response to gamma radiation	1.06E-02
82	GO:0051865: protein autoubiquitination	1.06E-02
83	GO:0048589: developmental growth	1.06E-02
84	GO:0009056: catabolic process	1.06E-02
85	GO:0015995: chlorophyll biosynthetic process	1.09E-02
86	GO:0006779: porphyrin-containing compound biosynthetic process	1.19E-02
87	GO:1900865: chloroplast RNA modification	1.19E-02
88	GO:0007346: regulation of mitotic cell cycle	1.19E-02
89	GO:0048481: plant ovule development	1.21E-02
90	GO:0000160: phosphorelay signal transduction system	1.27E-02
91	GO:0010311: lateral root formation	1.27E-02
92	GO:0006949: syncytium formation	1.33E-02
93	GO:0006259: DNA metabolic process	1.33E-02
94	GO:0009641: shade avoidance	1.33E-02
95	GO:0046856: phosphatidylinositol dephosphorylation	1.47E-02
96	GO:0006865: amino acid transport	1.47E-02
97	GO:0008285: negative regulation of cell proliferation	1.47E-02
98	GO:0006265: DNA topological change	1.47E-02
99	GO:0009750: response to fructose	1.47E-02
100	GO:0048229: gametophyte development	1.47E-02
101	GO:0040008: regulation of growth	1.52E-02
102	GO:0006312: mitotic recombination	1.62E-02
103	GO:0012501: programmed cell death	1.62E-02
104	GO:0010152: pollen maturation	1.62E-02
105	GO:2000012: regulation of auxin polar transport	1.78E-02
106	GO:0010102: lateral root morphogenesis	1.78E-02
107	GO:0048364: root development	1.91E-02
108	GO:0006355: regulation of transcription, DNA-templated	1.91E-02
109	GO:0006302: double-strand break repair	1.94E-02
110	GO:0010020: chloroplast fission	1.94E-02
111	GO:0007034: vacuolar transport	1.94E-02
112	GO:0010223: secondary shoot formation	1.94E-02
113	GO:0009887: animal organ morphogenesis	1.94E-02
114	GO:0009744: response to sucrose	1.99E-02
115	GO:0009640: photomorphogenesis	1.99E-02
116	GO:0090351: seedling development	2.10E-02
117	GO:0006833: water transport	2.27E-02
118	GO:0006636: unsaturated fatty acid biosynthetic process	2.27E-02
119	GO:0006863: purine nucleobase transport	2.27E-02
120	GO:0080147: root hair cell development	2.44E-02
121	GO:0009664: plant-type cell wall organization	2.50E-02
122	GO:0019953: sexual reproduction	2.62E-02
123	GO:0006418: tRNA aminoacylation for protein translation	2.62E-02
124	GO:0007017: microtubule-based process	2.62E-02
125	GO:0016567: protein ubiquitination	2.77E-02
126	GO:0048278: vesicle docking	2.81E-02
127	GO:0051321: meiotic cell cycle	2.81E-02
128	GO:0003333: amino acid transmembrane transport	2.81E-02
129	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.99E-02
130	GO:0009693: ethylene biosynthetic process	3.18E-02
131	GO:0009686: gibberellin biosynthetic process	3.18E-02
132	GO:0010082: regulation of root meristem growth	3.18E-02
133	GO:0001944: vasculature development	3.18E-02
134	GO:0007049: cell cycle	3.21E-02
135	GO:0048367: shoot system development	3.27E-02
136	GO:0048443: stamen development	3.38E-02
137	GO:0010091: trichome branching	3.38E-02
138	GO:0009793: embryo development ending in seed dormancy	3.53E-02
139	GO:0009740: gibberellic acid mediated signaling pathway	3.59E-02
140	GO:0009735: response to cytokinin	3.66E-02
141	GO:0010118: stomatal movement	3.78E-02
142	GO:0000226: microtubule cytoskeleton organization	3.78E-02
143	GO:0080022: primary root development	3.78E-02
144	GO:0034220: ion transmembrane transport	3.78E-02
145	GO:0010051: xylem and phloem pattern formation	3.78E-02
146	GO:0010087: phloem or xylem histogenesis	3.78E-02
147	GO:0009624: response to nematode	3.81E-02
148	GO:0009958: positive gravitropism	3.99E-02
149	GO:0009742: brassinosteroid mediated signaling pathway	4.04E-02
150	GO:0009416: response to light stimulus	4.16E-02
151	GO:0007059: chromosome segregation	4.20E-02
152	GO:0061025: membrane fusion	4.20E-02
153	GO:0009749: response to glucose	4.41E-02
154	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	4.63E-02
155	GO:0071554: cell wall organization or biogenesis	4.63E-02
156	GO:0002229: defense response to oomycetes	4.63E-02
157	GO:0032502: developmental process	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0071633: dihydroceramidase activity	0.00E+00
2	GO:0046510: UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity	0.00E+00
3	GO:0047661: amino-acid racemase activity	0.00E+00
4	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
5	GO:0009899: ent-kaurene synthase activity	0.00E+00
6	GO:0000170: sphingosine hydroxylase activity	4.51E-04
7	GO:0000829: inositol heptakisphosphate kinase activity	4.51E-04
8	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	4.51E-04
9	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	4.51E-04
10	GO:0004828: serine-tRNA ligase activity	4.51E-04
11	GO:0046030: inositol trisphosphate phosphatase activity	4.51E-04
12	GO:0000828: inositol hexakisphosphate kinase activity	4.51E-04
13	GO:0004818: glutamate-tRNA ligase activity	4.51E-04
14	GO:0009374: biotin binding	4.51E-04
15	GO:0004832: valine-tRNA ligase activity	4.51E-04
16	GO:0004820: glycine-tRNA ligase activity	4.51E-04
17	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	4.51E-04
18	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	6.40E-04
19	GO:0052689: carboxylic ester hydrolase activity	7.82E-04
20	GO:0010296: prenylcysteine methylesterase activity	9.73E-04
21	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	9.73E-04
22	GO:0004109: coproporphyrinogen oxidase activity	9.73E-04
23	GO:0042284: sphingolipid delta-4 desaturase activity	9.73E-04
24	GO:0008493: tetracycline transporter activity	9.73E-04
25	GO:0005515: protein binding	9.85E-04
26	GO:0004674: protein serine/threonine kinase activity	1.58E-03
27	GO:0001872: (1->3)-beta-D-glucan binding	2.29E-03
28	GO:0003916: DNA topoisomerase activity	2.29E-03
29	GO:0010011: auxin binding	3.08E-03
30	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	3.08E-03
31	GO:0019199: transmembrane receptor protein kinase activity	3.08E-03
32	GO:0008408: 3'-5' exonuclease activity	3.14E-03
33	GO:0004176: ATP-dependent peptidase activity	3.14E-03
34	GO:0042803: protein homodimerization activity	3.82E-03
35	GO:0043621: protein self-association	3.86E-03
36	GO:0003989: acetyl-CoA carboxylase activity	3.95E-03
37	GO:0004722: protein serine/threonine phosphatase activity	4.14E-03
38	GO:0005524: ATP binding	4.16E-03
39	GO:1990714: hydroxyproline O-galactosyltransferase activity	4.89E-03
40	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	4.89E-03
41	GO:0004527: exonuclease activity	5.15E-03
42	GO:0016853: isomerase activity	5.54E-03
43	GO:0009055: electron carrier activity	5.75E-03
44	GO:0003777: microtubule motor activity	5.82E-03
45	GO:0016832: aldehyde-lyase activity	5.90E-03
46	GO:0003700: transcription factor activity, sequence-specific DNA binding	6.91E-03
47	GO:0000156: phosphorelay response regulator activity	7.26E-03
48	GO:0016788: hydrolase activity, acting on ester bonds	7.38E-03
49	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	8.12E-03
50	GO:0008237: metallopeptidase activity	8.22E-03
51	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	9.33E-03
52	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	9.33E-03
53	GO:0004672: protein kinase activity	1.38E-02
54	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.47E-02
55	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	1.62E-02
56	GO:0000049: tRNA binding	1.62E-02
57	GO:0008017: microtubule binding	1.71E-02
58	GO:0003725: double-stranded RNA binding	1.78E-02
59	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.94E-02
60	GO:0043565: sequence-specific DNA binding	2.00E-02
61	GO:0004519: endonuclease activity	2.03E-02
62	GO:0003712: transcription cofactor activity	2.10E-02
63	GO:0004190: aspartic-type endopeptidase activity	2.10E-02
64	GO:0003677: DNA binding	2.29E-02
65	GO:0005345: purine nucleobase transmembrane transporter activity	2.62E-02
66	GO:0016298: lipase activity	2.77E-02
67	GO:0004707: MAP kinase activity	2.81E-02
68	GO:0008094: DNA-dependent ATPase activity	2.81E-02
69	GO:0033612: receptor serine/threonine kinase binding	2.81E-02
70	GO:0008289: lipid binding	2.92E-02
71	GO:0046983: protein dimerization activity	2.94E-02
72	GO:0015171: amino acid transmembrane transporter activity	2.97E-02
73	GO:0030570: pectate lyase activity	3.18E-02
74	GO:0004650: polygalacturonase activity	3.48E-02
75	GO:0004812: aminoacyl-tRNA ligase activity	3.58E-02
76	GO:0003779: actin binding	3.70E-02
77	GO:0015035: protein disulfide oxidoreductase activity	3.92E-02
78	GO:0001085: RNA polymerase II transcription factor binding	3.99E-02
79	GO:0004871: signal transducer activity	4.82E-02
80	GO:0004518: nuclease activity	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0005828: kinetochore microtubule	1.17E-04
3	GO:0000791: euchromatin	4.51E-04
4	GO:0000796: condensin complex	4.51E-04
5	GO:0030870: Mre11 complex	9.73E-04
6	GO:0030139: endocytic vesicle	1.58E-03
7	GO:0009317: acetyl-CoA carboxylase complex	1.58E-03
8	GO:0009531: secondary cell wall	2.29E-03
9	GO:0032585: multivesicular body membrane	2.29E-03
10	GO:0030286: dynein complex	3.08E-03
11	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	3.08E-03
12	GO:0005886: plasma membrane	3.75E-03
13	GO:0000795: synaptonemal complex	3.95E-03
14	GO:0000776: kinetochore	3.95E-03
15	GO:0005871: kinesin complex	4.42E-03
16	GO:0000793: condensed chromosome	4.89E-03
17	GO:0046658: anchored component of plasma membrane	5.65E-03
18	GO:0010369: chromocenter	5.90E-03
19	GO:0000777: condensed chromosome kinetochore	5.90E-03
20	GO:0000815: ESCRT III complex	5.90E-03
21	GO:0009986: cell surface	6.98E-03
22	GO:0000794: condensed nuclear chromosome	6.98E-03
23	GO:0005874: microtubule	9.44E-03
24	GO:0000922: spindle pole	1.06E-02
25	GO:0009524: phragmoplast	1.14E-02
26	GO:0005876: spindle microtubule	1.19E-02
27	GO:0005884: actin filament	1.47E-02
28	GO:0090404: pollen tube tip	1.47E-02
29	GO:0009574: preprophase band	1.78E-02
30	GO:0005875: microtubule associated complex	2.27E-02
31	GO:0031225: anchored component of membrane	2.94E-02
32	GO:0015629: actin cytoskeleton	3.18E-02
33	GO:0009504: cell plate	4.41E-02
34	GO:0000785: chromatin	4.85E-02