co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G64330

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070125: mitochondrial translational elongation	0.00E+00
2	GO:0061157: mRNA destabilization	0.00E+00
3	GO:0019323: pentose catabolic process	0.00E+00
4	GO:0010422: regulation of brassinosteroid biosynthetic process	0.00E+00
5	GO:0007638: mechanosensory behavior	0.00E+00
6	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
7	GO:0009733: response to auxin	9.75E-11
8	GO:0009734: auxin-activated signaling pathway	2.87E-10
9	GO:0040008: regulation of growth	3.09E-07
10	GO:0046620: regulation of organ growth	5.22E-07
11	GO:1900865: chloroplast RNA modification	7.51E-05
12	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.50E-04
13	GO:0016554: cytidine to uridine editing	3.14E-04
14	GO:0030488: tRNA methylation	4.19E-04
15	GO:0044262: cellular carbohydrate metabolic process	5.15E-04
16	GO:0010480: microsporocyte differentiation	5.15E-04
17	GO:0042759: long-chain fatty acid biosynthetic process	5.15E-04
18	GO:1902458: positive regulation of stomatal opening	5.15E-04
19	GO:0015904: tetracycline transport	5.15E-04
20	GO:0000025: maltose catabolic process	5.15E-04
21	GO:0030198: extracellular matrix organization	5.15E-04
22	GO:0046520: sphingoid biosynthetic process	5.15E-04
23	GO:0070509: calcium ion import	5.15E-04
24	GO:2000070: regulation of response to water deprivation	6.69E-04
25	GO:0009926: auxin polar transport	8.04E-04
26	GO:0061062: regulation of nematode larval development	1.11E-03
27	GO:0080009: mRNA methylation	1.11E-03
28	GO:0009786: regulation of asymmetric cell division	1.11E-03
29	GO:0031648: protein destabilization	1.11E-03
30	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.11E-03
31	GO:2000123: positive regulation of stomatal complex development	1.11E-03
32	GO:0019388: galactose catabolic process	1.11E-03
33	GO:1900871: chloroplast mRNA modification	1.11E-03
34	GO:0010583: response to cyclopentenone	1.16E-03
35	GO:0048829: root cap development	1.34E-03
36	GO:0009641: shade avoidance	1.34E-03
37	GO:0009828: plant-type cell wall loosening	1.37E-03
38	GO:0080055: low-affinity nitrate transport	1.81E-03
39	GO:0090506: axillary shoot meristem initiation	1.81E-03
40	GO:0033591: response to L-ascorbic acid	1.81E-03
41	GO:1902448: positive regulation of shade avoidance	1.81E-03
42	GO:0016042: lipid catabolic process	1.95E-03
43	GO:0010628: positive regulation of gene expression	2.01E-03
44	GO:0006006: glucose metabolic process	2.01E-03
45	GO:0010588: cotyledon vascular tissue pattern formation	2.01E-03
46	GO:2000012: regulation of auxin polar transport	2.01E-03
47	GO:0010102: lateral root morphogenesis	2.01E-03
48	GO:0010020: chloroplast fission	2.27E-03
49	GO:0070588: calcium ion transmembrane transport	2.55E-03
50	GO:0009590: detection of gravity	2.63E-03
51	GO:0007231: osmosensory signaling pathway	2.63E-03
52	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	2.63E-03
53	GO:0009052: pentose-phosphate shunt, non-oxidative branch	2.63E-03
54	GO:0007275: multicellular organism development	2.69E-03
55	GO:0005975: carbohydrate metabolic process	3.50E-03
56	GO:0009755: hormone-mediated signaling pathway	3.54E-03
57	GO:0009765: photosynthesis, light harvesting	3.54E-03
58	GO:0033500: carbohydrate homeostasis	3.54E-03
59	GO:2000038: regulation of stomatal complex development	3.54E-03
60	GO:0045038: protein import into chloroplast thylakoid membrane	4.54E-03
61	GO:0048497: maintenance of floral organ identity	4.54E-03
62	GO:0016123: xanthophyll biosynthetic process	4.54E-03
63	GO:0010438: cellular response to sulfur starvation	4.54E-03
64	GO:0010375: stomatal complex patterning	4.54E-03
65	GO:0016120: carotene biosynthetic process	4.54E-03
66	GO:0016131: brassinosteroid metabolic process	4.54E-03
67	GO:0045487: gibberellin catabolic process	4.54E-03
68	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	4.58E-03
69	GO:0010405: arabinogalactan protein metabolic process	5.63E-03
70	GO:0009913: epidermal cell differentiation	5.63E-03
71	GO:0018258: protein O-linked glycosylation via hydroxyproline	5.63E-03
72	GO:1902456: regulation of stomatal opening	5.63E-03
73	GO:0009664: plant-type cell wall organization	6.03E-03
74	GO:0010182: sugar mediated signaling pathway	6.31E-03
75	GO:0080086: stamen filament development	6.79E-03
76	GO:0031930: mitochondria-nucleus signaling pathway	6.79E-03
77	GO:0006351: transcription, DNA-templated	7.43E-03
78	GO:0071554: cell wall organization or biogenesis	7.80E-03
79	GO:0010444: guard mother cell differentiation	8.04E-03
80	GO:0030307: positive regulation of cell growth	8.04E-03
81	GO:0015693: magnesium ion transport	8.04E-03
82	GO:0048528: post-embryonic root development	8.04E-03
83	GO:0030497: fatty acid elongation	8.04E-03
84	GO:0048437: floral organ development	8.04E-03
85	GO:0032502: developmental process	8.34E-03
86	GO:1901657: glycosyl compound metabolic process	8.90E-03
87	GO:0009826: unidimensional cell growth	9.20E-03
88	GO:0000105: histidine biosynthetic process	9.36E-03
89	GO:0005978: glycogen biosynthetic process	9.36E-03
90	GO:0009819: drought recovery	9.36E-03
91	GO:0006402: mRNA catabolic process	9.36E-03
92	GO:0010439: regulation of glucosinolate biosynthetic process	9.36E-03
93	GO:0009793: embryo development ending in seed dormancy	1.01E-02
94	GO:0009624: response to nematode	1.04E-02
95	GO:0006526: arginine biosynthetic process	1.08E-02
96	GO:0015996: chlorophyll catabolic process	1.08E-02
97	GO:0007186: G-protein coupled receptor signaling pathway	1.08E-02
98	GO:0009657: plastid organization	1.08E-02
99	GO:0009742: brassinosteroid mediated signaling pathway	1.12E-02
100	GO:0010027: thylakoid membrane organization	1.13E-02
101	GO:0000902: cell morphogenesis	1.22E-02
102	GO:0051865: protein autoubiquitination	1.22E-02
103	GO:0009638: phototropism	1.38E-02
104	GO:0006779: porphyrin-containing compound biosynthetic process	1.38E-02
105	GO:0006949: syncytium formation	1.54E-02
106	GO:0006782: protoporphyrinogen IX biosynthetic process	1.54E-02
107	GO:0009299: mRNA transcription	1.54E-02
108	GO:0009813: flavonoid biosynthetic process	1.56E-02
109	GO:0048229: gametophyte development	1.70E-02
110	GO:0006816: calcium ion transport	1.70E-02
111	GO:0009773: photosynthetic electron transport in photosystem I	1.70E-02
112	GO:0009682: induced systemic resistance	1.70E-02
113	GO:0008285: negative regulation of cell proliferation	1.70E-02
114	GO:0006415: translational termination	1.70E-02
115	GO:0009073: aromatic amino acid family biosynthetic process	1.70E-02
116	GO:0006865: amino acid transport	1.80E-02
117	GO:0045892: negative regulation of transcription, DNA-templated	1.81E-02
118	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.88E-02
119	GO:0012501: programmed cell death	1.88E-02
120	GO:0005983: starch catabolic process	1.88E-02
121	GO:0045037: protein import into chloroplast stroma	1.88E-02
122	GO:2000028: regulation of photoperiodism, flowering	2.05E-02
123	GO:0050826: response to freezing	2.05E-02
124	GO:0010075: regulation of meristem growth	2.05E-02
125	GO:0009725: response to hormone	2.05E-02
126	GO:0010223: secondary shoot formation	2.24E-02
127	GO:0009934: regulation of meristem structural organization	2.24E-02
128	GO:0006631: fatty acid metabolic process	2.24E-02
129	GO:0010207: photosystem II assembly	2.24E-02
130	GO:0090351: seedling development	2.43E-02
131	GO:0010030: positive regulation of seed germination	2.43E-02
132	GO:0006468: protein phosphorylation	2.54E-02
133	GO:0000162: tryptophan biosynthetic process	2.62E-02
134	GO:0010025: wax biosynthetic process	2.62E-02
135	GO:0007010: cytoskeleton organization	2.83E-02
136	GO:0003333: amino acid transmembrane transport	3.24E-02
137	GO:0048511: rhythmic process	3.24E-02
138	GO:2000022: regulation of jasmonic acid mediated signaling pathway	3.46E-02
139	GO:0009294: DNA mediated transformation	3.68E-02
140	GO:0001944: vasculature development	3.68E-02
141	GO:0009625: response to insect	3.68E-02
142	GO:0009686: gibberellin biosynthetic process	3.68E-02
143	GO:0010082: regulation of root meristem growth	3.68E-02
144	GO:0006284: base-excision repair	3.90E-02
145	GO:0016117: carotenoid biosynthetic process	4.13E-02
146	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	4.13E-02
147	GO:0009409: response to cold	4.36E-02
148	GO:0080022: primary root development	4.37E-02
149	GO:0010087: phloem or xylem histogenesis	4.37E-02
150	GO:0010118: stomatal movement	4.37E-02
151	GO:0048653: anther development	4.37E-02
152	GO:0042631: cellular response to water deprivation	4.37E-02
153	GO:0048366: leaf development	4.39E-02
154	GO:0009960: endosperm development	4.61E-02
155	GO:0010305: leaf vascular tissue pattern formation	4.61E-02
156	GO:0006520: cellular amino acid metabolic process	4.61E-02
157	GO:0006355: regulation of transcription, DNA-templated	4.79E-02
158	GO:0006396: RNA processing	4.79E-02
159	GO:0007018: microtubule-based movement	4.85E-02
160	GO:0042752: regulation of circadian rhythm	4.85E-02
161	GO:0009646: response to absence of light	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0047661: amino-acid racemase activity	0.00E+00
2	GO:0015267: channel activity	0.00E+00
3	GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	0.00E+00
4	GO:0008922: long-chain fatty acid [acyl-carrier-protein] ligase activity	0.00E+00
5	GO:0005201: extracellular matrix structural constituent	0.00E+00
6	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
7	GO:0071633: dihydroceramidase activity	0.00E+00
8	GO:0001872: (1->3)-beta-D-glucan binding	8.39E-05
9	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	5.15E-04
10	GO:0000170: sphingosine hydroxylase activity	5.15E-04
11	GO:0050139: nicotinate-N-glucosyltransferase activity	5.15E-04
12	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	5.15E-04
13	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	5.15E-04
14	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	5.15E-04
15	GO:0005227: calcium activated cation channel activity	5.15E-04
16	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	5.15E-04
17	GO:0004134: 4-alpha-glucanotransferase activity	5.15E-04
18	GO:0017118: lipoyltransferase activity	1.11E-03
19	GO:0045543: gibberellin 2-beta-dioxygenase activity	1.11E-03
20	GO:0043425: bHLH transcription factor binding	1.11E-03
21	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	1.11E-03
22	GO:0004750: ribulose-phosphate 3-epimerase activity	1.11E-03
23	GO:0008805: carbon-monoxide oxygenase activity	1.11E-03
24	GO:0042284: sphingolipid delta-4 desaturase activity	1.11E-03
25	GO:0008493: tetracycline transporter activity	1.11E-03
26	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	1.11E-03
27	GO:0004614: phosphoglucomutase activity	1.11E-03
28	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	1.81E-03
29	GO:0080054: low-affinity nitrate transmembrane transporter activity	1.81E-03
30	GO:0005504: fatty acid binding	1.81E-03
31	GO:0005262: calcium channel activity	2.01E-03
32	GO:0016149: translation release factor activity, codon specific	2.63E-03
33	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	2.63E-03
34	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	3.54E-03
35	GO:0019199: transmembrane receptor protein kinase activity	3.54E-03
36	GO:0045430: chalcone isomerase activity	3.54E-03
37	GO:0033612: receptor serine/threonine kinase binding	3.83E-03
38	GO:0052689: carboxylic ester hydrolase activity	4.36E-03
39	GO:0008725: DNA-3-methyladenine glycosylase activity	4.54E-03
40	GO:0043621: protein self-association	4.99E-03
41	GO:1990714: hydroxyproline O-galactosyltransferase activity	5.63E-03
42	GO:0004709: MAP kinase kinase kinase activity	5.63E-03
43	GO:0003723: RNA binding	6.49E-03
44	GO:0046983: protein dimerization activity	6.73E-03
45	GO:0016832: aldehyde-lyase activity	6.79E-03
46	GO:0051753: mannan synthase activity	6.79E-03
47	GO:0016298: lipase activity	6.90E-03
48	GO:0016788: hydrolase activity, acting on ester bonds	1.00E-02
49	GO:0016413: O-acetyltransferase activity	1.07E-02
50	GO:0008173: RNA methyltransferase activity	1.08E-02
51	GO:0003747: translation release factor activity	1.22E-02
52	GO:0102483: scopolin beta-glucosidase activity	1.34E-02
53	GO:0030247: polysaccharide binding	1.34E-02
54	GO:0004674: protein serine/threonine kinase activity	1.46E-02
55	GO:0004177: aminopeptidase activity	1.70E-02
56	GO:0047372: acylglycerol lipase activity	1.70E-02
57	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.72E-02
58	GO:0004871: signal transducer activity	1.90E-02
59	GO:0015095: magnesium ion transmembrane transporter activity	2.05E-02
60	GO:0031072: heat shock protein binding	2.05E-02
61	GO:0004565: beta-galactosidase activity	2.05E-02
62	GO:0003725: double-stranded RNA binding	2.05E-02
63	GO:0008422: beta-glucosidase activity	2.06E-02
64	GO:0008017: microtubule binding	2.21E-02
65	GO:0008266: poly(U) RNA binding	2.24E-02
66	GO:0004190: aspartic-type endopeptidase activity	2.43E-02
67	GO:0008146: sulfotransferase activity	2.43E-02
68	GO:0003712: transcription cofactor activity	2.43E-02
69	GO:0044212: transcription regulatory region DNA binding	2.50E-02
70	GO:0009055: electron carrier activity	2.69E-02
71	GO:0051536: iron-sulfur cluster binding	2.83E-02
72	GO:0005528: FK506 binding	2.83E-02
73	GO:0004176: ATP-dependent peptidase activity	3.24E-02
74	GO:0003964: RNA-directed DNA polymerase activity	3.24E-02
75	GO:0003777: microtubule motor activity	3.63E-02
76	GO:0015171: amino acid transmembrane transporter activity	3.63E-02
77	GO:0030570: pectate lyase activity	3.68E-02
78	GO:0003727: single-stranded RNA binding	3.90E-02
79	GO:0003756: protein disulfide isomerase activity	3.90E-02
80	GO:0004650: polygalacturonase activity	4.25E-02
81	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.50E-02
82	GO:0005199: structural constituent of cell wall	4.61E-02
83	GO:0015035: protein disulfide oxidoreductase activity	4.79E-02
84	GO:0016853: isomerase activity	4.85E-02
85	GO:0050662: coenzyme binding	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0010319: stromule	1.98E-04
2	GO:0009941: chloroplast envelope	1.99E-04
3	GO:0009507: chloroplast	3.38E-04
4	GO:0009534: chloroplast thylakoid	9.89E-04
5	GO:0031357: integral component of chloroplast inner membrane	1.11E-03
6	GO:0009528: plastid inner membrane	1.81E-03
7	GO:0019897: extrinsic component of plasma membrane	1.81E-03
8	GO:0030139: endocytic vesicle	1.81E-03
9	GO:0032585: multivesicular body membrane	2.63E-03
10	GO:0009527: plastid outer membrane	3.54E-03
11	GO:0009570: chloroplast stroma	3.63E-03
12	GO:0005886: plasma membrane	7.35E-03
13	GO:0046658: anchored component of plasma membrane	7.68E-03
14	GO:0009986: cell surface	8.04E-03
15	GO:0009501: amyloplast	9.36E-03
16	GO:0030529: intracellular ribonucleoprotein complex	1.13E-02
17	GO:0009707: chloroplast outer membrane	1.48E-02
18	GO:0090404: pollen tube tip	1.70E-02
19	GO:0005578: proteinaceous extracellular matrix	2.05E-02
20	GO:0009508: plastid chromosome	2.05E-02
21	GO:0030095: chloroplast photosystem II	2.24E-02
22	GO:0009654: photosystem II oxygen evolving complex	3.03E-02
23	GO:0009532: plastid stroma	3.24E-02
24	GO:0015629: actin cytoskeleton	3.68E-02
25	GO:0005576: extracellular region	3.96E-02
26	GO:0031225: anchored component of membrane	4.10E-02
27	GO:0005871: kinesin complex	4.13E-02
28	GO:0005874: microtubule	4.49E-02
29	GO:0009535: chloroplast thylakoid membrane	4.93E-02