co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G04680

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010394: homogalacturonan metabolic process	0.00E+00
2	GO:1905499: trichome papilla formation	0.00E+00
3	GO:0006437: tyrosyl-tRNA aminoacylation	0.00E+00
4	GO:0080094: response to trehalose-6-phosphate	0.00E+00
5	GO:0006633: fatty acid biosynthetic process	5.41E-08
6	GO:0006065: UDP-glucuronate biosynthetic process	9.92E-07
7	GO:0006085: acetyl-CoA biosynthetic process	4.57E-06
8	GO:0045489: pectin biosynthetic process	1.31E-05
9	GO:0010411: xyloglucan metabolic process	4.41E-05
10	GO:0071555: cell wall organization	6.33E-05
11	GO:0006169: adenosine salvage	6.74E-05
12	GO:0010442: guard cell morphogenesis	6.74E-05
13	GO:0042547: cell wall modification involved in multidimensional cell growth	6.74E-05
14	GO:0045488: pectin metabolic process	6.74E-05
15	GO:0019510: S-adenosylhomocysteine catabolic process	6.74E-05
16	GO:0042546: cell wall biogenesis	1.15E-04
17	GO:0033353: S-adenosylmethionine cycle	1.62E-04
18	GO:0071258: cellular response to gravity	1.62E-04
19	GO:0043039: tRNA aminoacylation	1.62E-04
20	GO:0052541: plant-type cell wall cellulose metabolic process	1.62E-04
21	GO:0010025: wax biosynthetic process	1.68E-04
22	GO:0007017: microtubule-based process	2.09E-04
23	GO:0006730: one-carbon metabolic process	2.53E-04
24	GO:0045793: positive regulation of cell size	2.75E-04
25	GO:0015840: urea transport	2.75E-04
26	GO:0000271: polysaccharide biosynthetic process	3.54E-04
27	GO:0080170: hydrogen peroxide transmembrane transport	3.98E-04
28	GO:0043481: anthocyanin accumulation in tissues in response to UV light	3.98E-04
29	GO:0010583: response to cyclopentenone	5.01E-04
30	GO:0044209: AMP salvage	6.73E-04
31	GO:0006665: sphingolipid metabolic process	6.73E-04
32	GO:0048359: mucilage metabolic process involved in seed coat development	6.73E-04
33	GO:0006555: methionine metabolic process	8.23E-04
34	GO:0009826: unidimensional cell growth	8.97E-04
35	GO:0009612: response to mechanical stimulus	9.79E-04
36	GO:0006694: steroid biosynthetic process	9.79E-04
37	GO:0016051: carbohydrate biosynthetic process	1.08E-03
38	GO:0009645: response to low light intensity stimulus	1.14E-03
39	GO:0045995: regulation of embryonic development	1.14E-03
40	GO:0006631: fatty acid metabolic process	1.28E-03
41	GO:0009808: lignin metabolic process	1.50E-03
42	GO:0009932: cell tip growth	1.50E-03
43	GO:0048589: developmental growth	1.69E-03
44	GO:0015780: nucleotide-sugar transport	1.69E-03
45	GO:0042761: very long-chain fatty acid biosynthetic process	1.89E-03
46	GO:0035999: tetrahydrofolate interconversion	1.89E-03
47	GO:0006629: lipid metabolic process	1.99E-03
48	GO:0006949: syncytium formation	2.10E-03
49	GO:0018119: peptidyl-cysteine S-nitrosylation	2.31E-03
50	GO:0050826: response to freezing	2.76E-03
51	GO:0010020: chloroplast fission	2.99E-03
52	GO:0006071: glycerol metabolic process	3.48E-03
53	GO:0006833: water transport	3.48E-03
54	GO:0007010: cytoskeleton organization	3.73E-03
55	GO:0055114: oxidation-reduction process	3.99E-03
56	GO:0006418: tRNA aminoacylation for protein translation	3.99E-03
57	GO:0010026: trichome differentiation	3.99E-03
58	GO:0045490: pectin catabolic process	4.48E-03
59	GO:0009814: defense response, incompatible interaction	4.53E-03
60	GO:0030245: cellulose catabolic process	4.53E-03
61	GO:0040007: growth	4.81E-03
62	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	4.81E-03
63	GO:0010091: trichome branching	5.09E-03
64	GO:0019722: calcium-mediated signaling	5.09E-03
65	GO:0016117: carotenoid biosynthetic process	5.38E-03
66	GO:0034220: ion transmembrane transport	5.68E-03
67	GO:0042335: cuticle development	5.68E-03
68	GO:0019252: starch biosynthetic process	6.60E-03
69	GO:0016132: brassinosteroid biosynthetic process	6.91E-03
70	GO:0071554: cell wall organization or biogenesis	6.91E-03
71	GO:0016032: viral process	7.24E-03
72	GO:0009828: plant-type cell wall loosening	7.90E-03
73	GO:0007267: cell-cell signaling	8.24E-03
74	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	8.87E-03
75	GO:0009911: positive regulation of flower development	8.93E-03
76	GO:0015995: chlorophyll biosynthetic process	1.00E-02
77	GO:0009817: defense response to fungus, incompatible interaction	1.08E-02
78	GO:0048767: root hair elongation	1.11E-02
79	GO:0009813: flavonoid biosynthetic process	1.11E-02
80	GO:0009834: plant-type secondary cell wall biogenesis	1.15E-02
81	GO:0007568: aging	1.19E-02
82	GO:0051707: response to other organism	1.52E-02
83	GO:0008643: carbohydrate transport	1.61E-02
84	GO:0005975: carbohydrate metabolic process	1.71E-02
85	GO:0009664: plant-type cell wall organization	1.79E-02
86	GO:0048367: shoot system development	2.17E-02
87	GO:0009740: gibberellic acid mediated signaling pathway	2.31E-02
88	GO:0042545: cell wall modification	2.37E-02
89	GO:0009790: embryo development	3.17E-02

Rank	GO Term	Adjusted P value
1	GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity	0.00E+00
2	GO:0050614: delta24-sterol reductase activity	0.00E+00
3	GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity	0.00E+00
4	GO:0016631: enoyl-[acyl-carrier-protein] reductase activity	0.00E+00
5	GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity	0.00E+00
6	GO:0003979: UDP-glucose 6-dehydrogenase activity	9.92E-07
7	GO:0003878: ATP citrate synthase activity	2.38E-06
8	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.87E-05
9	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.08E-05
10	GO:0005200: structural constituent of cytoskeleton	2.82E-05
11	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.41E-05
12	GO:0009374: biotin binding	6.74E-05
13	GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity	6.74E-05
14	GO:0004013: adenosylhomocysteinase activity	6.74E-05
15	GO:0004831: tyrosine-tRNA ligase activity	6.74E-05
16	GO:0004001: adenosine kinase activity	6.74E-05
17	GO:0051287: NAD binding	1.43E-04
18	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	1.62E-04
19	GO:0004312: fatty acid synthase activity	1.62E-04
20	GO:0005507: copper ion binding	2.15E-04
21	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.53E-04
22	GO:0005504: fatty acid binding	2.75E-04
23	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	2.75E-04
24	GO:0004148: dihydrolipoyl dehydrogenase activity	2.75E-04
25	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	3.98E-04
26	GO:0045430: chalcone isomerase activity	5.32E-04
27	GO:0015204: urea transmembrane transporter activity	5.32E-04
28	GO:0016722: oxidoreductase activity, oxidizing metal ions	6.01E-04
29	GO:0003989: acetyl-CoA carboxylase activity	6.73E-04
30	GO:0009922: fatty acid elongase activity	6.73E-04
31	GO:0051920: peroxiredoxin activity	9.79E-04
32	GO:0102391: decanoate--CoA ligase activity	9.79E-04
33	GO:0004467: long-chain fatty acid-CoA ligase activity	1.14E-03
34	GO:0102425: myricetin 3-O-glucosyltransferase activity	1.14E-03
35	GO:0102360: daphnetin 3-O-glucosyltransferase activity	1.14E-03
36	GO:0047893: flavonol 3-O-glucosyltransferase activity	1.32E-03
37	GO:0016209: antioxidant activity	1.32E-03
38	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	1.69E-03
39	GO:0008889: glycerophosphodiester phosphodiesterase activity	1.69E-03
40	GO:0045735: nutrient reservoir activity	2.18E-03
41	GO:0004650: polygalacturonase activity	2.39E-03
42	GO:0016758: transferase activity, transferring hexosyl groups	3.17E-03
43	GO:0016829: lyase activity	3.52E-03
44	GO:0030570: pectate lyase activity	4.81E-03
45	GO:0008810: cellulase activity	4.81E-03
46	GO:0008514: organic anion transmembrane transporter activity	5.09E-03
47	GO:0004812: aminoacyl-tRNA ligase activity	5.38E-03
48	GO:0016413: O-acetyltransferase activity	8.59E-03
49	GO:0015250: water channel activity	8.93E-03
50	GO:0030145: manganese ion binding	1.19E-02
51	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.19E-02
52	GO:0045330: aspartyl esterase activity	2.02E-02
53	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.17E-02
54	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.26E-02
55	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.26E-02
56	GO:0030599: pectinesterase activity	2.31E-02
57	GO:0005516: calmodulin binding	3.39E-02
58	GO:0008194: UDP-glycosyltransferase activity	3.86E-02
59	GO:0016757: transferase activity, transferring glycosyl groups	4.66E-02
60	GO:0004601: peroxidase activity	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0005835: fatty acid synthase complex	0.00E+00
2	GO:0031225: anchored component of membrane	7.01E-13
3	GO:0046658: anchored component of plasma membrane	2.96E-12
4	GO:0005618: cell wall	6.11E-10
5	GO:0048046: apoplast	5.00E-09
6	GO:0009505: plant-type cell wall	7.83E-08
7	GO:0009346: citrate lyase complex	2.38E-06
8	GO:0005886: plasma membrane	3.14E-05
9	GO:0045298: tubulin complex	4.89E-05
10	GO:0009923: fatty acid elongase complex	6.74E-05
11	GO:0016020: membrane	1.33E-04
12	GO:0009570: chloroplast stroma	2.58E-04
13	GO:0009317: acetyl-CoA carboxylase complex	2.75E-04
14	GO:0005576: extracellular region	4.42E-04
15	GO:0009506: plasmodesma	4.56E-04
16	GO:0009941: chloroplast envelope	4.62E-04
17	GO:0042807: central vacuole	1.14E-03
18	GO:0000326: protein storage vacuole	1.50E-03
19	GO:0009536: plastid	2.85E-03
20	GO:0000139: Golgi membrane	3.31E-03
21	GO:0005875: microtubule associated complex	3.48E-03
22	GO:0005829: cytosol	3.60E-03
23	GO:0005774: vacuolar membrane	3.68E-03
24	GO:0009579: thylakoid	5.16E-03
25	GO:0009507: chloroplast	1.14E-02
26	GO:0005856: cytoskeleton	1.65E-02
27	GO:0005794: Golgi apparatus	2.34E-02
28	GO:0009705: plant-type vacuole membrane	3.57E-02
29	GO:0005802: trans-Golgi network	3.61E-02
30	GO:0005768: endosome	4.10E-02