gene detail

Gene description

TAIR ID: AT2G46970

Short description: phytochrome interacting factor 3-like 1

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

shade avoidance, regulation of transcription, DNA-templated, red or far-red light signaling pathway, transcription

GO cellular component

nucleus

GO molecular function

transcription factor activity, sequence-specific DNA binding, protein binding, DNA binding, protein dimerization activity

Protein domain

Pfam	PF00010, Helix-loop-helix DNA-binding domain
SMART	SM00353, HLH

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT2G20180, AT2G43010

Protein-protein interaction network

The number of partners (degree) is: 3

Coexpression network

No coexpression gene

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.51	1.92E-03
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	-2.17	8.31E-04
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-2.37	3.17E-04