Gene: AT1G76110
     

Gene description


TAIR ID: AT1G76110

Short description: HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain

Pathogen responsiveness: 0.87

General responsiveness: 2.00

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, polar nucleus fusion, transcription, karyogamy


GO cellular component


nucleus


GO molecular function


DNA binding, protein binding, transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF00505, HMG (high mobility group) box
PfamPF01388, ARID/BRIGHT DNA binding domain
SMARTSM00398, HMG
SMARTSM01014, ARID
SMARTSM00501, BRIGHT

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G14230, AT4G18770

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


35 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, mpk6 ko, water 4 hCol, mpk6 ko, Flg22 4 h-1.512.11E-02
GSE12856Col, WT, controlCol, WT, Bg h-1.993.52E-08
GSE12856Col, ataf1, controlCol, ataf1, Bg h-1.671.10E-07
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h-2.823.16E-03
GSE17464Laer, controlLaer, Flg22 2 h-2.662.19E-03
GSE17464Penta, controlPenta, Flg22 2 h-2.151.54E-02
GSE17464Penta, controlPenta, Flg22 2 h-3.489.12E-05
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.642.32E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.758.33E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.721.38E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-3.653.83E-10
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h-1.583.67E-08
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-1.871.67E-09
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-1.631.12E-08
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-4.058.61E-15
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.772.77E-09
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-3.674.50E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-3.971.12E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-3.006.30E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-3.999.04E-15
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-2.721.06E-14
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.693.07E-14
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-3.731.91E-16
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h-2.446.02E-14
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h-1.911.69E-02
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h-1.614.71E-02
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.081.67E-04
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-1.681.68E-13
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.802.67E-14
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-1.586.02E-11
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.902.11E-15
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.104.76E-18
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h-1.654.50E-07
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-3.228.55E-04
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-1.774.59E-02






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