Gene: AT5G63780
     

Gene description


TAIR ID: AT5G63780

Short description: RING/FYVE/PHD zinc finger superfamily protein

Pathogen responsiveness: 0.80

General responsiveness: 0.86

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


meristem development, maintenance of shoot apical meristem identity


GO cellular component


nucleus, integral component of membrane


GO molecular function


zinc ion binding


Protein domain


PfamPF12906, RING-variant domain
SMARTSM00744, RINGv

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


38 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h-1.861.52E-08
GSE12856Col, ataf1, controlCol, ataf1, Bg h-2.133.33E-09
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d-1.601.45E-10
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 1 h-1.562.22E-02
GSE17464Laer, controlLaer, Flg22 1 h-2.311.60E-04
GSE17464Laer, controlLaer, Flg22 2 h-2.232.80E-04
GSE17464Penta, controlPenta, PstDC3000 12 h-1.842.67E-03
GSE17464Penta, controlPenta, Flg22 2 h-2.768.48E-06
GSE17464Penta, controlPenta, Flg22 2 h-2.721.62E-05
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-2.589.31E-06
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-3.021.19E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-2.451.06E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-4.174.66E-09
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-2.328.05E-07
GSE21920Col, WT, mockCol, WT, Pto HopZ1a C216aA 6 h-1.653.12E-04
GSE21920Col, ulp1, mockCol, ulp1, Pto 6 h-1.584.89E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-2.102.88E-07
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV-1.572.60E-05
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.951.40E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.511.83E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.432.52E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.161.49E-08
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-3.057.85E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.285.15E-13
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h-2.563.17E-04
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h-1.626.92E-03
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.652.04E-06
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-2.011.63E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.655.83E-08
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-2.331.49E-14
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-1.525.02E-07
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.761.63E-09
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-1.814.34E-10
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h-1.713.03E-08
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.842.97E-09
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-1.966.72E-11
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.381.91E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.975.83E-07






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