Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G02950

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process0.00E+00
2GO:0070979: protein K11-linked ubiquitination0.00E+00
3GO:0090706: specification of plant organ position0.00E+00
4GO:0046838: phosphorylated carbohydrate dephosphorylation0.00E+00
5GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
6GO:0017038: protein import0.00E+00
7GO:0010450: inflorescence meristem growth5.03E-05
8GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process5.03E-05
9GO:0051382: kinetochore assembly5.03E-05
10GO:1900033: negative regulation of trichome patterning1.23E-04
11GO:0031297: replication fork processing1.23E-04
12GO:0031145: anaphase-promoting complex-dependent catabolic process2.11E-04
13GO:0045165: cell fate commitment2.11E-04
14GO:0046739: transport of virus in multicellular host3.09E-04
15GO:0030071: regulation of mitotic metaphase/anaphase transition3.09E-04
16GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity3.09E-04
17GO:0010306: rhamnogalacturonan II biosynthetic process3.09E-04
18GO:0048629: trichome patterning4.15E-04
19GO:0010109: regulation of photosynthesis4.15E-04
20GO:0031122: cytoplasmic microtubule organization4.15E-04
21GO:1902183: regulation of shoot apical meristem development5.26E-04
22GO:0010158: abaxial cell fate specification5.26E-04
23GO:0032876: negative regulation of DNA endoreduplication5.26E-04
24GO:0000304: response to singlet oxygen5.26E-04
25GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway6.44E-04
26GO:0016554: cytidine to uridine editing6.44E-04
27GO:0030488: tRNA methylation7.68E-04
28GO:0000712: resolution of meiotic recombination intermediates8.97E-04
29GO:0006605: protein targeting1.03E-03
30GO:0032875: regulation of DNA endoreduplication1.03E-03
31GO:0010093: specification of floral organ identity1.17E-03
32GO:0007129: synapsis1.17E-03
33GO:0071482: cellular response to light stimulus1.17E-03
34GO:0010497: plasmodesmata-mediated intercellular transport1.17E-03
35GO:2000024: regulation of leaf development1.32E-03
36GO:1900865: chloroplast RNA modification1.47E-03
37GO:0009641: shade avoidance1.63E-03
38GO:0019538: protein metabolic process1.63E-03
39GO:0005983: starch catabolic process1.96E-03
40GO:0009933: meristem structural organization2.32E-03
41GO:0010207: photosystem II assembly2.32E-03
42GO:0009944: polarity specification of adaxial/abaxial axis2.88E-03
43GO:0080147: root hair cell development2.88E-03
44GO:0040008: regulation of growth2.93E-03
45GO:0008299: isoprenoid biosynthetic process3.08E-03
46GO:0048511: rhythmic process3.29E-03
47GO:0010431: seed maturation3.29E-03
48GO:0031408: oxylipin biosynthetic process3.29E-03
49GO:0010087: phloem or xylem histogenesis4.37E-03
50GO:0048868: pollen tube development4.60E-03
51GO:0010154: fruit development4.60E-03
52GO:0048544: recognition of pollen4.83E-03
53GO:0042752: regulation of circadian rhythm4.83E-03
54GO:0009646: response to absence of light4.83E-03
55GO:0000302: response to reactive oxygen species5.32E-03
56GO:0032502: developmental process5.56E-03
57GO:0010583: response to cyclopentenone5.56E-03
58GO:0010090: trichome morphogenesis5.81E-03
59GO:0010027: thylakoid membrane organization6.85E-03
60GO:0009733: response to auxin7.16E-03
61GO:0015995: chlorophyll biosynthetic process7.68E-03
62GO:0034599: cellular response to oxidative stress1.00E-02
63GO:0008283: cell proliferation1.16E-02
64GO:0009734: auxin-activated signaling pathway1.22E-02
65GO:0009909: regulation of flower development1.54E-02
66GO:0009742: brassinosteroid mediated signaling pathway1.92E-02
67GO:0009845: seed germination2.29E-02
68GO:0042744: hydrogen peroxide catabolic process2.37E-02
69GO:0007623: circadian rhythm2.72E-02
70GO:0009451: RNA modification2.76E-02
71GO:0006470: protein dephosphorylation2.99E-02
72GO:0009658: chloroplast organization3.71E-02
73GO:0009860: pollen tube growth3.91E-02
74GO:0080167: response to karrikin4.32E-02
75GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.43E-02
76GO:0015979: photosynthesis4.75E-02
RankGO TermAdjusted P value
1GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity0.00E+00
2GO:0019203: carbohydrate phosphatase activity5.03E-05
3GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity5.03E-05
4GO:0050308: sugar-phosphatase activity5.03E-05
5GO:0008568: microtubule-severing ATPase activity5.03E-05
6GO:0005528: FK506 binding1.25E-04
7GO:0070402: NADPH binding2.11E-04
8GO:0015462: ATPase-coupled protein transmembrane transporter activity2.11E-04
9GO:0004462: lactoylglutathione lyase activity6.44E-04
10GO:0016688: L-ascorbate peroxidase activity6.44E-04
11GO:2001070: starch binding6.44E-04
12GO:0004130: cytochrome-c peroxidase activity6.44E-04
13GO:0035091: phosphatidylinositol binding1.04E-03
14GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.11E-03
15GO:0003690: double-stranded DNA binding1.32E-03
16GO:0008138: protein tyrosine/serine/threonine phosphatase activity1.32E-03
17GO:0051536: iron-sulfur cluster binding2.88E-03
18GO:0016853: isomerase activity4.83E-03
19GO:0016759: cellulose synthase activity6.07E-03
20GO:0004721: phosphoprotein phosphatase activity7.68E-03
21GO:0030145: manganese ion binding9.12E-03
22GO:0004519: endonuclease activity9.39E-03
23GO:0016829: lyase activity2.29E-02
24GO:0044212: transcription regulatory region DNA binding3.12E-02
25GO:0004601: peroxidase activity3.71E-02
26GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting4.91E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast1.83E-05
2GO:0043240: Fanconi anaemia nuclear complex5.03E-05
3GO:0071821: FANCM-MHF complex5.03E-05
4GO:0009543: chloroplast thylakoid lumen2.18E-04
5GO:0031977: thylakoid lumen8.91E-04
6GO:0005680: anaphase-promoting complex1.32E-03
7GO:0016604: nuclear body1.47E-03
8GO:0009570: chloroplast stroma1.54E-03
9GO:0043234: protein complex2.69E-03
10GO:0009654: photosystem II oxygen evolving complex3.08E-03
11GO:0009535: chloroplast thylakoid membrane3.94E-03
12GO:0019898: extrinsic component of membrane5.07E-03
13GO:0009579: thylakoid1.84E-02
14GO:0009534: chloroplast thylakoid1.86E-02
15GO:0031225: anchored component of membrane2.40E-02
16GO:0031969: chloroplast membrane4.32E-02
17GO:0009941: chloroplast envelope4.33E-02
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Gene type



Gene DE type