Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G02950

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006792: regulation of sulfur utilization0.00E+00
2GO:1901485: positive regulation of transcription factor catabolic process0.00E+00
3GO:0010200: response to chitin1.01E-06
4GO:0009751: response to salicylic acid3.64E-05
5GO:0045489: pectin biosynthetic process7.02E-05
6GO:0080167: response to karrikin1.31E-04
7GO:0050691: regulation of defense response to virus by host1.48E-04
8GO:0033481: galacturonate biosynthetic process1.48E-04
9GO:0048438: floral whorl development1.48E-04
10GO:0009962: regulation of flavonoid biosynthetic process1.48E-04
11GO:2000029: regulation of proanthocyanidin biosynthetic process1.48E-04
12GO:0071555: cell wall organization1.52E-04
13GO:0009813: flavonoid biosynthetic process2.56E-04
14GO:0031542: positive regulation of anthocyanin biosynthetic process3.38E-04
15GO:0071497: cellular response to freezing3.38E-04
16GO:0010220: positive regulation of vernalization response3.38E-04
17GO:0042546: cell wall biogenesis4.82E-04
18GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway5.54E-04
19GO:0031347: regulation of defense response5.83E-04
20GO:2000022: regulation of jasmonic acid mediated signaling pathway7.15E-04
21GO:1902358: sulfate transmembrane transport7.93E-04
22GO:0000271: polysaccharide biosynthetic process9.81E-04
23GO:0009741: response to brassinosteroid1.05E-03
24GO:0046345: abscisic acid catabolic process1.05E-03
25GO:0006749: glutathione metabolic process1.05E-03
26GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.29E-03
27GO:2000762: regulation of phenylpropanoid metabolic process1.33E-03
28GO:0010438: cellular response to sulfur starvation1.33E-03
29GO:1900425: negative regulation of defense response to bacterium1.63E-03
30GO:0000060: protein import into nucleus, translocation1.63E-03
31GO:0009753: response to jasmonic acid1.69E-03
32GO:0010076: maintenance of floral meristem identity1.96E-03
33GO:0009554: megasporogenesis1.96E-03
34GO:0010555: response to mannitol1.96E-03
35GO:0010077: maintenance of inflorescence meristem identity1.96E-03
36GO:2000067: regulation of root morphogenesis1.96E-03
37GO:0010411: xyloglucan metabolic process2.17E-03
38GO:0051510: regulation of unidimensional cell growth2.30E-03
39GO:0050829: defense response to Gram-negative bacterium2.30E-03
40GO:0006357: regulation of transcription from RNA polymerase II promoter2.32E-03
41GO:0009739: response to gibberellin2.36E-03
42GO:0010439: regulation of glucosinolate biosynthetic process2.66E-03
43GO:0030162: regulation of proteolysis2.66E-03
44GO:0016051: carbohydrate biosynthetic process3.03E-03
45GO:2000031: regulation of salicylic acid mediated signaling pathway3.04E-03
46GO:0007186: G-protein coupled receptor signaling pathway3.04E-03
47GO:0030154: cell differentiation3.19E-03
48GO:0009733: response to auxin3.36E-03
49GO:0051865: protein autoubiquitination3.44E-03
50GO:0009723: response to ethylene4.28E-03
51GO:0043069: negative regulation of programmed cell death4.29E-03
52GO:1903507: negative regulation of nucleic acid-templated transcription4.73E-03
53GO:0009750: response to fructose4.73E-03
54GO:0000038: very long-chain fatty acid metabolic process4.73E-03
55GO:0016925: protein sumoylation5.20E-03
56GO:0016024: CDP-diacylglycerol biosynthetic process5.20E-03
57GO:0010582: floral meristem determinacy5.20E-03
58GO:0018107: peptidyl-threonine phosphorylation5.68E-03
59GO:0034605: cellular response to heat6.17E-03
60GO:0010143: cutin biosynthetic process6.17E-03
61GO:0002237: response to molecule of bacterial origin6.17E-03
62GO:0009225: nucleotide-sugar metabolic process6.67E-03
63GO:0010026: trichome differentiation8.29E-03
64GO:0009411: response to UV1.00E-02
65GO:0040007: growth1.00E-02
66GO:0010214: seed coat development1.06E-02
67GO:0019722: calcium-mediated signaling1.06E-02
68GO:0010087: phloem or xylem histogenesis1.19E-02
69GO:0048653: anther development1.19E-02
70GO:0010268: brassinosteroid homeostasis1.25E-02
71GO:0009749: response to glucose1.39E-02
72GO:0009791: post-embryonic development1.39E-02
73GO:0006468: protein phosphorylation1.44E-02
74GO:0016132: brassinosteroid biosynthetic process1.45E-02
75GO:0071554: cell wall organization or biogenesis1.45E-02
76GO:0002229: defense response to oomycetes1.45E-02
77GO:0010583: response to cyclopentenone1.52E-02
78GO:0009639: response to red or far red light1.67E-02
79GO:0009828: plant-type cell wall loosening1.67E-02
80GO:0016125: sterol metabolic process1.67E-02
81GO:0019760: glucosinolate metabolic process1.67E-02
82GO:0007267: cell-cell signaling1.74E-02
83GO:0001666: response to hypoxia1.89E-02
84GO:0016126: sterol biosynthetic process1.89E-02
85GO:0009826: unidimensional cell growth1.93E-02
86GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.97E-02
87GO:0016311: dephosphorylation2.20E-02
88GO:0009407: toxin catabolic process2.45E-02
89GO:0048527: lateral root development2.53E-02
90GO:0007568: aging2.53E-02
91GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.58E-02
92GO:0009867: jasmonic acid mediated signaling pathway2.70E-02
93GO:0045454: cell redox homeostasis2.98E-02
94GO:0042542: response to hydrogen peroxide3.14E-02
95GO:0006355: regulation of transcription, DNA-templated3.17E-02
96GO:0009744: response to sucrose3.23E-02
97GO:0008643: carbohydrate transport3.42E-02
98GO:0009636: response to toxic substance3.51E-02
99GO:0000165: MAPK cascade3.71E-02
100GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process3.71E-02
101GO:0009809: lignin biosynthetic process4.00E-02
102GO:0051603: proteolysis involved in cellular protein catabolic process4.10E-02
103GO:0010224: response to UV-B4.10E-02
104GO:0048316: seed development4.61E-02
RankGO TermAdjusted P value
1GO:0045430: chalcone isomerase activity1.75E-05
2GO:0003838: sterol 24-C-methyltransferase activity1.48E-04
3GO:0080132: fatty acid alpha-hydroxylase activity1.48E-04
4GO:0044212: transcription regulatory region DNA binding1.52E-04
5GO:0048531: beta-1,3-galactosyltransferase activity3.38E-04
6GO:0010295: (+)-abscisic acid 8'-hydroxylase activity5.54E-04
7GO:0001664: G-protein coupled receptor binding5.54E-04
8GO:0031683: G-protein beta/gamma-subunit complex binding5.54E-04
9GO:0043565: sequence-specific DNA binding6.76E-04
10GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity7.15E-04
11GO:0050378: UDP-glucuronate 4-epimerase activity1.05E-03
12GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting1.11E-03
13GO:0016762: xyloglucan:xyloglucosyl transferase activity1.29E-03
14GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding1.30E-03
15GO:0031386: protein tag1.33E-03
16GO:0016759: cellulose synthase activity1.56E-03
17GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity1.63E-03
18GO:0004366: glycerol-3-phosphate O-acyltransferase activity1.63E-03
19GO:0016798: hydrolase activity, acting on glycosyl bonds2.17E-03
20GO:0016621: cinnamoyl-CoA reductase activity2.30E-03
21GO:0016757: transferase activity, transferring glycosyl groups2.46E-03
22GO:0008271: secondary active sulfate transmembrane transporter activity3.04E-03
23GO:0000976: transcription regulatory region sequence-specific DNA binding5.20E-03
24GO:0015116: sulfate transmembrane transporter activity5.20E-03
25GO:0003712: transcription cofactor activity6.67E-03
26GO:0008134: transcription factor binding7.74E-03
27GO:0003714: transcription corepressor activity7.74E-03
28GO:0016758: transferase activity, transferring hexosyl groups9.10E-03
29GO:0004402: histone acetyltransferase activity1.19E-02
30GO:0004674: protein serine/threonine kinase activity1.57E-02
31GO:0003700: transcription factor activity, sequence-specific DNA binding1.63E-02
32GO:0016791: phosphatase activity1.67E-02
33GO:0016722: oxidoreductase activity, oxidizing metal ions1.74E-02
34GO:0016413: O-acetyltransferase activity1.81E-02
35GO:0046982: protein heterodimerization activity1.97E-02
36GO:0042803: protein homodimerization activity3.12E-02
37GO:0004871: signal transducer activity3.12E-02
38GO:0004364: glutathione transferase activity3.14E-02
39GO:0004185: serine-type carboxypeptidase activity3.23E-02
40GO:0015293: symporter activity3.51E-02
41GO:0009055: electron carrier activity3.93E-02
42GO:0016298: lipase activity4.10E-02
43GO:0031625: ubiquitin protein ligase binding4.30E-02
RankGO TermAdjusted P value
1GO:0090568: nuclear transcriptional repressor complex0.00E+00
2GO:0031225: anchored component of membrane1.01E-05
3GO:0005794: Golgi apparatus4.78E-05
4GO:0009505: plant-type cell wall5.08E-05
5GO:0042406: extrinsic component of endoplasmic reticulum membrane5.54E-04
6GO:0005615: extracellular space2.36E-03
7GO:0046658: anchored component of plasma membrane2.92E-03
8GO:0000139: Golgi membrane4.67E-03
9GO:0009506: plasmodesma7.69E-03
10GO:0048046: apoplast8.74E-03
11GO:0032580: Golgi cisterna membrane1.67E-02
12GO:0005576: extracellular region1.87E-02
13GO:0016021: integral component of membrane2.11E-02
14GO:0019005: SCF ubiquitin ligase complex2.28E-02
15GO:0005886: plasma membrane2.39E-02
16GO:0000786: nucleosome2.61E-02
17GO:0005618: cell wall2.96E-02
18GO:0005834: heterotrimeric G-protein complex4.71E-02
Gene type



Gene DE type