GO Enrichment Analysis of Co-expressed Genes with
AT1G17220
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0017038: protein import | 0.00E+00 |
| 2 | GO:0090706: specification of plant organ position | 0.00E+00 |
| 3 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 4 | GO:1901698: response to nitrogen compound | 0.00E+00 |
| 5 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 6 | GO:0000481: maturation of 5S rRNA | 4.45E-05 |
| 7 | GO:0034628: 'de novo' NAD biosynthetic process from aspartate | 4.45E-05 |
| 8 | GO:0034337: RNA folding | 4.45E-05 |
| 9 | GO:0010450: inflorescence meristem growth | 4.45E-05 |
| 10 | GO:0010207: photosystem II assembly | 7.22E-05 |
| 11 | GO:0015979: photosynthesis | 7.48E-05 |
| 12 | GO:0080151: positive regulation of salicylic acid mediated signaling pathway | 1.10E-04 |
| 13 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.10E-04 |
| 14 | GO:0051176: positive regulation of sulfur metabolic process | 1.89E-04 |
| 15 | GO:0006696: ergosterol biosynthetic process | 1.89E-04 |
| 16 | GO:0045165: cell fate commitment | 1.89E-04 |
| 17 | GO:0006000: fructose metabolic process | 1.89E-04 |
| 18 | GO:0006013: mannose metabolic process | 1.89E-04 |
| 19 | GO:0071705: nitrogen compound transport | 1.89E-04 |
| 20 | GO:0009800: cinnamic acid biosynthetic process | 2.78E-04 |
| 21 | GO:0010109: regulation of photosynthesis | 3.73E-04 |
| 22 | GO:0071249: cellular response to nitrate | 3.73E-04 |
| 23 | GO:0015994: chlorophyll metabolic process | 3.73E-04 |
| 24 | GO:0006564: L-serine biosynthetic process | 4.75E-04 |
| 25 | GO:0045038: protein import into chloroplast thylakoid membrane | 4.75E-04 |
| 26 | GO:1902183: regulation of shoot apical meristem development | 4.75E-04 |
| 27 | GO:0009435: NAD biosynthetic process | 4.75E-04 |
| 28 | GO:0010158: abaxial cell fate specification | 4.75E-04 |
| 29 | GO:0006354: DNA-templated transcription, elongation | 5.82E-04 |
| 30 | GO:0042549: photosystem II stabilization | 5.82E-04 |
| 31 | GO:0006559: L-phenylalanine catabolic process | 5.82E-04 |
| 32 | GO:0009644: response to high light intensity | 8.93E-04 |
| 33 | GO:0006402: mRNA catabolic process | 9.32E-04 |
| 34 | GO:0006605: protein targeting | 9.32E-04 |
| 35 | GO:0032508: DNA duplex unwinding | 9.32E-04 |
| 36 | GO:0010093: specification of floral organ identity | 1.06E-03 |
| 37 | GO:0009699: phenylpropanoid biosynthetic process | 1.06E-03 |
| 38 | GO:0006002: fructose 6-phosphate metabolic process | 1.06E-03 |
| 39 | GO:0009657: plastid organization | 1.06E-03 |
| 40 | GO:0009821: alkaloid biosynthetic process | 1.19E-03 |
| 41 | GO:2000024: regulation of leaf development | 1.19E-03 |
| 42 | GO:0000373: Group II intron splicing | 1.19E-03 |
| 43 | GO:0009060: aerobic respiration | 1.19E-03 |
| 44 | GO:0009750: response to fructose | 1.61E-03 |
| 45 | GO:0009698: phenylpropanoid metabolic process | 1.61E-03 |
| 46 | GO:0009773: photosynthetic electron transport in photosystem I | 1.61E-03 |
| 47 | GO:0015706: nitrate transport | 1.77E-03 |
| 48 | GO:0005983: starch catabolic process | 1.77E-03 |
| 49 | GO:2000028: regulation of photoperiodism, flowering | 1.92E-03 |
| 50 | GO:0009718: anthocyanin-containing compound biosynthetic process | 1.92E-03 |
| 51 | GO:0006094: gluconeogenesis | 1.92E-03 |
| 52 | GO:0005986: sucrose biosynthetic process | 1.92E-03 |
| 53 | GO:0009933: meristem structural organization | 2.09E-03 |
| 54 | GO:0010167: response to nitrate | 2.25E-03 |
| 55 | GO:0006636: unsaturated fatty acid biosynthetic process | 2.42E-03 |
| 56 | GO:0009944: polarity specification of adaxial/abaxial axis | 2.60E-03 |
| 57 | GO:0007623: circadian rhythm | 2.63E-03 |
| 58 | GO:0016226: iron-sulfur cluster assembly | 3.14E-03 |
| 59 | GO:0030433: ubiquitin-dependent ERAD pathway | 3.14E-03 |
| 60 | GO:0006284: base-excision repair | 3.53E-03 |
| 61 | GO:0016117: carotenoid biosynthetic process | 3.73E-03 |
| 62 | GO:0010154: fruit development | 4.14E-03 |
| 63 | GO:0009646: response to absence of light | 4.35E-03 |
| 64 | GO:0080167: response to karrikin | 5.00E-03 |
| 65 | GO:0010090: trichome morphogenesis | 5.22E-03 |
| 66 | GO:0042128: nitrate assimilation | 6.64E-03 |
| 67 | GO:0015995: chlorophyll biosynthetic process | 6.89E-03 |
| 68 | GO:0016311: dephosphorylation | 7.14E-03 |
| 69 | GO:0018298: protein-chromophore linkage | 7.39E-03 |
| 70 | GO:0006397: mRNA processing | 7.69E-03 |
| 71 | GO:0010114: response to red light | 1.04E-02 |
| 72 | GO:0000209: protein polyubiquitination | 1.07E-02 |
| 73 | GO:0006855: drug transmembrane transport | 1.16E-02 |
| 74 | GO:0006364: rRNA processing | 1.28E-02 |
| 75 | GO:0009585: red, far-red light phototransduction | 1.28E-02 |
| 76 | GO:0009737: response to abscisic acid | 1.32E-02 |
| 77 | GO:0009611: response to wounding | 1.34E-02 |
| 78 | GO:0009909: regulation of flower development | 1.38E-02 |
| 79 | GO:0006417: regulation of translation | 1.38E-02 |
| 80 | GO:0009626: plant-type hypersensitive response | 1.51E-02 |
| 81 | GO:0055085: transmembrane transport | 1.67E-02 |
| 82 | GO:0006396: RNA processing | 1.68E-02 |
| 83 | GO:0009058: biosynthetic process | 2.01E-02 |
| 84 | GO:0006979: response to oxidative stress | 2.68E-02 |
| 85 | GO:0009658: chloroplast organization | 3.32E-02 |
| 86 | GO:0042254: ribosome biogenesis | 3.36E-02 |
| 87 | GO:0009409: response to cold | 3.60E-02 |
| 88 | GO:0009723: response to ethylene | 3.68E-02 |
| 89 | GO:0046777: protein autophosphorylation | 4.06E-02 |
| 90 | GO:0006886: intracellular protein transport | 4.50E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity | 0.00E+00 |
| 2 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 3 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 4 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 5 | GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity | 0.00E+00 |
| 6 | GO:0008987: quinolinate synthetase A activity | 0.00E+00 |
| 7 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 8 | GO:0051996: squalene synthase activity | 4.45E-05 |
| 9 | GO:0005528: FK506 binding | 1.05E-04 |
| 10 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 1.10E-04 |
| 11 | GO:0047746: chlorophyllase activity | 1.10E-04 |
| 12 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.10E-04 |
| 13 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.10E-04 |
| 14 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 1.10E-04 |
| 15 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 1.89E-04 |
| 16 | GO:0045548: phenylalanine ammonia-lyase activity | 1.89E-04 |
| 17 | GO:0008725: DNA-3-methyladenine glycosylase activity | 4.75E-04 |
| 18 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 4.75E-04 |
| 19 | GO:0004559: alpha-mannosidase activity | 6.94E-04 |
| 20 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 9.59E-04 |
| 21 | GO:0016844: strictosidine synthase activity | 1.32E-03 |
| 22 | GO:0008047: enzyme activator activity | 1.47E-03 |
| 23 | GO:0022891: substrate-specific transmembrane transporter activity | 3.33E-03 |
| 24 | GO:0003727: single-stranded RNA binding | 3.53E-03 |
| 25 | GO:0003723: RNA binding | 5.80E-03 |
| 26 | GO:0016597: amino acid binding | 5.91E-03 |
| 27 | GO:0016168: chlorophyll binding | 6.39E-03 |
| 28 | GO:0015238: drug transmembrane transporter activity | 7.65E-03 |
| 29 | GO:0004222: metalloendopeptidase activity | 7.91E-03 |
| 30 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 8.18E-03 |
| 31 | GO:0051539: 4 iron, 4 sulfur cluster binding | 9.55E-03 |
| 32 | GO:0004185: serine-type carboxypeptidase activity | 1.04E-02 |
| 33 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.10E-02 |
| 34 | GO:0043621: protein self-association | 1.10E-02 |
| 35 | GO:0051287: NAD binding | 1.19E-02 |
| 36 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.28E-02 |
| 37 | GO:0016787: hydrolase activity | 1.33E-02 |
| 38 | GO:0031625: ubiquitin protein ligase binding | 1.38E-02 |
| 39 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.31E-02 |
| 40 | GO:0015297: antiporter activity | 2.35E-02 |
| 41 | GO:0003743: translation initiation factor activity | 2.72E-02 |
| 42 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.88E-02 |
| 43 | GO:0042802: identical protein binding | 2.88E-02 |
| 44 | GO:0046872: metal ion binding | 3.13E-02 |
| 45 | GO:0016788: hydrolase activity, acting on ester bonds | 3.36E-02 |
| 46 | GO:0050660: flavin adenine dinucleotide binding | 3.68E-02 |
| 47 | GO:0003729: mRNA binding | 3.95E-02 |
| 48 | GO:0061630: ubiquitin protein ligase activity | 4.01E-02 |
| 49 | GO:0042803: protein homodimerization activity | 4.55E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.46E-12 |
| 2 | GO:0009570: chloroplast stroma | 6.88E-06 |
| 3 | GO:0000428: DNA-directed RNA polymerase complex | 4.45E-05 |
| 4 | GO:0009534: chloroplast thylakoid | 4.83E-05 |
| 5 | GO:0080085: signal recognition particle, chloroplast targeting | 1.10E-04 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 1.16E-04 |
| 7 | GO:0009523: photosystem II | 2.57E-04 |
| 8 | GO:0030529: intracellular ribonucleoprotein complex | 3.99E-04 |
| 9 | GO:0031969: chloroplast membrane | 6.28E-04 |
| 10 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 1.06E-03 |
| 11 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.19E-03 |
| 12 | GO:0005763: mitochondrial small ribosomal subunit | 1.19E-03 |
| 13 | GO:0032040: small-subunit processome | 1.77E-03 |
| 14 | GO:0010287: plastoglobule | 1.82E-03 |
| 15 | GO:0009543: chloroplast thylakoid lumen | 1.92E-03 |
| 16 | GO:0000312: plastid small ribosomal subunit | 2.09E-03 |
| 17 | GO:0009941: chloroplast envelope | 2.39E-03 |
| 18 | GO:0009522: photosystem I | 4.35E-03 |
| 19 | GO:0009295: nucleoid | 5.68E-03 |
| 20 | GO:0009579: thylakoid | 1.57E-02 |
| 21 | GO:0009706: chloroplast inner membrane | 1.65E-02 |
| 22 | GO:0005623: cell | 1.97E-02 |
| 23 | GO:0009505: plant-type cell wall | 3.34E-02 |
| 24 | GO:0005773: vacuole | 4.14E-02 |