Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G76110

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0043488: regulation of mRNA stability0.00E+00
2GO:0061157: mRNA destabilization0.00E+00
3GO:2000469: negative regulation of peroxidase activity0.00E+00
4GO:0090706: specification of plant organ position0.00E+00
5GO:0045176: apical protein localization0.00E+00
6GO:2000121: regulation of removal of superoxide radicals0.00E+00
7GO:0007037: vacuolar phosphate transport0.00E+00
8GO:0031116: positive regulation of microtubule polymerization0.00E+00
9GO:0010068: protoderm histogenesis0.00E+00
10GO:0090697: post-embryonic plant organ morphogenesis0.00E+00
11GO:0031129: inductive cell-cell signaling0.00E+00
12GO:2001294: malonyl-CoA catabolic process0.00E+00
13GO:0051322: anaphase9.74E-05
14GO:0006021: inositol biosynthetic process9.74E-05
15GO:1902183: regulation of shoot apical meristem development1.51E-04
16GO:0010158: abaxial cell fate specification1.51E-04
17GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity2.91E-04
18GO:0006659: phosphatidylserine biosynthetic process4.05E-04
19GO:0006177: GMP biosynthetic process4.05E-04
20GO:0010450: inflorescence meristem growth4.05E-04
21GO:0051171: regulation of nitrogen compound metabolic process4.05E-04
22GO:0010482: regulation of epidermal cell division4.05E-04
23GO:1902265: abscisic acid homeostasis4.05E-04
24GO:0071028: nuclear mRNA surveillance4.05E-04
25GO:0007155: cell adhesion4.71E-04
26GO:2000024: regulation of leaf development6.89E-04
27GO:0009585: red, far-red light phototransduction7.32E-04
28GO:0042814: monopolar cell growth8.76E-04
29GO:0031125: rRNA 3'-end processing8.76E-04
30GO:0015804: neutral amino acid transport8.76E-04
31GO:0071051: polyadenylation-dependent snoRNA 3'-end processing8.76E-04
32GO:0034475: U4 snRNA 3'-end processing8.76E-04
33GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole8.76E-04
34GO:0010115: regulation of abscisic acid biosynthetic process8.76E-04
35GO:1900871: chloroplast mRNA modification8.76E-04
36GO:2000039: regulation of trichome morphogenesis8.76E-04
37GO:0007154: cell communication8.76E-04
38GO:1900033: negative regulation of trichome patterning8.76E-04
39GO:0006790: sulfur compound metabolic process1.24E-03
40GO:0001578: microtubule bundle formation1.42E-03
41GO:0045165: cell fate commitment1.42E-03
42GO:0016075: rRNA catabolic process1.42E-03
43GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'1.42E-03
44GO:0031022: nuclear migration along microfilament1.42E-03
45GO:0051127: positive regulation of actin nucleation1.42E-03
46GO:0009405: pathogenesis1.42E-03
47GO:0045604: regulation of epidermal cell differentiation1.42E-03
48GO:0006753: nucleoside phosphate metabolic process1.42E-03
49GO:0009150: purine ribonucleotide metabolic process1.42E-03
50GO:0042753: positive regulation of circadian rhythm1.99E-03
51GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly2.06E-03
52GO:0009067: aspartate family amino acid biosynthetic process2.06E-03
53GO:0006166: purine ribonucleoside salvage2.06E-03
54GO:0009647: skotomorphogenesis2.06E-03
55GO:0048645: animal organ formation2.06E-03
56GO:0010255: glucose mediated signaling pathway2.06E-03
57GO:0048530: fruit morphogenesis2.06E-03
58GO:0006164: purine nucleotide biosynthetic process2.06E-03
59GO:0009963: positive regulation of flavonoid biosynthetic process2.06E-03
60GO:0006168: adenine salvage2.06E-03
61GO:0009944: polarity specification of adaxial/abaxial axis2.20E-03
62GO:0010187: negative regulation of seed germination2.20E-03
63GO:0048629: trichome patterning2.76E-03
64GO:0009649: entrainment of circadian clock2.76E-03
65GO:0007020: microtubule nucleation2.76E-03
66GO:0032366: intracellular sterol transport2.76E-03
67GO:0009902: chloroplast relocation2.76E-03
68GO:0007623: circadian rhythm2.87E-03
69GO:0007166: cell surface receptor signaling pathway3.53E-03
70GO:0045038: protein import into chloroplast thylakoid membrane3.54E-03
71GO:0044209: AMP salvage3.54E-03
72GO:0034052: positive regulation of plant-type hypersensitive response3.54E-03
73GO:0046785: microtubule polymerization3.54E-03
74GO:0006544: glycine metabolic process3.54E-03
75GO:0046283: anthocyanin-containing compound metabolic process3.54E-03
76GO:0006561: proline biosynthetic process4.38E-03
77GO:0006563: L-serine metabolic process4.38E-03
78GO:0006751: glutathione catabolic process4.38E-03
79GO:0048827: phyllome development4.38E-03
80GO:0010264: myo-inositol hexakisphosphate biosynthetic process4.38E-03
81GO:0009959: negative gravitropism4.38E-03
82GO:0010154: fruit development4.38E-03
83GO:0009117: nucleotide metabolic process4.38E-03
84GO:0046855: inositol phosphate dephosphorylation4.38E-03
85GO:0007018: microtubule-based movement4.71E-03
86GO:0008654: phospholipid biosynthetic process5.06E-03
87GO:0048825: cotyledon development5.06E-03
88GO:0009099: valine biosynthetic process5.27E-03
89GO:0009903: chloroplast avoidance movement5.27E-03
90GO:0010189: vitamin E biosynthetic process5.27E-03
91GO:0009088: threonine biosynthetic process5.27E-03
92GO:0048444: floral organ morphogenesis5.27E-03
93GO:0009648: photoperiodism5.27E-03
94GO:0042372: phylloquinone biosynthetic process5.27E-03
95GO:0009082: branched-chain amino acid biosynthetic process5.27E-03
96GO:0048280: vesicle fusion with Golgi apparatus5.27E-03
97GO:0048367: shoot system development5.36E-03
98GO:0010583: response to cyclopentenone5.79E-03
99GO:0009740: gibberellic acid mediated signaling pathway6.04E-03
100GO:0030307: positive regulation of cell growth6.23E-03
101GO:0010161: red light signaling pathway6.23E-03
102GO:0009395: phospholipid catabolic process6.23E-03
103GO:0048528: post-embryonic root development6.23E-03
104GO:0015937: coenzyme A biosynthetic process6.23E-03
105GO:0000122: negative regulation of transcription from RNA polymerase II promoter6.23E-03
106GO:0009742: brassinosteroid mediated signaling pathway7.03E-03
107GO:0009787: regulation of abscisic acid-activated signaling pathway7.25E-03
108GO:0043068: positive regulation of programmed cell death7.25E-03
109GO:0009690: cytokinin metabolic process7.25E-03
110GO:0010078: maintenance of root meristem identity7.25E-03
111GO:0000910: cytokinesis7.41E-03
112GO:0010029: regulation of seed germination8.30E-03
113GO:0043562: cellular response to nitrogen levels8.32E-03
114GO:0010093: specification of floral organ identity8.32E-03
115GO:0010099: regulation of photomorphogenesis8.32E-03
116GO:0009097: isoleucine biosynthetic process8.32E-03
117GO:0010100: negative regulation of photomorphogenesis8.32E-03
118GO:0006997: nucleus organization8.32E-03
119GO:0009627: systemic acquired resistance8.77E-03
120GO:0048573: photoperiodism, flowering9.25E-03
121GO:0006189: 'de novo' IMP biosynthetic process9.45E-03
122GO:0006783: heme biosynthetic process9.45E-03
123GO:0009416: response to light stimulus1.04E-02
124GO:0071577: zinc II ion transmembrane transport1.06E-02
125GO:0009638: phototropism1.06E-02
126GO:0000387: spliceosomal snRNP assembly1.06E-02
127GO:0009098: leucine biosynthetic process1.06E-02
128GO:0010018: far-red light signaling pathway1.06E-02
129GO:1900865: chloroplast RNA modification1.06E-02
130GO:0048354: mucilage biosynthetic process involved in seed coat development1.06E-02
131GO:0010380: regulation of chlorophyll biosynthetic process1.06E-02
132GO:0009688: abscisic acid biosynthetic process1.19E-02
133GO:0009641: shade avoidance1.19E-02
134GO:0010192: mucilage biosynthetic process1.19E-02
135GO:0048527: lateral root development1.19E-02
136GO:0009299: mRNA transcription1.19E-02
137GO:0006896: Golgi to vacuole transport1.19E-02
138GO:0006535: cysteine biosynthetic process from serine1.19E-02
139GO:0009750: response to fructose1.31E-02
140GO:0045490: pectin catabolic process1.31E-02
141GO:0009684: indoleacetic acid biosynthetic process1.31E-02
142GO:0009773: photosynthetic electron transport in photosystem I1.31E-02
143GO:0009089: lysine biosynthetic process via diaminopimelate1.31E-02
144GO:0006415: translational termination1.31E-02
145GO:1903507: negative regulation of nucleic acid-templated transcription1.31E-02
146GO:0016024: CDP-diacylglycerol biosynthetic process1.45E-02
147GO:0010229: inflorescence development1.58E-02
148GO:0030036: actin cytoskeleton organization1.58E-02
149GO:0009725: response to hormone1.58E-02
150GO:0010588: cotyledon vascular tissue pattern formation1.58E-02
151GO:0030048: actin filament-based movement1.58E-02
152GO:0010628: positive regulation of gene expression1.58E-02
153GO:0010540: basipetal auxin transport1.73E-02
154GO:0006302: double-strand break repair1.73E-02
155GO:0048467: gynoecium development1.73E-02
156GO:0010143: cutin biosynthetic process1.73E-02
157GO:0006541: glutamine metabolic process1.73E-02
158GO:0009933: meristem structural organization1.73E-02
159GO:0090351: seedling development1.87E-02
160GO:0010030: positive regulation of seed germination1.87E-02
161GO:0046854: phosphatidylinositol phosphorylation1.87E-02
162GO:0009825: multidimensional cell growth1.87E-02
163GO:0019853: L-ascorbic acid biosynthetic process1.87E-02
164GO:0009833: plant-type primary cell wall biogenesis2.02E-02
165GO:0000162: tryptophan biosynthetic process2.02E-02
166GO:0005992: trehalose biosynthetic process2.18E-02
167GO:0019344: cysteine biosynthetic process2.18E-02
168GO:0000027: ribosomal large subunit assembly2.18E-02
169GO:0007010: cytoskeleton organization2.18E-02
170GO:0043622: cortical microtubule organization2.33E-02
171GO:0007017: microtubule-based process2.33E-02
172GO:0048511: rhythmic process2.50E-02
173GO:0051321: meiotic cell cycle2.50E-02
174GO:0003333: amino acid transmembrane transport2.50E-02
175GO:0009814: defense response, incompatible interaction2.66E-02
176GO:2000022: regulation of jasmonic acid mediated signaling pathway2.66E-02
177GO:0035428: hexose transmembrane transport2.66E-02
178GO:0009686: gibberellin biosynthetic process2.83E-02
179GO:0010214: seed coat development3.01E-02
180GO:0010091: trichome branching3.01E-02
181GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.11E-02
182GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.19E-02
183GO:0042147: retrograde transport, endosome to Golgi3.19E-02
184GO:0010087: phloem or xylem histogenesis3.37E-02
185GO:0042631: cellular response to water deprivation3.37E-02
186GO:0000226: microtubule cytoskeleton organization3.37E-02
187GO:0042335: cuticle development3.37E-02
188GO:0000271: polysaccharide biosynthetic process3.37E-02
189GO:0080022: primary root development3.37E-02
190GO:0051726: regulation of cell cycle3.43E-02
191GO:0010182: sugar mediated signaling pathway3.55E-02
192GO:0046323: glucose import3.55E-02
193GO:0009741: response to brassinosteroid3.55E-02
194GO:0008360: regulation of cell shape3.55E-02
195GO:0009958: positive gravitropism3.55E-02
196GO:0045489: pectin biosynthetic process3.55E-02
197GO:0009646: response to absence of light3.74E-02
198GO:0045892: negative regulation of transcription, DNA-templated3.80E-02
199GO:0009851: auxin biosynthetic process3.93E-02
200GO:0006623: protein targeting to vacuole3.93E-02
201GO:0009791: post-embryonic development3.93E-02
202GO:0048510: regulation of timing of transition from vegetative to reproductive phase4.12E-02
203GO:0071554: cell wall organization or biogenesis4.12E-02
204GO:0006891: intra-Golgi vesicle-mediated transport4.12E-02
205GO:0009733: response to auxin4.17E-02
206GO:0016032: viral process4.32E-02
207GO:1901657: glycosyl compound metabolic process4.52E-02
208GO:0016042: lipid catabolic process4.65E-02
209GO:0009639: response to red or far red light4.73E-02
210GO:0010252: auxin homeostasis4.73E-02
211GO:0006464: cellular protein modification process4.73E-02
212GO:0006629: lipid metabolic process4.82E-02
213GO:0007165: signal transduction4.89E-02
RankGO TermAdjusted P value
1GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
2GO:1990534: thermospermine oxidase activity0.00E+00
3GO:0010301: xanthoxin dehydrogenase activity0.00E+00
4GO:0010276: phytol kinase activity0.00E+00
5GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity0.00E+00
6GO:0008017: microtubule binding1.20E-04
7GO:0030570: pectate lyase activity3.44E-04
8GO:0010347: L-galactose-1-phosphate phosphatase activity4.05E-04
9GO:0050139: nicotinate-N-glucosyltransferase activity4.05E-04
10GO:0010945: CoA pyrophosphatase activity4.05E-04
11GO:0019210: kinase inhibitor activity4.05E-04
12GO:0010313: phytochrome binding4.05E-04
13GO:0004675: transmembrane receptor protein serine/threonine kinase activity5.39E-04
14GO:0003777: microtubule motor activity8.55E-04
15GO:0015172: acidic amino acid transmembrane transporter activity8.76E-04
16GO:0050017: L-3-cyanoalanine synthase activity8.76E-04
17GO:0017118: lipoyltransferase activity8.76E-04
18GO:0003839: gamma-glutamylcyclotransferase activity8.76E-04
19GO:0043425: bHLH transcription factor binding8.76E-04
20GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity8.76E-04
21GO:0003938: IMP dehydrogenase activity8.76E-04
22GO:0052832: inositol monophosphate 3-phosphatase activity8.76E-04
23GO:0080097: L-tryptophan:pyruvate aminotransferase activity8.76E-04
24GO:0008934: inositol monophosphate 1-phosphatase activity8.76E-04
25GO:0052833: inositol monophosphate 4-phosphatase activity8.76E-04
26GO:0015929: hexosaminidase activity8.76E-04
27GO:0004563: beta-N-acetylhexosaminidase activity8.76E-04
28GO:0004512: inositol-3-phosphate synthase activity8.76E-04
29GO:0042802: identical protein binding9.32E-04
30GO:0016788: hydrolase activity, acting on ester bonds1.36E-03
31GO:0004049: anthranilate synthase activity1.42E-03
32GO:0090729: toxin activity1.42E-03
33GO:0047627: adenylylsulfatase activity2.06E-03
34GO:0052654: L-leucine transaminase activity2.06E-03
35GO:0052655: L-valine transaminase activity2.06E-03
36GO:0004072: aspartate kinase activity2.06E-03
37GO:0015175: neutral amino acid transmembrane transporter activity2.06E-03
38GO:0035529: NADH pyrophosphatase activity2.06E-03
39GO:0003999: adenine phosphoribosyltransferase activity2.06E-03
40GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity2.06E-03
41GO:0017172: cysteine dioxygenase activity2.06E-03
42GO:0052656: L-isoleucine transaminase activity2.06E-03
43GO:0008408: 3'-5' exonuclease activity2.67E-03
44GO:0080032: methyl jasmonate esterase activity2.76E-03
45GO:0004084: branched-chain-amino-acid transaminase activity2.76E-03
46GO:0004372: glycine hydroxymethyltransferase activity3.54E-03
47GO:0016846: carbon-sulfur lyase activity3.54E-03
48GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity4.38E-03
49GO:0004605: phosphatidate cytidylyltransferase activity4.38E-03
50GO:0001085: RNA polymerase II transcription factor binding4.38E-03
51GO:0000210: NAD+ diphosphatase activity4.38E-03
52GO:0000293: ferric-chelate reductase activity4.38E-03
53GO:0016208: AMP binding4.38E-03
54GO:0004366: glycerol-3-phosphate O-acyltransferase activity4.38E-03
55GO:0016462: pyrophosphatase activity4.38E-03
56GO:0042578: phosphoric ester hydrolase activity4.38E-03
57GO:0019901: protein kinase binding5.06E-03
58GO:0004124: cysteine synthase activity5.27E-03
59GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity5.27E-03
60GO:0003730: mRNA 3'-UTR binding5.27E-03
61GO:0043022: ribosome binding7.25E-03
62GO:0030247: polysaccharide binding9.25E-03
63GO:0003747: translation release factor activity9.45E-03
64GO:0016829: lyase activity9.61E-03
65GO:0046872: metal ion binding9.62E-03
66GO:0004693: cyclin-dependent protein serine/threonine kinase activity1.13E-02
67GO:0004805: trehalose-phosphatase activity1.19E-02
68GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding1.19E-02
69GO:0047372: acylglycerol lipase activity1.31E-02
70GO:0008794: arsenate reductase (glutaredoxin) activity1.31E-02
71GO:0000976: transcription regulatory region sequence-specific DNA binding1.45E-02
72GO:0031072: heat shock protein binding1.58E-02
73GO:0000175: 3'-5'-exoribonuclease activity1.58E-02
74GO:0008081: phosphoric diester hydrolase activity1.58E-02
75GO:0004022: alcohol dehydrogenase (NAD) activity1.58E-02
76GO:0008131: primary amine oxidase activity1.73E-02
77GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.73E-02
78GO:0008146: sulfotransferase activity1.87E-02
79GO:0005385: zinc ion transmembrane transporter activity2.18E-02
80GO:0005528: FK506 binding2.18E-02
81GO:0003714: transcription corepressor activity2.18E-02
82GO:0008324: cation transmembrane transporter activity2.33E-02
83GO:0019706: protein-cysteine S-palmitoyltransferase activity2.50E-02
84GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.66E-02
85GO:0016760: cellulose synthase (UDP-forming) activity2.83E-02
86GO:0003727: single-stranded RNA binding3.01E-02
87GO:0052689: carboxylic ester hydrolase activity3.38E-02
88GO:0044212: transcription regulatory region DNA binding3.45E-02
89GO:0005355: glucose transmembrane transporter activity3.74E-02
90GO:0004871: signal transducer activity3.95E-02
91GO:0003824: catalytic activity4.02E-02
92GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen4.16E-02
93GO:0000156: phosphorelay response regulator activity4.52E-02
94GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding4.60E-02
95GO:0016759: cellulose synthase activity4.73E-02
96GO:0016791: phosphatase activity4.73E-02
97GO:0016722: oxidoreductase activity, oxidizing metal ions4.93E-02
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Gene type



Gene DE type