Gene: AT1G04680
Gene description
TAIR ID: AT1G04680
Short description: Pectin lyase-like superfamily protein
Pathogen responsiveness: 0.18
General responsiveness: -0.19
Orthologous
Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene
GO biological process
pectin catabolic process
GO cellular component
extracellular region, membrane
GO molecular function
pectate lyase activity, metal ion binding, lyase activity
Metabolic pathway
Not involved in metabolic pathway
click to view PPI networkCoexpression network
Differentially expressed condition 
22 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE12856 | Col, WT, control | Col, WT, Bg h | -1.51 | 5.38E-05 |
| GSE12856 | Col, ataf1, control | Col, ataf1, Bg h | -1.62 | 2.33E-05 |
| GSE17464 | Laer, control | Laer, Flg22 2 h | -2.33 | 4.15E-05 |
| GSE17464 | Penta, control | Penta, PstDC3000 12 h | 1.97 | 3.63E-04 |
| GSE17500 | Col, 35S:AFB1, control 0 h | Col, 35S:AFB1, PstDC3000 24 h | -2.08 | 5.18E-05 |
| GSE17500 | Col, WT, control 0 h | Col, WT, PstDC3000 24 h | -2.57 | 4.42E-06 |
| GSE17500 | Col, miR393, control 0 h | Col, miR393, PstDC3000 24 h | -2.26 | 2.19E-05 |
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | -5.72 | 2.34E-11 |
| GSE21920 | Col, WT, mock | Col, WT, Pto HopZ1a C216aA 6 h | -1.51 | 2.05E-03 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 AvrRpt2 | -1.80 | 4.31E-06 |
| GSE50526 | Col, WT, mock 24 h | Col, WT, A. brassicicola 24 h | -4.12 | 3.67E-04 |
| GSE5520 | Col, WT, control 24 h | Col, WT, PstDC3000 24 h | -2.43 | 3.34E-02 |
| GSE5520 | Col, WT, control 7 h | Col, WT, PstDC3000 7 h | -3.06 | 4.49E-04 |
| GSE56094 | Col, WT, control 10 h | Col, WT, PstDC3000 10 h | -2.03 | 8.10E-08 |
| GSE56094 | Col, WT, control 13 h | Col, WT, PstDC3000 13 h | -1.88 | 6.11E-07 |
| GSE56094 | Col, WT, control 9 h | Col, WT, PstDC3000 9 h | -1.76 | 5.02E-06 |
| GSE5615 | Col, WT, water 4 h | Col, WT, HrpZ 4 h | -1.50 | 6.62E-06 |
| GSE5616 | Col, WT, water 12 h | Col, WT, P. infestans 12 h | -1.76 | 4.57E-06 |
| GSE5616 | Col, WT, water 24 h | Col, WT, P. infestans 24 h | -1.61 | 1.41E-05 |
| GSE6176 | Col, WT, control 12 h | Col, WT, PstDC3000 12 h | -1.75 | 1.07E-03 |
| GSE6556 | Col, WT, control | Col, WT, PstDC3000 AvrRpt2 48 h | -1.67 | 3.20E-02 |
| GSE6556 | Col, gh3.5, control | Col, gh3.5, PstDC3000 AvrRpt2 48 h | -1.68 | 1.02E-02 |
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