gene detail

Gene description

TAIR ID: AT2G02950

Short description: phytochrome kinase substrate 1

Pathogen responsiveness: 0.42

General responsiveness: 0.82

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

red, far-red light phototransduction, red or far-red light signaling pathway, positive gravitropism, phototropism, response to red light, response to far red light

GO cellular component

plasma membrane, cytoplasm

GO molecular function

protein binding

Protein domain

No domain annotation

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 9 (Top20%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

28 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE13739	Col, eds, control 0 h	Col, eds, G.orontii 6 h	1.90	2.98E-05
GSE13739	Col, WT, control 0 h	Col, WT, G.orontii 6 h	1.86	3.82E-05
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 HrpA- 12 h	-1.52	2.66E-03
GSE56094	Col, WT, control 8 h	Col, WT, hrpA- 8 h	-1.53	3.52E-08
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-1.58	1.13E-09
GSE56094	Col, WT, control 11 h	Col, WT, hrpA- 11 h	-1.58	9.40E-09
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.64	7.31E-03
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.68	2.11E-12
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.68	2.33E-10
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	-1.75	6.17E-11

Showing 1 to 10 of 28 entries

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