gene detail

Gene description

TAIR ID: AT5G64330

Short description: Phototropic-responsive NPH3 family protein

Pathogen responsiveness: 0.47

General responsiveness: -0.74

Orthologous

Rice:

OS02G0568200 OS05G0178000

Maize:

GRMZM2G105400

Wheat: No orthologous gene

GO biological process

protein ubiquitination, blue light signaling pathway, response to light stimulus, signal transduction, phototropism

GO cellular component

nucleus, plasma membrane

GO molecular function

protein binding, signal transducer activity

Protein domain

Pfam	PF03000, NPH3 family

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 6

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

31 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, mpk6 ko, water 4 h	Col, mpk6 ko, Flg22 4 h	-1.59	4.68E-03
GSE13739	Col, WT, control 7 d	Col, WT, G.orontii 7 d	-2.28	3.65E-14
GSE13739	Col, eds, control 7 d	Col, eds, G.orontii 7 d	-2.09	1.18E-12
GSE17464	Laer, control	Laer, Flg22 1 h	-1.77	1.18E-04
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-2.43	2.21E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-2.41	1.07E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-2.57	1.18E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.54	9.47E-11
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-3.23	3.15E-05
GSE37269	Ler0, WT, control	Ler0, WT, TEV 21 d	-2.00	1.05E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.11	3.00E-03
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-1.76	5.06E-04
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-2.39	2.44E-05
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-1.55	1.63E-03
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 EV	-1.84	9.15E-04
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.94	4.47E-13
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.80	1.57E-09
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-2.70	2.11E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-3.05	2.93E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-2.75	1.60E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-3.00	3.00E-13
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-2.11	8.34E-11
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-2.07	1.35E-10
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-3.08	1.14E-13
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	-1.53	1.30E-08
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.03	7.39E-04
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	-2.34	4.19E-04
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.62	2.50E-06
GSE5520	Col, WT, control 7 h	Col, WT, hrpA- 10 h	-1.55	2.32E-02
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-3.18	9.86E-04
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 90-105 min	-1.83	1.81E-02