GO Enrichment Analysis of Co-expressed Genes with
AT5G63780
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 2 | GO:1905177: tracheary element differentiation | 0.00E+00 |
| 3 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 4 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 5 | GO:0010412: mannan metabolic process | 0.00E+00 |
| 6 | GO:0070979: protein K11-linked ubiquitination | 0.00E+00 |
| 7 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.11E-07 |
| 8 | GO:0016123: xanthophyll biosynthetic process | 2.30E-05 |
| 9 | GO:0048564: photosystem I assembly | 8.48E-05 |
| 10 | GO:0043266: regulation of potassium ion transport | 1.30E-04 |
| 11 | GO:0043087: regulation of GTPase activity | 1.30E-04 |
| 12 | GO:2000021: regulation of ion homeostasis | 1.30E-04 |
| 13 | GO:0006436: tryptophanyl-tRNA aminoacylation | 1.30E-04 |
| 14 | GO:1902458: positive regulation of stomatal opening | 1.30E-04 |
| 15 | GO:0060359: response to ammonium ion | 2.99E-04 |
| 16 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 2.99E-04 |
| 17 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 2.99E-04 |
| 18 | GO:0010207: photosystem II assembly | 3.27E-04 |
| 19 | GO:0009658: chloroplast organization | 4.63E-04 |
| 20 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 4.92E-04 |
| 21 | GO:0031145: anaphase-promoting complex-dependent catabolic process | 4.92E-04 |
| 22 | GO:0010623: programmed cell death involved in cell development | 4.92E-04 |
| 23 | GO:0043157: response to cation stress | 4.92E-04 |
| 24 | GO:0005977: glycogen metabolic process | 4.92E-04 |
| 25 | GO:0042989: sequestering of actin monomers | 7.04E-04 |
| 26 | GO:0009226: nucleotide-sugar biosynthetic process | 7.04E-04 |
| 27 | GO:2001141: regulation of RNA biosynthetic process | 7.04E-04 |
| 28 | GO:0030071: regulation of mitotic metaphase/anaphase transition | 7.04E-04 |
| 29 | GO:0009793: embryo development ending in seed dormancy | 7.08E-04 |
| 30 | GO:0009306: protein secretion | 7.09E-04 |
| 31 | GO:0046355: mannan catabolic process | 9.34E-04 |
| 32 | GO:0010508: positive regulation of autophagy | 9.34E-04 |
| 33 | GO:0010021: amylopectin biosynthetic process | 9.34E-04 |
| 34 | GO:0051781: positive regulation of cell division | 9.34E-04 |
| 35 | GO:0051322: anaphase | 9.34E-04 |
| 36 | GO:0006661: phosphatidylinositol biosynthetic process | 9.34E-04 |
| 37 | GO:0007059: chromosome segregation | 9.50E-04 |
| 38 | GO:0032876: negative regulation of DNA endoreduplication | 1.18E-03 |
| 39 | GO:0030041: actin filament polymerization | 1.18E-03 |
| 40 | GO:0009107: lipoate biosynthetic process | 1.18E-03 |
| 41 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 1.45E-03 |
| 42 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.45E-03 |
| 43 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.45E-03 |
| 44 | GO:0009959: negative gravitropism | 1.45E-03 |
| 45 | GO:0010027: thylakoid membrane organization | 1.55E-03 |
| 46 | GO:0042372: phylloquinone biosynthetic process | 1.73E-03 |
| 47 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 2.04E-03 |
| 48 | GO:0010444: guard mother cell differentiation | 2.04E-03 |
| 49 | GO:0006400: tRNA modification | 2.04E-03 |
| 50 | GO:0051510: regulation of unidimensional cell growth | 2.04E-03 |
| 51 | GO:0009395: phospholipid catabolic process | 2.04E-03 |
| 52 | GO:0042255: ribosome assembly | 2.36E-03 |
| 53 | GO:0006353: DNA-templated transcription, termination | 2.36E-03 |
| 54 | GO:0006605: protein targeting | 2.36E-03 |
| 55 | GO:0032875: regulation of DNA endoreduplication | 2.36E-03 |
| 56 | GO:2000070: regulation of response to water deprivation | 2.36E-03 |
| 57 | GO:0045010: actin nucleation | 2.36E-03 |
| 58 | GO:0071482: cellular response to light stimulus | 2.69E-03 |
| 59 | GO:0009821: alkaloid biosynthetic process | 3.04E-03 |
| 60 | GO:0010206: photosystem II repair | 3.04E-03 |
| 61 | GO:0000373: Group II intron splicing | 3.04E-03 |
| 62 | GO:0006259: DNA metabolic process | 3.79E-03 |
| 63 | GO:0042538: hyperosmotic salinity response | 4.08E-03 |
| 64 | GO:0006265: DNA topological change | 4.18E-03 |
| 65 | GO:1903507: negative regulation of nucleic acid-templated transcription | 4.18E-03 |
| 66 | GO:0006352: DNA-templated transcription, initiation | 4.18E-03 |
| 67 | GO:0045037: protein import into chloroplast stroma | 4.58E-03 |
| 68 | GO:0030036: actin cytoskeleton organization | 5.00E-03 |
| 69 | GO:0006096: glycolytic process | 5.17E-03 |
| 70 | GO:0048316: seed development | 5.34E-03 |
| 71 | GO:0090351: seedling development | 5.88E-03 |
| 72 | GO:0006629: lipid metabolic process | 6.08E-03 |
| 73 | GO:0007010: cytoskeleton organization | 6.81E-03 |
| 74 | GO:0008299: isoprenoid biosynthetic process | 7.30E-03 |
| 75 | GO:0006418: tRNA aminoacylation for protein translation | 7.30E-03 |
| 76 | GO:0015992: proton transport | 7.79E-03 |
| 77 | GO:0010431: seed maturation | 7.79E-03 |
| 78 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 8.30E-03 |
| 79 | GO:0019722: calcium-mediated signaling | 9.35E-03 |
| 80 | GO:0042127: regulation of cell proliferation | 9.35E-03 |
| 81 | GO:0010089: xylem development | 9.35E-03 |
| 82 | GO:0016117: carotenoid biosynthetic process | 9.90E-03 |
| 83 | GO:0008033: tRNA processing | 1.04E-02 |
| 84 | GO:0010087: phloem or xylem histogenesis | 1.04E-02 |
| 85 | GO:0045489: pectin biosynthetic process | 1.10E-02 |
| 86 | GO:0048868: pollen tube development | 1.10E-02 |
| 87 | GO:0019252: starch biosynthetic process | 1.22E-02 |
| 88 | GO:0008654: phospholipid biosynthetic process | 1.22E-02 |
| 89 | GO:0010583: response to cyclopentenone | 1.34E-02 |
| 90 | GO:0016032: viral process | 1.34E-02 |
| 91 | GO:0032502: developmental process | 1.34E-02 |
| 92 | GO:0009630: gravitropism | 1.34E-02 |
| 93 | GO:0010090: trichome morphogenesis | 1.40E-02 |
| 94 | GO:0005975: carbohydrate metabolic process | 1.50E-02 |
| 95 | GO:0007267: cell-cell signaling | 1.53E-02 |
| 96 | GO:0000910: cytokinesis | 1.59E-02 |
| 97 | GO:0016126: sterol biosynthetic process | 1.66E-02 |
| 98 | GO:0016311: dephosphorylation | 1.93E-02 |
| 99 | GO:0048481: plant ovule development | 2.00E-02 |
| 100 | GO:0048527: lateral root development | 2.22E-02 |
| 101 | GO:0007568: aging | 2.22E-02 |
| 102 | GO:0009637: response to blue light | 2.37E-02 |
| 103 | GO:0006631: fatty acid metabolic process | 2.68E-02 |
| 104 | GO:0008283: cell proliferation | 2.84E-02 |
| 105 | GO:0010114: response to red light | 2.84E-02 |
| 106 | GO:0042546: cell wall biogenesis | 2.92E-02 |
| 107 | GO:0009644: response to high light intensity | 3.00E-02 |
| 108 | GO:0031347: regulation of defense response | 3.25E-02 |
| 109 | GO:0006364: rRNA processing | 3.51E-02 |
| 110 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.60E-02 |
| 111 | GO:0015031: protein transport | 4.11E-02 |
| 112 | GO:0051726: regulation of cell cycle | 4.70E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004561: alpha-N-acetylglucosaminidase activity | 0.00E+00 |
| 2 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 3 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 4 | GO:0005048: signal sequence binding | 0.00E+00 |
| 5 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 6 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 7 | GO:0043022: ribosome binding | 8.48E-05 |
| 8 | GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity | 1.30E-04 |
| 9 | GO:0004830: tryptophan-tRNA ligase activity | 1.30E-04 |
| 10 | GO:0052624: 2-phytyl-1,4-naphthoquinone methyltransferase activity | 1.30E-04 |
| 11 | GO:0048531: beta-1,3-galactosyltransferase activity | 2.99E-04 |
| 12 | GO:0019156: isoamylase activity | 2.99E-04 |
| 13 | GO:0004802: transketolase activity | 2.99E-04 |
| 14 | GO:0010291: carotene beta-ring hydroxylase activity | 2.99E-04 |
| 15 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 2.99E-04 |
| 16 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 3.27E-04 |
| 17 | GO:0016992: lipoate synthase activity | 4.92E-04 |
| 18 | GO:0070402: NADPH binding | 4.92E-04 |
| 19 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 7.04E-04 |
| 20 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 7.04E-04 |
| 21 | GO:0004300: enoyl-CoA hydratase activity | 7.04E-04 |
| 22 | GO:0016987: sigma factor activity | 9.34E-04 |
| 23 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 9.34E-04 |
| 24 | GO:0001053: plastid sigma factor activity | 9.34E-04 |
| 25 | GO:0016985: mannan endo-1,4-beta-mannosidase activity | 9.34E-04 |
| 26 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 9.34E-04 |
| 27 | GO:0008374: O-acyltransferase activity | 1.18E-03 |
| 28 | GO:0003785: actin monomer binding | 1.18E-03 |
| 29 | GO:0004556: alpha-amylase activity | 1.45E-03 |
| 30 | GO:0004427: inorganic diphosphatase activity | 2.04E-03 |
| 31 | GO:0008312: 7S RNA binding | 2.36E-03 |
| 32 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 2.69E-03 |
| 33 | GO:0030955: potassium ion binding | 3.41E-03 |
| 34 | GO:0016844: strictosidine synthase activity | 3.41E-03 |
| 35 | GO:0004743: pyruvate kinase activity | 3.41E-03 |
| 36 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 4.18E-03 |
| 37 | GO:0008081: phosphoric diester hydrolase activity | 5.00E-03 |
| 38 | GO:0005525: GTP binding | 5.84E-03 |
| 39 | GO:0005528: FK506 binding | 6.81E-03 |
| 40 | GO:0003714: transcription corepressor activity | 6.81E-03 |
| 41 | GO:0030570: pectate lyase activity | 8.82E-03 |
| 42 | GO:0003727: single-stranded RNA binding | 9.35E-03 |
| 43 | GO:0004812: aminoacyl-tRNA ligase activity | 9.90E-03 |
| 44 | GO:0016853: isomerase activity | 1.16E-02 |
| 45 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.53E-02 |
| 46 | GO:0016788: hydrolase activity, acting on ester bonds | 1.70E-02 |
| 47 | GO:0008236: serine-type peptidase activity | 1.93E-02 |
| 48 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.00E-02 |
| 49 | GO:0005096: GTPase activator activity | 2.07E-02 |
| 50 | GO:0004222: metalloendopeptidase activity | 2.15E-02 |
| 51 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.15E-02 |
| 52 | GO:0030145: manganese ion binding | 2.22E-02 |
| 53 | GO:0003993: acid phosphatase activity | 2.45E-02 |
| 54 | GO:0004871: signal transducer activity | 2.60E-02 |
| 55 | GO:0004185: serine-type carboxypeptidase activity | 2.84E-02 |
| 56 | GO:0035091: phosphatidylinositol binding | 3.00E-02 |
| 57 | GO:0003924: GTPase activity | 3.06E-02 |
| 58 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.17E-02 |
| 59 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.51E-02 |
| 60 | GO:0003690: double-stranded DNA binding | 3.60E-02 |
| 61 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 4.04E-02 |
| 62 | GO:0003779: actin binding | 4.41E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.37E-20 |
| 3 | GO:0080085: signal recognition particle, chloroplast targeting | 8.43E-07 |
| 4 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 1.07E-04 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 1.63E-04 |
| 6 | GO:0009574: preprophase band | 2.89E-04 |
| 7 | GO:0005773: vacuole | 4.54E-04 |
| 8 | GO:0033281: TAT protein transport complex | 4.92E-04 |
| 9 | GO:0009579: thylakoid | 7.93E-04 |
| 10 | GO:0009570: chloroplast stroma | 7.93E-04 |
| 11 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 9.34E-04 |
| 12 | GO:0030663: COPI-coated vesicle membrane | 9.34E-04 |
| 13 | GO:0009543: chloroplast thylakoid lumen | 1.09E-03 |
| 14 | GO:0031209: SCAR complex | 1.45E-03 |
| 15 | GO:0046658: anchored component of plasma membrane | 2.32E-03 |
| 16 | GO:0031977: thylakoid lumen | 3.00E-03 |
| 17 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.04E-03 |
| 18 | GO:0005680: anaphase-promoting complex | 3.04E-03 |
| 19 | GO:0016604: nuclear body | 3.41E-03 |
| 20 | GO:0030125: clathrin vesicle coat | 3.79E-03 |
| 21 | GO:0000311: plastid large ribosomal subunit | 4.58E-03 |
| 22 | GO:0005938: cell cortex | 5.00E-03 |
| 23 | GO:0005578: proteinaceous extracellular matrix | 5.00E-03 |
| 24 | GO:0031225: anchored component of membrane | 5.39E-03 |
| 25 | GO:0030176: integral component of endoplasmic reticulum membrane | 5.88E-03 |
| 26 | GO:0009654: photosystem II oxygen evolving complex | 7.30E-03 |
| 27 | GO:0042651: thylakoid membrane | 7.30E-03 |
| 28 | GO:0005623: cell | 8.00E-03 |
| 29 | GO:0015629: actin cytoskeleton | 8.82E-03 |
| 30 | GO:0009941: chloroplast envelope | 1.00E-02 |
| 31 | GO:0009505: plant-type cell wall | 1.13E-02 |
| 32 | GO:0019898: extrinsic component of membrane | 1.22E-02 |
| 33 | GO:0009295: nucleoid | 1.53E-02 |
| 34 | GO:0030529: intracellular ribonucleoprotein complex | 1.66E-02 |
| 35 | GO:0019005: SCF ubiquitin ligase complex | 2.00E-02 |
| 36 | GO:0031969: chloroplast membrane | 2.07E-02 |
| 37 | GO:0015934: large ribosomal subunit | 2.22E-02 |
| 38 | GO:0009506: plasmodesma | 2.97E-02 |
| 39 | GO:0000139: Golgi membrane | 4.44E-02 |
| 40 | GO:0009706: chloroplast inner membrane | 4.51E-02 |