gene detail

Gene description

TAIR ID: AT2G20570

Short description: GBF's pro-rich region-interacting factor 1

Pathogen responsiveness: -0.99

General responsiveness: 1.98

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G087804

Wheat:

TAAFFX.39476.1.S1_AT

GO biological process

negative regulation of leaf senescence, positive regulation of transcription, DNA-templated, regulation of chlorophyll biosynthetic process, regulation of transcription, transcription, chloroplast organization, signal transduction, negative regulation of flower development

GO cellular component

nucleus

GO molecular function

DNA binding, protein binding, transcription factor activity, sequence-specific DNA binding

Protein domain

Pfam	PF00249, Myb-like DNA-binding domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT3G14230, AT1G24260, AT5G61850, AT1G19350, AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 12 (Top20%)

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE13739	Col, WT, control 0 h	Col, WT, G.orontii 6 h	-1.59	1.30E-09
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.79	1.07E-04
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.06	9.46E-07
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.77	1.80E-03
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	-2.07	4.92E-05
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	-2.12	4.76E-05