gene detail

Gene description

TAIR ID: AT1G17220

Short description: Translation initiation factor 2, small GTP-binding protein

Pathogen responsiveness: 0.08

General responsiveness: 1.81

Orthologous

Rice:

OS05G0575300 OS09G0515500

Maize:

GRMZM2G007038

Wheat: No orthologous gene

GO biological process

translational initiation

GO cellular component

chloroplast envelope, chloroplast, chloroplast stroma

GO molecular function

GTPase activity, GTP binding, translation initiation factor activity

Protein domain

Pfam	PF11987, Translation-initiation factor 2
Pfam	PF00009, Elongation factor Tu GTP binding domain

Metabolic pathway

PWY-1801: formaldehyde oxidation II (glutathione-dependent)

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT2G43010, AT5G14750

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

24 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	-1.68	1.56E-03
GSE17464	Laer, control	Laer, Flg22 2 h	-1.57	1.02E-03
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.34	5.47E-09
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	-1.81	5.49E-07
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.54	4.02E-13
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-2.02	1.41E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.36	1.25E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.91	3.13E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.99	3.99E-14
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.12	1.25E-12
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.92	2.81E-04
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.94	4.48E-08
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-2.51	1.30E-14
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	-1.94	7.18E-10
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-2.13	2.72E-11
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-1.92	6.35E-10
GSE56094	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.79	5.50E-08
GSE56094	Col, WT, control 7 h	Col, WT, hrpA- 7 h	-1.67	6.40E-07
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	-1.78	1.56E-08
GSE56094	Col, WT, control 8 h	Col, WT, hrpA- 8 h	-1.52	2.23E-06
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	-1.98	7.15E-10
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-2.16	1.14E-03
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.89	8.49E-05
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	-1.62	1.16E-02