co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G12610

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070328: triglyceride homeostasis	0.00E+00
2	GO:0055091: phospholipid homeostasis	0.00E+00
3	GO:0035024: negative regulation of Rho protein signal transduction	0.00E+00
4	GO:0080021: response to benzoic acid	0.00E+00
5	GO:0032953: regulation of (1->3)-beta-D-glucan biosynthetic process	0.00E+00
6	GO:0009873: ethylene-activated signaling pathway	1.13E-06
7	GO:0035435: phosphate ion transmembrane transport	1.04E-04
8	GO:0010200: response to chitin	1.09E-04
9	GO:0009737: response to abscisic acid	1.58E-04
10	GO:0009611: response to wounding	1.97E-04
11	GO:0009415: response to water	2.38E-04
12	GO:1902265: abscisic acid homeostasis	2.55E-04
13	GO:0051180: vitamin transport	2.55E-04
14	GO:0030974: thiamine pyrophosphate transport	2.55E-04
15	GO:0009865: pollen tube adhesion	2.55E-04
16	GO:0006680: glucosylceramide catabolic process	2.55E-04
17	GO:0006898: receptor-mediated endocytosis	5.64E-04
18	GO:0015893: drug transport	5.64E-04
19	GO:1901679: nucleotide transmembrane transport	5.64E-04
20	GO:0015786: UDP-glucose transport	5.64E-04
21	GO:0010507: negative regulation of autophagy	5.64E-04
22	GO:0015709: thiosulfate transport	5.64E-04
23	GO:0071422: succinate transmembrane transport	5.64E-04
24	GO:0031407: oxylipin metabolic process	5.64E-04
25	GO:0010289: homogalacturonan biosynthetic process	5.64E-04
26	GO:0055088: lipid homeostasis	5.64E-04
27	GO:0018107: peptidyl-threonine phosphorylation	7.37E-04
28	GO:0006811: ion transport	7.38E-04
29	GO:0009631: cold acclimation	7.84E-04
30	GO:0080121: AMP transport	9.15E-04
31	GO:0046786: viral replication complex formation and maintenance	9.15E-04
32	GO:0080168: abscisic acid transport	9.15E-04
33	GO:0044210: 'de novo' CTP biosynthetic process	9.15E-04
34	GO:0016045: detection of bacterium	9.15E-04
35	GO:0010359: regulation of anion channel activity	9.15E-04
36	GO:0090630: activation of GTPase activity	9.15E-04
37	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	9.15E-04
38	GO:0015783: GDP-fucose transport	9.15E-04
39	GO:0006839: mitochondrial transport	1.03E-03
40	GO:0009695: jasmonic acid biosynthetic process	1.25E-03
41	GO:0055089: fatty acid homeostasis	1.31E-03
42	GO:0015729: oxaloacetate transport	1.31E-03
43	GO:0072334: UDP-galactose transmembrane transport	1.31E-03
44	GO:0031408: oxylipin biosynthetic process	1.37E-03
45	GO:0006355: regulation of transcription, DNA-templated	1.45E-03
46	GO:0042538: hyperosmotic salinity response	1.60E-03
47	GO:0001944: vasculature development	1.63E-03
48	GO:0022622: root system development	1.75E-03
49	GO:0006221: pyrimidine nucleotide biosynthetic process	1.75E-03
50	GO:0015867: ATP transport	1.75E-03
51	GO:0071585: detoxification of cadmium ion	1.75E-03
52	GO:0009687: abscisic acid metabolic process	1.75E-03
53	GO:0046345: abscisic acid catabolic process	1.75E-03
54	GO:0042631: cellular response to water deprivation	2.07E-03
55	GO:0070897: DNA-templated transcriptional preinitiation complex assembly	2.23E-03
56	GO:0071423: malate transmembrane transport	2.23E-03
57	GO:0006656: phosphatidylcholine biosynthetic process	2.23E-03
58	GO:0045487: gibberellin catabolic process	2.23E-03
59	GO:0009697: salicylic acid biosynthetic process	2.23E-03
60	GO:0006873: cellular ion homeostasis	2.23E-03
61	GO:0048497: maintenance of floral organ identity	2.23E-03
62	GO:0032957: inositol trisphosphate metabolic process	2.23E-03
63	GO:0009247: glycolipid biosynthetic process	2.23E-03
64	GO:0048868: pollen tube development	2.24E-03
65	GO:1900425: negative regulation of defense response to bacterium	2.75E-03
66	GO:0010337: regulation of salicylic acid metabolic process	2.75E-03
67	GO:0015866: ADP transport	2.75E-03
68	GO:0006351: transcription, DNA-templated	2.98E-03
69	GO:0009414: response to water deprivation	3.10E-03
70	GO:2000033: regulation of seed dormancy process	3.30E-03
71	GO:0098655: cation transmembrane transport	3.30E-03
72	GO:0009639: response to red or far red light	3.33E-03
73	GO:0008272: sulfate transport	3.89E-03
74	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	3.89E-03
75	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	3.89E-03
76	GO:0032880: regulation of protein localization	3.89E-03
77	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	3.89E-03
78	GO:0006955: immune response	3.89E-03
79	GO:0009819: drought recovery	4.52E-03
80	GO:0009938: negative regulation of gibberellic acid mediated signaling pathway	4.52E-03
81	GO:0019375: galactolipid biosynthetic process	4.52E-03
82	GO:2000070: regulation of response to water deprivation	4.52E-03
83	GO:0007155: cell adhesion	4.52E-03
84	GO:0009061: anaerobic respiration	4.52E-03
85	GO:0009751: response to salicylic acid	4.86E-03
86	GO:0048193: Golgi vesicle transport	5.18E-03
87	GO:0045490: pectin catabolic process	5.49E-03
88	GO:0098656: anion transmembrane transport	5.86E-03
89	GO:0009409: response to cold	5.90E-03
90	GO:0007346: regulation of mitotic cell cycle	6.58E-03
91	GO:0010468: regulation of gene expression	6.88E-03
92	GO:0009641: shade avoidance	7.33E-03
93	GO:0009698: phenylpropanoid metabolic process	8.11E-03
94	GO:0052544: defense response by callose deposition in cell wall	8.11E-03
95	GO:0018119: peptidyl-cysteine S-nitrosylation	8.11E-03
96	GO:0030148: sphingolipid biosynthetic process	8.11E-03
97	GO:0010015: root morphogenesis	8.11E-03
98	GO:0000038: very long-chain fatty acid metabolic process	8.11E-03
99	GO:0051707: response to other organism	8.47E-03
100	GO:0045037: protein import into chloroplast stroma	8.92E-03
101	GO:0010105: negative regulation of ethylene-activated signaling pathway	8.92E-03
102	GO:0000266: mitochondrial fission	8.92E-03
103	GO:2000012: regulation of auxin polar transport	9.75E-03
104	GO:0030048: actin filament-based movement	9.75E-03
105	GO:0010167: response to nitrate	1.15E-02
106	GO:0010030: positive regulation of seed germination	1.15E-02
107	GO:0070588: calcium ion transmembrane transport	1.15E-02
108	GO:0009833: plant-type primary cell wall biogenesis	1.24E-02
109	GO:0035556: intracellular signal transduction	1.29E-02
110	GO:0009863: salicylic acid mediated signaling pathway	1.34E-02
111	GO:0030150: protein import into mitochondrial matrix	1.34E-02
112	GO:0010187: negative regulation of seed germination	1.34E-02
113	GO:2000377: regulation of reactive oxygen species metabolic process	1.34E-02
114	GO:0051321: meiotic cell cycle	1.53E-02
115	GO:0009269: response to desiccation	1.53E-02
116	GO:0042545: cell wall modification	1.58E-02
117	GO:0009624: response to nematode	1.63E-02
118	GO:0080092: regulation of pollen tube growth	1.64E-02
119	GO:0018105: peptidyl-serine phosphorylation	1.68E-02
120	GO:0055085: transmembrane transport	1.70E-02
121	GO:0009686: gibberellin biosynthetic process	1.74E-02
122	GO:0048443: stamen development	1.85E-02
123	GO:0010584: pollen exine formation	1.85E-02
124	GO:0000398: mRNA splicing, via spliceosome	1.89E-02
125	GO:0070417: cellular response to cold	1.95E-02
126	GO:0008284: positive regulation of cell proliferation	1.95E-02
127	GO:0042335: cuticle development	2.07E-02
128	GO:0009960: endosperm development	2.18E-02
129	GO:0045489: pectin biosynthetic process	2.18E-02
130	GO:0009958: positive gravitropism	2.18E-02
131	GO:0010268: brassinosteroid homeostasis	2.18E-02
132	GO:0009753: response to jasmonic acid	2.25E-02
133	GO:0006814: sodium ion transport	2.29E-02
134	GO:0009790: embryo development	2.39E-02
135	GO:0010183: pollen tube guidance	2.41E-02
136	GO:0009749: response to glucose	2.41E-02
137	GO:0008654: phospholipid biosynthetic process	2.41E-02
138	GO:0010193: response to ozone	2.53E-02
139	GO:0000302: response to reactive oxygen species	2.53E-02
140	GO:0016132: brassinosteroid biosynthetic process	2.53E-02
141	GO:0016125: sterol metabolic process	2.90E-02
142	GO:0010286: heat acclimation	3.03E-02
143	GO:0009739: response to gibberellin	3.16E-02
144	GO:0009911: positive regulation of flower development	3.29E-02
145	GO:0010027: thylakoid membrane organization	3.29E-02
146	GO:0071555: cell wall organization	3.38E-02
147	GO:0010029: regulation of seed germination	3.42E-02
148	GO:0009627: systemic acquired resistance	3.56E-02
149	GO:0048767: root hair elongation	4.12E-02
150	GO:0048527: lateral root development	4.41E-02
151	GO:0006970: response to osmotic stress	4.69E-02
152	GO:0009867: jasmonic acid mediated signaling pathway	4.70E-02
153	GO:0045087: innate immune response	4.70E-02
154	GO:0016051: carbohydrate biosynthetic process	4.70E-02
155	GO:0009637: response to blue light	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0017048: Rho GTPase binding	0.00E+00
2	GO:0008419: RNA lariat debranching enzyme activity	0.00E+00
3	GO:0042171: lysophosphatidic acid acyltransferase activity	0.00E+00
4	GO:0016629: 12-oxophytodienoate reductase activity	3.02E-06
5	GO:0003883: CTP synthase activity	2.46E-05
6	GO:0043565: sequence-specific DNA binding	8.18E-05
7	GO:0015297: antiporter activity	1.54E-04
8	GO:0010181: FMN binding	2.37E-04
9	GO:0090440: abscisic acid transporter activity	2.55E-04
10	GO:0004348: glucosylceramidase activity	2.55E-04
11	GO:0090422: thiamine pyrophosphate transporter activity	2.55E-04
12	GO:0004105: choline-phosphate cytidylyltransferase activity	2.55E-04
13	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	4.00E-04
14	GO:0004127: cytidylate kinase activity	5.64E-04
15	GO:0015117: thiosulfate transmembrane transporter activity	5.64E-04
16	GO:0045140: inositol phosphoceramide synthase activity	5.64E-04
17	GO:1901677: phosphate transmembrane transporter activity	5.64E-04
18	GO:0017022: myosin binding	5.64E-04
19	GO:0004103: choline kinase activity	5.64E-04
20	GO:0003958: NADPH-hemoprotein reductase activity	5.64E-04
21	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	5.64E-04
22	GO:0003700: transcription factor activity, sequence-specific DNA binding	6.95E-04
23	GO:0008083: growth factor activity	8.30E-04
24	GO:0015141: succinate transmembrane transporter activity	9.15E-04
25	GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity	9.15E-04
26	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	9.15E-04
27	GO:0046423: allene-oxide cyclase activity	9.15E-04
28	GO:0004383: guanylate cyclase activity	9.15E-04
29	GO:0005457: GDP-fucose transmembrane transporter activity	9.15E-04
30	GO:0047325: inositol tetrakisphosphate 1-kinase activity	9.15E-04
31	GO:0005310: dicarboxylic acid transmembrane transporter activity	9.15E-04
32	GO:0009041: uridylate kinase activity	1.31E-03
33	GO:0005432: calcium:sodium antiporter activity	1.31E-03
34	GO:0015131: oxaloacetate transmembrane transporter activity	1.31E-03
35	GO:0035250: UDP-galactosyltransferase activity	1.31E-03
36	GO:0005460: UDP-glucose transmembrane transporter activity	1.31E-03
37	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	1.31E-03
38	GO:0019201: nucleotide kinase activity	1.31E-03
39	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.31E-03
40	GO:0001653: peptide receptor activity	1.31E-03
41	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	1.75E-03
42	GO:0080122: AMP transmembrane transporter activity	2.23E-03
43	GO:0004623: phospholipase A2 activity	2.23E-03
44	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.23E-03
45	GO:0010294: abscisic acid glucosyltransferase activity	2.23E-03
46	GO:0009922: fatty acid elongase activity	2.23E-03
47	GO:0005459: UDP-galactose transmembrane transporter activity	2.23E-03
48	GO:0044212: transcription regulatory region DNA binding	3.25E-03
49	GO:0005347: ATP transmembrane transporter activity	3.30E-03
50	GO:0015217: ADP transmembrane transporter activity	3.30E-03
51	GO:0015140: malate transmembrane transporter activity	3.89E-03
52	GO:0004143: diacylglycerol kinase activity	3.89E-03
53	GO:0016621: cinnamoyl-CoA reductase activity	3.89E-03
54	GO:0015491: cation:cation antiporter activity	4.52E-03
55	GO:0015288: porin activity	4.52E-03
56	GO:0016301: kinase activity	5.11E-03
57	GO:0008308: voltage-gated anion channel activity	5.18E-03
58	GO:0003951: NAD+ kinase activity	5.18E-03
59	GO:0000989: transcription factor activity, transcription factor binding	5.86E-03
60	GO:0015116: sulfate transmembrane transporter activity	8.92E-03
61	GO:0015266: protein channel activity	9.75E-03
62	GO:0005262: calcium channel activity	9.75E-03
63	GO:0015114: phosphate ion transmembrane transporter activity	9.75E-03
64	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.06E-02
65	GO:0003774: motor activity	1.06E-02
66	GO:0017025: TBP-class protein binding	1.15E-02
67	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.24E-02
68	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.24E-02
69	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.24E-02
70	GO:0045330: aspartyl esterase activity	1.27E-02
71	GO:0004857: enzyme inhibitor activity	1.34E-02
72	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.49E-02
73	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.49E-02
74	GO:0004707: MAP kinase activity	1.53E-02
75	GO:0030599: pectinesterase activity	1.54E-02
76	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.64E-02
77	GO:0030570: pectate lyase activity	1.74E-02
78	GO:0046910: pectinesterase inhibitor activity	2.64E-02
79	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.64E-02
80	GO:0004674: protein serine/threonine kinase activity	2.90E-02
81	GO:0008194: UDP-glycosyltransferase activity	3.16E-02
82	GO:0016757: transferase activity, transferring glycosyl groups	3.42E-02
83	GO:0004806: triglyceride lipase activity	3.70E-02
84	GO:0004004: ATP-dependent RNA helicase activity	3.70E-02
85	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.83E-02
86	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.97E-02
87	GO:0015238: drug transmembrane transporter activity	4.12E-02
88	GO:0005096: GTPase activator activity	4.12E-02
89	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	4.26E-02
90	GO:0005524: ATP binding	4.42E-02

Rank	GO Term	Adjusted P value
1	GO:0034426: etioplast membrane	0.00E+00
2	GO:0070382: exocytic vesicle	2.55E-04
3	GO:0031357: integral component of chloroplast inner membrane	5.64E-04
4	GO:0030133: transport vesicle	5.64E-04
5	GO:0045177: apical part of cell	1.31E-03
6	GO:0009527: plastid outer membrane	1.75E-03
7	GO:0005743: mitochondrial inner membrane	4.45E-03
8	GO:0031305: integral component of mitochondrial inner membrane	4.52E-03
9	GO:0046930: pore complex	5.18E-03
10	GO:0016604: nuclear body	6.58E-03
11	GO:0005622: intracellular	8.59E-03
12	GO:0005938: cell cortex	9.75E-03
13	GO:0016607: nuclear speck	1.40E-02
14	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.85E-02
15	GO:0005770: late endosome	2.18E-02
16	GO:0031225: anchored component of membrane	2.31E-02
17	GO:0046658: anchored component of plasma membrane	3.74E-02
18	GO:0009707: chloroplast outer membrane	3.97E-02
19	GO:0005737: cytoplasm	4.58E-02