GO Enrichment Analysis of Co-expressed Genes with
AT1G17220
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 2 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 3 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 4 | GO:0006003: fructose 2,6-bisphosphate metabolic process | 0.00E+00 |
| 5 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 6 | GO:0009773: photosynthetic electron transport in photosystem I | 2.97E-09 |
| 7 | GO:0009658: chloroplast organization | 9.61E-08 |
| 8 | GO:0032544: plastid translation | 1.60E-07 |
| 9 | GO:0071482: cellular response to light stimulus | 1.60E-07 |
| 10 | GO:0015979: photosynthesis | 2.85E-07 |
| 11 | GO:0006000: fructose metabolic process | 6.25E-07 |
| 12 | GO:0045727: positive regulation of translation | 2.92E-06 |
| 13 | GO:0010196: nonphotochemical quenching | 1.52E-05 |
| 14 | GO:0009704: de-etiolation | 2.02E-05 |
| 15 | GO:0006002: fructose 6-phosphate metabolic process | 2.60E-05 |
| 16 | GO:0071277: cellular response to calcium ion | 5.18E-05 |
| 17 | GO:0000481: maturation of 5S rRNA | 5.18E-05 |
| 18 | GO:0043609: regulation of carbon utilization | 5.18E-05 |
| 19 | GO:0034337: RNA folding | 5.18E-05 |
| 20 | GO:0006352: DNA-templated transcription, initiation | 5.75E-05 |
| 21 | GO:0006810: transport | 6.82E-05 |
| 22 | GO:0009767: photosynthetic electron transport chain | 7.84E-05 |
| 23 | GO:0034755: iron ion transmembrane transport | 1.27E-04 |
| 24 | GO:0009662: etioplast organization | 1.27E-04 |
| 25 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.27E-04 |
| 26 | GO:0010270: photosystem II oxygen evolving complex assembly | 1.27E-04 |
| 27 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.45E-04 |
| 28 | GO:2001141: regulation of RNA biosynthetic process | 3.17E-04 |
| 29 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 3.17E-04 |
| 30 | GO:0009152: purine ribonucleotide biosynthetic process | 3.17E-04 |
| 31 | GO:0046653: tetrahydrofolate metabolic process | 3.17E-04 |
| 32 | GO:0015994: chlorophyll metabolic process | 4.24E-04 |
| 33 | GO:0071483: cellular response to blue light | 4.24E-04 |
| 34 | GO:0010027: thylakoid membrane organization | 4.83E-04 |
| 35 | GO:0045893: positive regulation of transcription, DNA-templated | 5.27E-04 |
| 36 | GO:0006564: L-serine biosynthetic process | 5.39E-04 |
| 37 | GO:0006461: protein complex assembly | 5.39E-04 |
| 38 | GO:0018298: protein-chromophore linkage | 6.24E-04 |
| 39 | GO:0006828: manganese ion transport | 6.60E-04 |
| 40 | GO:0009637: response to blue light | 7.83E-04 |
| 41 | GO:0010019: chloroplast-nucleus signaling pathway | 7.87E-04 |
| 42 | GO:0009645: response to low light intensity stimulus | 9.18E-04 |
| 43 | GO:0010114: response to red light | 9.96E-04 |
| 44 | GO:0032508: DNA duplex unwinding | 1.06E-03 |
| 45 | GO:0010492: maintenance of shoot apical meristem identity | 1.06E-03 |
| 46 | GO:0009657: plastid organization | 1.20E-03 |
| 47 | GO:0006364: rRNA processing | 1.32E-03 |
| 48 | GO:0048507: meristem development | 1.35E-03 |
| 49 | GO:0090333: regulation of stomatal closure | 1.35E-03 |
| 50 | GO:0006816: calcium ion transport | 1.84E-03 |
| 51 | GO:0006415: translational termination | 1.84E-03 |
| 52 | GO:0006879: cellular iron ion homeostasis | 1.84E-03 |
| 53 | GO:0000272: polysaccharide catabolic process | 1.84E-03 |
| 54 | GO:0009750: response to fructose | 1.84E-03 |
| 55 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.84E-03 |
| 56 | GO:0005983: starch catabolic process | 2.01E-03 |
| 57 | GO:0010628: positive regulation of gene expression | 2.19E-03 |
| 58 | GO:0006094: gluconeogenesis | 2.19E-03 |
| 59 | GO:0005986: sucrose biosynthetic process | 2.19E-03 |
| 60 | GO:0090351: seedling development | 2.56E-03 |
| 61 | GO:0016575: histone deacetylation | 3.16E-03 |
| 62 | GO:0016226: iron-sulfur cluster assembly | 3.59E-03 |
| 63 | GO:0016117: carotenoid biosynthetic process | 4.26E-03 |
| 64 | GO:0042631: cellular response to water deprivation | 4.49E-03 |
| 65 | GO:0045454: cell redox homeostasis | 7.27E-03 |
| 66 | GO:0016311: dephosphorylation | 8.17E-03 |
| 67 | GO:0030244: cellulose biosynthetic process | 8.46E-03 |
| 68 | GO:0006499: N-terminal protein myristoylation | 9.06E-03 |
| 69 | GO:0010218: response to far red light | 9.06E-03 |
| 70 | GO:0009409: response to cold | 9.53E-03 |
| 71 | GO:0008152: metabolic process | 9.89E-03 |
| 72 | GO:0009853: photorespiration | 9.99E-03 |
| 73 | GO:0009644: response to high light intensity | 1.26E-02 |
| 74 | GO:0006855: drug transmembrane transport | 1.33E-02 |
| 75 | GO:0009664: plant-type cell wall organization | 1.40E-02 |
| 76 | GO:0009735: response to cytokinin | 1.46E-02 |
| 77 | GO:0006417: regulation of translation | 1.58E-02 |
| 78 | GO:0009611: response to wounding | 1.63E-02 |
| 79 | GO:0009058: biosynthetic process | 2.31E-02 |
| 80 | GO:0040008: regulation of growth | 2.70E-02 |
| 81 | GO:0007623: circadian rhythm | 2.79E-02 |
| 82 | GO:0010468: regulation of gene expression | 3.17E-02 |
| 83 | GO:0042742: defense response to bacterium | 3.24E-02 |
| 84 | GO:0009826: unidimensional cell growth | 3.71E-02 |
| 85 | GO:0080167: response to karrikin | 4.44E-02 |
| 86 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.55E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000979: RNA polymerase II core promoter sequence-specific DNA binding | 0.00E+00 |
| 2 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 3 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 4 | GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity | 0.00E+00 |
| 5 | GO:0003873: 6-phosphofructo-2-kinase activity | 0.00E+00 |
| 6 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 7 | GO:0046608: carotenoid isomerase activity | 0.00E+00 |
| 8 | GO:0001053: plastid sigma factor activity | 2.92E-06 |
| 9 | GO:0016987: sigma factor activity | 2.92E-06 |
| 10 | GO:0009496: plastoquinol--plastocyanin reductase activity | 5.18E-05 |
| 11 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 5.18E-05 |
| 12 | GO:0031409: pigment binding | 1.16E-04 |
| 13 | GO:0047746: chlorophyllase activity | 1.27E-04 |
| 14 | GO:0010297: heteropolysaccharide binding | 1.27E-04 |
| 15 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.27E-04 |
| 16 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.27E-04 |
| 17 | GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | 2.17E-04 |
| 18 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 2.17E-04 |
| 19 | GO:0008864: formyltetrahydrofolate deformylase activity | 2.17E-04 |
| 20 | GO:0050662: coenzyme binding | 2.91E-04 |
| 21 | GO:0048487: beta-tubulin binding | 3.17E-04 |
| 22 | GO:0016149: translation release factor activity, codon specific | 3.17E-04 |
| 23 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 4.24E-04 |
| 24 | GO:0016168: chlorophyll binding | 5.10E-04 |
| 25 | GO:2001070: starch binding | 6.60E-04 |
| 26 | GO:0004222: metalloendopeptidase activity | 6.85E-04 |
| 27 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 7.87E-04 |
| 28 | GO:0004033: aldo-keto reductase (NADP) activity | 1.06E-03 |
| 29 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 1.20E-03 |
| 30 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.32E-03 |
| 31 | GO:0003747: translation release factor activity | 1.35E-03 |
| 32 | GO:0005381: iron ion transmembrane transporter activity | 1.50E-03 |
| 33 | GO:0005384: manganese ion transmembrane transporter activity | 1.50E-03 |
| 34 | GO:0016874: ligase activity | 1.76E-03 |
| 35 | GO:0015386: potassium:proton antiporter activity | 1.84E-03 |
| 36 | GO:0004022: alcohol dehydrogenase (NAD) activity | 2.19E-03 |
| 37 | GO:0015095: magnesium ion transmembrane transporter activity | 2.19E-03 |
| 38 | GO:0031072: heat shock protein binding | 2.19E-03 |
| 39 | GO:0019843: rRNA binding | 2.32E-03 |
| 40 | GO:0008266: poly(U) RNA binding | 2.38E-03 |
| 41 | GO:0046872: metal ion binding | 2.48E-03 |
| 42 | GO:0051536: iron-sulfur cluster binding | 2.96E-03 |
| 43 | GO:0004407: histone deacetylase activity | 2.96E-03 |
| 44 | GO:0015079: potassium ion transmembrane transporter activity | 3.16E-03 |
| 45 | GO:0016787: hydrolase activity | 3.90E-03 |
| 46 | GO:0048038: quinone binding | 5.46E-03 |
| 47 | GO:0008237: metallopeptidase activity | 6.49E-03 |
| 48 | GO:0016597: amino acid binding | 6.76E-03 |
| 49 | GO:0003824: catalytic activity | 7.30E-03 |
| 50 | GO:0004721: phosphoprotein phosphatase activity | 7.88E-03 |
| 51 | GO:0015238: drug transmembrane transporter activity | 8.76E-03 |
| 52 | GO:0043621: protein self-association | 1.26E-02 |
| 53 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.26E-02 |
| 54 | GO:0051287: NAD binding | 1.37E-02 |
| 55 | GO:0051082: unfolded protein binding | 1.89E-02 |
| 56 | GO:0015297: antiporter activity | 2.70E-02 |
| 57 | GO:0003723: RNA binding | 2.73E-02 |
| 58 | GO:0005509: calcium ion binding | 2.99E-02 |
| 59 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 3.31E-02 |
| 60 | GO:0005215: transporter activity | 3.58E-02 |
| 61 | GO:0008168: methyltransferase activity | 3.71E-02 |
| 62 | GO:0016491: oxidoreductase activity | 4.25E-02 |
| 63 | GO:0003729: mRNA binding | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 2.56E-28 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 1.12E-19 |
| 4 | GO:0009941: chloroplast envelope | 1.47E-15 |
| 5 | GO:0009534: chloroplast thylakoid | 2.10E-11 |
| 6 | GO:0009570: chloroplast stroma | 1.31E-09 |
| 7 | GO:0031969: chloroplast membrane | 5.68E-09 |
| 8 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.29E-07 |
| 9 | GO:0010287: plastoglobule | 3.34E-07 |
| 10 | GO:0030095: chloroplast photosystem II | 1.17E-06 |
| 11 | GO:0009579: thylakoid | 5.91E-06 |
| 12 | GO:0009782: photosystem I antenna complex | 5.18E-05 |
| 13 | GO:0009344: nitrite reductase complex [NAD(P)H] | 5.18E-05 |
| 14 | GO:0030076: light-harvesting complex | 1.02E-04 |
| 15 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 1.27E-04 |
| 16 | GO:0042651: thylakoid membrane | 1.45E-04 |
| 17 | GO:0009654: photosystem II oxygen evolving complex | 1.45E-04 |
| 18 | GO:0009543: chloroplast thylakoid lumen | 2.30E-04 |
| 19 | GO:0019898: extrinsic component of membrane | 3.13E-04 |
| 20 | GO:0009512: cytochrome b6f complex | 5.39E-04 |
| 21 | GO:0009533: chloroplast stromal thylakoid | 9.18E-04 |
| 22 | GO:0016021: integral component of membrane | 1.13E-03 |
| 23 | GO:0009706: chloroplast inner membrane | 1.86E-03 |
| 24 | GO:0032040: small-subunit processome | 2.01E-03 |
| 25 | GO:0009522: photosystem I | 4.96E-03 |
| 26 | GO:0009523: photosystem II | 5.21E-03 |
| 27 | GO:0010319: stromule | 6.49E-03 |
| 28 | GO:0016020: membrane | 6.49E-03 |
| 29 | GO:0009536: plastid | 8.40E-03 |
| 30 | GO:0009707: chloroplast outer membrane | 8.46E-03 |
| 31 | GO:0031977: thylakoid lumen | 1.13E-02 |
| 32 | GO:0048046: apoplast | 3.31E-02 |