Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G62790

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0033614: chloroplast proton-transporting ATP synthase complex assembly0.00E+00
2GO:0090279: regulation of calcium ion import0.00E+00
3GO:0015805: S-adenosyl-L-methionine transport0.00E+00
4GO:0071474: cellular hyperosmotic response0.00E+00
5GO:0046838: phosphorylated carbohydrate dephosphorylation0.00E+00
6GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
7GO:0005983: starch catabolic process2.30E-06
8GO:0010480: microsporocyte differentiation8.43E-05
9GO:0031338: regulation of vesicle fusion8.43E-05
10GO:0000025: maltose catabolic process8.43E-05
11GO:0051262: protein tetramerization2.00E-04
12GO:0090630: activation of GTPase activity3.35E-04
13GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly4.84E-04
14GO:0015846: polyamine transport6.44E-04
15GO:0031122: cytoplasmic microtubule organization6.44E-04
16GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway6.44E-04
17GO:0010021: amylopectin biosynthetic process6.44E-04
18GO:0006552: leucine catabolic process6.44E-04
19GO:1901657: glycosyl compound metabolic process7.08E-04
20GO:0048497: maintenance of floral organ identity8.14E-04
21GO:0007094: mitotic spindle assembly checkpoint8.14E-04
22GO:0009913: epidermal cell differentiation9.94E-04
23GO:0006574: valine catabolic process9.94E-04
24GO:0010304: PSII associated light-harvesting complex II catabolic process9.94E-04
25GO:0009082: branched-chain amino acid biosynthetic process1.18E-03
26GO:0009942: longitudinal axis specification1.18E-03
27GO:0048437: floral organ development1.39E-03
28GO:0007155: cell adhesion1.60E-03
29GO:0008610: lipid biosynthetic process1.60E-03
30GO:0071482: cellular response to light stimulus1.83E-03
31GO:0015996: chlorophyll catabolic process1.83E-03
32GO:0009827: plant-type cell wall modification1.83E-03
33GO:0048507: meristem development2.06E-03
34GO:0007346: regulation of mitotic cell cycle2.30E-03
35GO:0009638: phototropism2.30E-03
36GO:0045036: protein targeting to chloroplast2.56E-03
37GO:0019538: protein metabolic process2.56E-03
38GO:1903507: negative regulation of nucleic acid-templated transcription2.82E-03
39GO:0048229: gametophyte development2.82E-03
40GO:0046856: phosphatidylinositol dephosphorylation2.82E-03
41GO:0006820: anion transport3.09E-03
42GO:0006006: glucose metabolic process3.37E-03
43GO:0010075: regulation of meristem growth3.37E-03
44GO:0010102: lateral root morphogenesis3.37E-03
45GO:0009785: blue light signaling pathway3.37E-03
46GO:0009934: regulation of meristem structural organization3.66E-03
47GO:0048768: root hair cell tip growth3.66E-03
48GO:2000022: regulation of jasmonic acid mediated signaling pathway5.55E-03
49GO:0005975: carbohydrate metabolic process6.20E-03
50GO:0010051: xylem and phloem pattern formation6.97E-03
51GO:0048653: anther development6.97E-03
52GO:0045489: pectin biosynthetic process7.34E-03
53GO:0010305: leaf vascular tissue pattern formation7.34E-03
54GO:0048825: cotyledon development8.10E-03
55GO:0019252: starch biosynthetic process8.10E-03
56GO:0009791: post-embryonic development8.10E-03
57GO:0010027: thylakoid membrane organization1.10E-02
58GO:0016126: sterol biosynthetic process1.10E-02
59GO:0009816: defense response to bacterium, incompatible interaction1.14E-02
60GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.20E-02
61GO:0046777: protein autophosphorylation1.24E-02
62GO:0030244: cellulose biosynthetic process1.33E-02
63GO:0009817: defense response to fungus, incompatible interaction1.33E-02
64GO:0009834: plant-type secondary cell wall biogenesis1.42E-02
65GO:0016042: lipid catabolic process1.66E-02
66GO:0009733: response to auxin1.70E-02
67GO:0006839: mitochondrial transport1.72E-02
68GO:0031347: regulation of defense response2.15E-02
69GO:0006812: cation transport2.21E-02
70GO:0046686: response to cadmium ion2.57E-02
71GO:0018105: peptidyl-serine phosphorylation3.05E-02
72GO:0009611: response to wounding3.10E-02
73GO:0035556: intracellular signal transduction3.20E-02
74GO:0051301: cell division3.31E-02
75GO:0009845: seed germination3.70E-02
76GO:0009790: embryo development3.91E-02
77GO:0010150: leaf senescence4.40E-02
78GO:0016310: phosphorylation4.50E-02
79GO:0010228: vegetative to reproductive phase transition of meristem4.55E-02
80GO:0009739: response to gibberellin4.77E-02
81GO:0006470: protein dephosphorylation4.84E-02
82GO:0010468: regulation of gene expression4.99E-02
RankGO TermAdjusted P value
1GO:0019808: polyamine binding0.00E+00
2GO:0102193: protein-ribulosamine 3-kinase activity0.00E+00
3GO:0005227: calcium activated cation channel activity0.00E+00
4GO:0004723: calcium-dependent protein serine/threonine phosphatase activity2.44E-05
5GO:0004856: xylulokinase activity8.43E-05
6GO:0004134: 4-alpha-glucanotransferase activity8.43E-05
7GO:0008568: microtubule-severing ATPase activity8.43E-05
8GO:0019203: carbohydrate phosphatase activity8.43E-05
9GO:0034256: chlorophyll(ide) b reductase activity8.43E-05
10GO:0004163: diphosphomevalonate decarboxylase activity8.43E-05
11GO:0030941: chloroplast targeting sequence binding8.43E-05
12GO:0050308: sugar-phosphatase activity8.43E-05
13GO:0033201: alpha-1,4-glucan synthase activity2.00E-04
14GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity2.00E-04
15GO:0004373: glycogen (starch) synthase activity3.35E-04
16GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity4.84E-04
17GO:0052656: L-isoleucine transaminase activity4.84E-04
18GO:0052654: L-leucine transaminase activity4.84E-04
19GO:0052655: L-valine transaminase activity4.84E-04
20GO:0019201: nucleotide kinase activity4.84E-04
21GO:0004445: inositol-polyphosphate 5-phosphatase activity4.84E-04
22GO:0009011: starch synthase activity6.44E-04
23GO:0051861: glycolipid binding6.44E-04
24GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor6.44E-04
25GO:0004084: branched-chain-amino-acid transaminase activity6.44E-04
26GO:0008381: mechanically-gated ion channel activity8.14E-04
27GO:0016773: phosphotransferase activity, alcohol group as acceptor8.14E-04
28GO:0017137: Rab GTPase binding8.14E-04
29GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity9.94E-04
30GO:0004556: alpha-amylase activity9.94E-04
31GO:2001070: starch binding9.94E-04
32GO:0102483: scopolin beta-glucosidase activity1.04E-03
33GO:0004017: adenylate kinase activity1.18E-03
34GO:0005261: cation channel activity1.18E-03
35GO:0008422: beta-glucosidase activity1.57E-03
36GO:0004033: aldo-keto reductase (NADP) activity1.60E-03
37GO:0008138: protein tyrosine/serine/threonine phosphatase activity2.06E-03
38GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity3.09E-03
39GO:0004565: beta-galactosidase activity3.37E-03
40GO:0003714: transcription corepressor activity4.57E-03
41GO:0033612: receptor serine/threonine kinase binding5.22E-03
42GO:0004707: MAP kinase activity5.22E-03
43GO:0042802: identical protein binding7.64E-03
44GO:0048038: quinone binding8.50E-03
45GO:0016788: hydrolase activity, acting on ester bonds9.48E-03
46GO:0016413: O-acetyltransferase activity1.06E-02
47GO:0009931: calcium-dependent protein serine/threonine kinase activity1.19E-02
48GO:0004721: phosphoprotein phosphatase activity1.23E-02
49GO:0004683: calmodulin-dependent protein kinase activity1.23E-02
50GO:0052689: carboxylic ester hydrolase activity1.28E-02
51GO:0005509: calcium ion binding1.33E-02
52GO:0005096: GTPase activator activity1.37E-02
53GO:0016301: kinase activity1.42E-02
54GO:0044212: transcription regulatory region DNA binding1.47E-02
55GO:0043621: protein self-association1.99E-02
56GO:0003777: microtubule motor activity2.50E-02
57GO:0003779: actin binding2.92E-02
58GO:0043565: sequence-specific DNA binding3.80E-02
59GO:0016787: hydrolase activity3.82E-02
60GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds4.00E-02
61GO:0030246: carbohydrate binding4.07E-02
62GO:0005516: calmodulin binding4.55E-02
63GO:0005524: ATP binding4.70E-02
64GO:0005515: protein binding4.94E-02
RankGO TermAdjusted P value
1GO:0042597: periplasmic space0.00E+00
2GO:0009501: amyloplast4.35E-05
3GO:0009507: chloroplast3.38E-04
4GO:0005828: kinetochore microtubule6.44E-04
5GO:0009535: chloroplast thylakoid membrane7.34E-04
6GO:0000776: kinetochore8.14E-04
7GO:0009941: chloroplast envelope9.09E-04
8GO:0000777: condensed chromosome kinetochore1.18E-03
9GO:0010369: chromocenter1.18E-03
10GO:0031359: integral component of chloroplast outer membrane1.39E-03
11GO:0009570: chloroplast stroma1.88E-03
12GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)2.06E-03
13GO:0005876: spindle microtubule2.30E-03
14GO:0010287: plastoglobule4.14E-03
15GO:0009534: chloroplast thylakoid7.63E-03
16GO:0009707: chloroplast outer membrane1.33E-02
17GO:0005635: nuclear envelope2.44E-02
18GO:0012505: endomembrane system2.92E-02
19GO:0005886: plasma membrane3.27E-02
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Gene type



Gene DE type