Gene: AT1G02340

Gene description

TAIR ID: AT1G02340

Short description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Pathogen responsiveness: -0.40

General responsiveness: 0.24


Rice: No orthologous gene
Maize: No orthologous gene

TAAFFX.629.2.S1_AT  TAAFFX.629.2.S1_S_AT  

GO biological process

regulation of transcription, DNA-templated, signal transduction, response to light intensity, response to far red light, blue light signaling pathway, transcription, abscisic acid-activated signaling pathway, red, far-red light phototransduction

GO cellular component

nucleus, cytosol

GO molecular function

protein binding, transcription factor activity, sequence-specific DNA binding, DNA binding, protein dimerization activity, transcription cofactor activity

Protein domain

PfamPF00010, Helix-loop-helix DNA-binding domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

AT5G13790, AT2G20180, AT4G16780, AT5G61850, AT2G43010, AT1G26945, AT2G46970

AT5G13930, AT1G29910, AT4G16780

Protein-protein interaction network

The number of partners (degree) is: 19 (Top10%)

click to view PPI network

Differentially expressed condition

15 conditions

SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, PstDC3000 12 h2.224.97E-04
GSE17464Penta, controlPenta, Flg22 2 h-1.892.43E-03
GSE17464Penta, controlPenta, Flg22 2 h-1.872.26E-03
GSE18329Col, wrky72_1, controlCol, wrky72_1, Hpa noco2 96 h-1.955.55E-11
GSE18329Col, wrky72_1, controlCol, wrky72_2, Hpa noco2 96 h-1.984.47E-11
GSE26679Col, WT, GC 0 hCol, WT, GC 96 h1.741.33E-03
GSE26679Col, edr1, GC 0 hCol, edr1, GC 96 h3.091.14E-06
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.741.76E-02
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-1.882.55E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-1.608.77E-03
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.501.12E-08
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.511.96E-07
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-2.098.80E-03
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.865.25E-04
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h-2.716.43E-06

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