Gene: AT5G62790
Gene description
TAIR ID: AT5G62790
Short description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
Pathogen responsiveness: -0.24
General responsiveness: 0.59
GO biological process
isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process, methylerythritol 4-phosphate pathway, response to cadmium ion, oxidation-reduction process, isoprenoid biosynthetic process
GO cellular component
chloroplast stroma, chloroplast
GO molecular function
NADPH binding, 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity, isomerase activity, metal ion binding, manganese ion binding
Protein domain
| Pfam | PF08436, 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal |
| Pfam | PF02670, 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
| Pfam | PF13288, DXP reductoisomerase C-terminal domain |
Metabolic pathway
NONMEVIPP-PWY: methylerythritol phosphate pathway
PWY-5121: superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP)
Protein-protein interaction network
No Interactor
Coexpression network
Differentially expressed condition 
17 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE17464 | Laer, control | Laer, Flg22 2 h | -1.59 | 3.64E-03 |
| GSE17464 | Penta, control | Penta, Flg22 2 h | -1.65 | 2.47E-03 |
| GSE17500 | Col, WT, control 0 h | Col, WT, PstDC3000 24 h | -1.69 | 1.74E-04 |
| GSE17500 | Col, miR393, control 0 h | Col, miR393, PstDC3000 24 h | -1.59 | 3.73E-04 |
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | -2.39 | 8.65E-11 |
| GSE37269 | St0, WT, control | St0, WT, TEV 21 d | -1.57 | 1.08E-02 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | -2.29 | 1.14E-13 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | -1.68 | 1.29E-11 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | -2.02 | 7.27E-13 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | -1.70 | 1.06E-11 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | -2.28 | 1.13E-13 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | -1.54 | 5.77E-10 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- 10 h | -1.69 | 1.37E-04 |
| GSE56094 | Col, WT, control 10 h | Col, WT, PstDC3000 10 h | -1.61 | 4.56E-12 |
| GSE58954 | Col, WT, Psm AvrRpt2 0 h | Col, WT, Psm AvrRpt2 6 h | -1.65 | 2.18E-03 |
| GSE9674 | Ws-4, AtMYB30 ox, control | Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h | -1.76 | 2.91E-03 |
| GSE9674 | Ws-4, WT, control | Ws-4, WT, Xanthomonas strain Xcc147 6 h | -1.96 | 1.74E-03 |
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