gene detail

Gene description

TAIR ID: AT5G63530

Short description: farnesylated protein 3

Pathogen responsiveness: -0.34

General responsiveness: 0.04

Orthologous

Rice: No orthologous gene

Maize:

Wheat:

GO biological process

cellular transition metal ion homeostasis, metal ion transport

GO cellular component

cytoplasm, plasma membrane, nucleus

GO molecular function

unkown

Protein domain

Pfam	PF00403, Heavy-metal-associated domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260, AT2G20180

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

Coexpression network

Differentially expressed condition

17 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-1.68	1.90E-04
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-1.81	8.96E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.83	2.83E-11
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.01	4.11E-03
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-1.69	8.82E-05
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.97	7.25E-13
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	-1.56	8.93E-09
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-1.81	1.08E-09
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-2.17	1.58E-10
GSE56094	Col, WT, control 10 h	Col, WT, hrpA- 10 h	-1.52	1.43E-05
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	-1.62	1.24E-06
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-2.10	9.64E-10
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-2.38	6.96E-12
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	-1.56	3.87E-06
GSE56094	Col, WT, control 8 h	Col, WT, hrpA- 8 h	-1.66	2.22E-06
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.69	1.41E-03
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	-1.98	1.81E-02