Gene: AT5G65280
     


Gene description


TAIR ID: AT5G65280

Short description: GCR2-like 1

Pathogen responsiveness: 0.17

General responsiveness: 0.56

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


signal transduction


GO cellular component


cytoplasm, extrinsic component of membrane, plasma membrane


GO molecular function


catalytic activity


Protein domain


PfamPF05147, Lanthionine synthetase C-like protein
SMARTSM01260, LANC_like

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260, AT2G20180, AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 20 (Top10%)

click to view PPI network

Differentially expressed condition


29 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h-1.744.08E-03
GSE17464Penta, controlPenta, Flg22 2 h-1.613.53E-03
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h2.039.66E-06
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h2.112.81E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h1.811.77E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h1.772.10E-07
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h1.613.09E-04
GSE21920Col, WT, mockCol, WT, Pto HopZ1a C216aA 6 h1.727.73E-04
GSE21920Col, WT, mockCol, WT, Pto 6 h1.615.54E-03
GSE21920Col, ulp1, mockCol, ulp1, Pto 6 h2.022.11E-04
GSE37269Di2, WT, controlDi2, WT, TEV 21 d-2.191.13E-03
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.761.07E-05
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d-2.007.67E-04
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.871.10E-03
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-2.151.14E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 EV1.553.50E-02
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV2.131.01E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.036.96E-07
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.959.20E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.058.33E-09
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h2.176.47E-04
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h1.531.58E-03
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h3.603.11E-08
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h3.911.28E-10
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h2.024.74E-08
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h2.243.29E-09
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h1.614.36E-05
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h1.748.86E-06
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h1.821.31E-06






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.