Gene: AT5G61420
     

Gene description


TAIR ID: AT5G61420

Short description: myb domain protein 28

Pathogen responsiveness: 0.53

General responsiveness: 1.03

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of glucosinolate biosynthetic process, regulation of transcription, DNA-templated, response to insect, regulation of transcription from RNA polymerase II promoter, induced systemic resistance, response to bacterium, cellular response to sulfur starvation, transcription, response to jasmonic acid, defense response to fungus, cell differentiation, response to salicylic acid, response to gibberellin


GO cellular component


nucleus


GO molecular function


transcription factor activity, RNA polymerase II transcription factor recruiting, transcription regulatory region DNA binding, RNA polymerase II transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF00249, Myb-like DNA-binding domain
SMARTSM00717, SANT

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Protein-protein interaction network


The number of partners (degree) is: 4

click to view PPI network

Differentially expressed condition


28 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Flg22 1 h-2.194.43E-04
GSE17464Laer, controlLaer, Flg22 2 h-2.184.74E-04
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d1.794.52E-03
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-2.098.87E-05
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.292.24E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.743.16E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-3.861.87E-09
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-1.521.63E-02
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.845.12E-04
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.724.62E-13
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.899.95E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.874.77E-12
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h-1.513.09E-02
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-1.815.07E-06
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.063.41E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-3.941.42E-09
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-2.623.68E-15
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-2.508.67E-14
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.172.57E-11
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.291.62E-12
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-1.681.22E-07
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-1.877.39E-09
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-3.826.36E-04
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.571.38E-05
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h-2.036.38E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-2.375.30E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h-1.861.30E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-2.021.46E-02






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.