co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G76110

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071000: response to magnetism	0.00E+00
2	GO:0018316: peptide cross-linking via L-cystine	0.00E+00
3	GO:0042493: response to drug	0.00E+00
4	GO:1904281: positive regulation of transcription from RNA polymerase V promoter	0.00E+00
5	GO:1990280: RNA localization to chromatin	0.00E+00
6	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
7	GO:0009583: detection of light stimulus	0.00E+00
8	GO:0090470: shoot organ boundary specification	0.00E+00
9	GO:0009638: phototropism	7.78E-06
10	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.57E-05
11	GO:0016123: xanthophyll biosynthetic process	4.65E-05
12	GO:0007017: microtubule-based process	5.18E-05
13	GO:0031426: polycistronic mRNA processing	1.98E-04
14	GO:0072387: flavin adenine dinucleotide metabolic process	1.98E-04
15	GO:0042371: vitamin K biosynthetic process	1.98E-04
16	GO:0071454: cellular response to anoxia	1.98E-04
17	GO:1902466: positive regulation of histone H3-K27 trimethylation	1.98E-04
18	GO:0010362: negative regulation of anion channel activity by blue light	1.98E-04
19	GO:1903705: positive regulation of production of siRNA involved in RNA interference	1.98E-04
20	GO:0080005: photosystem stoichiometry adjustment	4.43E-04
21	GO:0010617: circadian regulation of calcium ion oscillation	4.43E-04
22	GO:0000256: allantoin catabolic process	4.43E-04
23	GO:0099402: plant organ development	4.43E-04
24	GO:0080153: negative regulation of reductive pentose-phosphate cycle	4.43E-04
25	GO:0010343: singlet oxygen-mediated programmed cell death	4.43E-04
26	GO:1901529: positive regulation of anion channel activity	4.43E-04
27	GO:0006811: ion transport	4.64E-04
28	GO:0009767: photosynthetic electron transport chain	5.18E-04
29	GO:0010136: ureide catabolic process	7.22E-04
30	GO:0006760: folic acid-containing compound metabolic process	7.22E-04
31	GO:1902448: positive regulation of shade avoidance	7.22E-04
32	GO:1901672: positive regulation of systemic acquired resistance	7.22E-04
33	GO:0055114: oxidation-reduction process	1.02E-03
34	GO:0009650: UV protection	1.03E-03
35	GO:1901332: negative regulation of lateral root development	1.03E-03
36	GO:0010371: regulation of gibberellin biosynthetic process	1.03E-03
37	GO:0010239: chloroplast mRNA processing	1.03E-03
38	GO:0090307: mitotic spindle assembly	1.03E-03
39	GO:0006145: purine nucleobase catabolic process	1.03E-03
40	GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center	1.03E-03
41	GO:0031122: cytoplasmic microtubule organization	1.37E-03
42	GO:0046656: folic acid biosynthetic process	1.37E-03
43	GO:1902347: response to strigolactone	1.37E-03
44	GO:0009902: chloroplast relocation	1.37E-03
45	GO:0006346: methylation-dependent chromatin silencing	1.37E-03
46	GO:0031935: regulation of chromatin silencing	1.37E-03
47	GO:0009765: photosynthesis, light harvesting	1.37E-03
48	GO:0010118: stomatal movement	1.45E-03
49	GO:0046777: protein autophosphorylation	1.73E-03
50	GO:0010117: photoprotection	1.74E-03
51	GO:0046283: anthocyanin-containing compound metabolic process	1.74E-03
52	GO:0010158: abaxial cell fate specification	1.74E-03
53	GO:0009616: virus induced gene silencing	1.74E-03
54	GO:0016120: carotene biosynthetic process	1.74E-03
55	GO:0060918: auxin transport	2.14E-03
56	GO:0035194: posttranscriptional gene silencing by RNA	2.14E-03
57	GO:1901371: regulation of leaf morphogenesis	2.14E-03
58	GO:0071805: potassium ion transmembrane transport	2.46E-03
59	GO:0046654: tetrahydrofolate biosynthetic process	2.57E-03
60	GO:0010189: vitamin E biosynthetic process	2.57E-03
61	GO:0010019: chloroplast-nucleus signaling pathway	2.57E-03
62	GO:0010310: regulation of hydrogen peroxide metabolic process	2.57E-03
63	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.57E-03
64	GO:0051510: regulation of unidimensional cell growth	3.03E-03
65	GO:1900056: negative regulation of leaf senescence	3.03E-03
66	GO:0080111: DNA demethylation	3.03E-03
67	GO:0015995: chlorophyll biosynthetic process	3.24E-03
68	GO:0048564: photosystem I assembly	3.51E-03
69	GO:0018298: protein-chromophore linkage	3.59E-03
70	GO:0044030: regulation of DNA methylation	4.02E-03
71	GO:0009657: plastid organization	4.02E-03
72	GO:0010112: regulation of systemic acquired resistance	4.54E-03
73	GO:0009637: response to blue light	4.54E-03
74	GO:0009051: pentose-phosphate shunt, oxidative branch	4.54E-03
75	GO:0006098: pentose-phosphate shunt	4.54E-03
76	GO:0048507: meristem development	4.54E-03
77	GO:0008356: asymmetric cell division	5.10E-03
78	GO:1900426: positive regulation of defense response to bacterium	5.10E-03
79	GO:0010380: regulation of chlorophyll biosynthetic process	5.10E-03
80	GO:0009870: defense response signaling pathway, resistance gene-dependent	5.67E-03
81	GO:0010114: response to red light	5.85E-03
82	GO:0009744: response to sucrose	5.85E-03
83	GO:0009640: photomorphogenesis	5.85E-03
84	GO:0009658: chloroplast organization	5.98E-03
85	GO:0043085: positive regulation of catalytic activity	6.27E-03
86	GO:0008285: negative regulation of cell proliferation	6.27E-03
87	GO:0009416: response to light stimulus	6.75E-03
88	GO:0006006: glucose metabolic process	7.52E-03
89	GO:0010075: regulation of meristem growth	7.52E-03
90	GO:0009725: response to hormone	7.52E-03
91	GO:0006094: gluconeogenesis	7.52E-03
92	GO:0009785: blue light signaling pathway	7.52E-03
93	GO:0006813: potassium ion transport	7.88E-03
94	GO:0034605: cellular response to heat	8.19E-03
95	GO:0019253: reductive pentose-phosphate cycle	8.19E-03
96	GO:0080188: RNA-directed DNA methylation	8.87E-03
97	GO:0080147: root hair cell development	1.03E-02
98	GO:0006289: nucleotide-excision repair	1.03E-02
99	GO:2000377: regulation of reactive oxygen species metabolic process	1.03E-02
100	GO:0010073: meristem maintenance	1.10E-02
101	GO:0016226: iron-sulfur cluster assembly	1.26E-02
102	GO:0080092: regulation of pollen tube growth	1.26E-02
103	GO:0009411: response to UV	1.34E-02
104	GO:0010227: floral organ abscission	1.34E-02
105	GO:0010214: seed coat development	1.42E-02
106	GO:0070417: cellular response to cold	1.50E-02
107	GO:0016117: carotenoid biosynthetic process	1.50E-02
108	GO:0042752: regulation of circadian rhythm	1.76E-02
109	GO:0009646: response to absence of light	1.76E-02
110	GO:0008654: phospholipid biosynthetic process	1.85E-02
111	GO:0009791: post-embryonic development	1.85E-02
112	GO:0010193: response to ozone	1.94E-02
113	GO:0007623: circadian rhythm	1.95E-02
114	GO:0009451: RNA modification	1.99E-02
115	GO:0009733: response to auxin	2.32E-02
116	GO:0010468: regulation of gene expression	2.33E-02
117	GO:0001666: response to hypoxia	2.53E-02
118	GO:0010411: xyloglucan metabolic process	2.84E-02
119	GO:0000160: phosphorelay signal transduction system	3.16E-02
120	GO:0010218: response to far red light	3.27E-02
121	GO:0007568: aging	3.38E-02
122	GO:0009910: negative regulation of flower development	3.38E-02
123	GO:0006810: transport	3.45E-02
124	GO:0080167: response to karrikin	3.74E-02
125	GO:0042546: cell wall biogenesis	4.45E-02
126	GO:0009644: response to high light intensity	4.57E-02

Rank	GO Term	Adjusted P value
1	GO:0010276: phytol kinase activity	0.00E+00
2	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
3	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
4	GO:0004848: ureidoglycolate hydrolase activity	6.80E-06
5	GO:0009882: blue light photoreceptor activity	1.57E-05
6	GO:0000293: ferric-chelate reductase activity	6.86E-05
7	GO:0046906: tetrapyrrole binding	1.98E-04
8	GO:0016491: oxidoreductase activity	1.98E-04
9	GO:0005089: Rho guanyl-nucleotide exchange factor activity	3.97E-04
10	GO:0004150: dihydroneopterin aldolase activity	4.43E-04
11	GO:0102083: 7,8-dihydromonapterin aldolase activity	4.43E-04
12	GO:0004180: carboxypeptidase activity	7.22E-04
13	GO:0010277: chlorophyllide a oxygenase [overall] activity	7.22E-04
14	GO:0032947: protein complex scaffold	7.22E-04
15	GO:0004148: dihydrolipoyl dehydrogenase activity	7.22E-04
16	GO:0015079: potassium ion transmembrane transporter activity	8.81E-04
17	GO:0048027: mRNA 5'-UTR binding	1.03E-03
18	GO:0016851: magnesium chelatase activity	1.03E-03
19	GO:0003727: single-stranded RNA binding	1.24E-03
20	GO:0046556: alpha-L-arabinofuranosidase activity	1.37E-03
21	GO:0004345: glucose-6-phosphate dehydrogenase activity	1.37E-03
22	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.37E-03
23	GO:0043015: gamma-tubulin binding	1.37E-03
24	GO:0010181: FMN binding	1.67E-03
25	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.74E-03
26	GO:0051011: microtubule minus-end binding	1.74E-03
27	GO:0048038: quinone binding	1.92E-03
28	GO:0004518: nuclease activity	2.04E-03
29	GO:0004605: phosphatidate cytidylyltransferase activity	2.14E-03
30	GO:0004332: fructose-bisphosphate aldolase activity	2.14E-03
31	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.36E-03
32	GO:0008237: metallopeptidase activity	2.46E-03
33	GO:0015631: tubulin binding	2.57E-03
34	GO:0019899: enzyme binding	3.03E-03
35	GO:0003724: RNA helicase activity	4.02E-03
36	GO:0071949: FAD binding	4.54E-03
37	GO:0000155: phosphorelay sensor kinase activity	7.52E-03
38	GO:0000175: 3'-5'-exoribonuclease activity	7.52E-03
39	GO:0003777: microtubule motor activity	8.73E-03
40	GO:0051536: iron-sulfur cluster binding	1.03E-02
41	GO:0022857: transmembrane transporter activity	1.06E-02
42	GO:0004176: ATP-dependent peptidase activity	1.18E-02
43	GO:0008408: 3'-5' exonuclease activity	1.18E-02
44	GO:0008080: N-acetyltransferase activity	1.67E-02
45	GO:0004872: receptor activity	1.85E-02
46	GO:0005506: iron ion binding	1.91E-02
47	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.94E-02
48	GO:0005200: structural constituent of cytoskeleton	2.33E-02
49	GO:0008483: transaminase activity	2.33E-02
50	GO:0042802: identical protein binding	2.48E-02
51	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.84E-02
52	GO:0008236: serine-type peptidase activity	2.94E-02
53	GO:0004222: metalloendopeptidase activity	3.27E-02
54	GO:0050897: cobalt ion binding	3.38E-02
55	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.75E-02
56	GO:0050661: NADP binding	3.96E-02
57	GO:0004185: serine-type carboxypeptidase activity	4.32E-02
58	GO:0051537: 2 iron, 2 sulfur cluster binding	4.57E-02
59	GO:0043621: protein self-association	4.57E-02
60	GO:0005198: structural molecule activity	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	1.11E-10
2	GO:0030286: dynein complex	1.42E-07
3	GO:0031969: chloroplast membrane	3.97E-05
4	GO:0009535: chloroplast thylakoid membrane	2.20E-04
5	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.45E-04
6	GO:0008274: gamma-tubulin ring complex	4.43E-04
7	GO:0016605: PML body	7.22E-04
8	GO:0005875: microtubule associated complex	7.25E-04
9	GO:0000923: equatorial microtubule organizing center	1.03E-03
10	GO:0009840: chloroplastic endopeptidase Clp complex	2.57E-03
11	GO:0000123: histone acetyltransferase complex	3.03E-03
12	GO:0046930: pore complex	4.02E-03
13	GO:0000922: spindle pole	4.54E-03
14	GO:0042644: chloroplast nucleoid	4.54E-03
15	GO:0016604: nuclear body	5.10E-03
16	GO:0016324: apical plasma membrane	5.67E-03
17	GO:0005578: proteinaceous extracellular matrix	7.52E-03
18	GO:0030095: chloroplast photosystem II	8.19E-03
19	GO:0043234: protein complex	9.57E-03
20	GO:0042651: thylakoid membrane	1.10E-02
21	GO:0009706: chloroplast inner membrane	1.12E-02
22	GO:0009543: chloroplast thylakoid lumen	1.41E-02
23	GO:0009505: plant-type cell wall	2.73E-02
24	GO:0019005: SCF ubiquitin ligase complex	3.05E-02
25	GO:0005773: vacuole	3.90E-02
26	GO:0031977: thylakoid lumen	4.08E-02