GO Enrichment Analysis of Co-expressed Genes with
AT5G59420
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006654: phosphatidic acid biosynthetic process | 0.00E+00 |
| 2 | GO:0052386: cell wall thickening | 0.00E+00 |
| 3 | GO:0043619: regulation of transcription from RNA polymerase II promoter in response to oxidative stress | 0.00E+00 |
| 4 | GO:0010401: pectic galactan metabolic process | 0.00E+00 |
| 5 | GO:2000068: regulation of defense response to insect | 0.00E+00 |
| 6 | GO:0016337: single organismal cell-cell adhesion | 6.42E-05 |
| 7 | GO:0019478: D-amino acid catabolic process | 6.42E-05 |
| 8 | GO:0051090: regulation of sequence-specific DNA binding transcription factor activity | 6.42E-05 |
| 9 | GO:0006568: tryptophan metabolic process | 1.55E-04 |
| 10 | GO:0006024: glycosaminoglycan biosynthetic process | 1.55E-04 |
| 11 | GO:0052541: plant-type cell wall cellulose metabolic process | 1.55E-04 |
| 12 | GO:0042853: L-alanine catabolic process | 1.55E-04 |
| 13 | GO:0052542: defense response by callose deposition | 1.55E-04 |
| 14 | GO:0015012: heparan sulfate proteoglycan biosynthetic process | 1.55E-04 |
| 15 | GO:0009863: salicylic acid mediated signaling pathway | 1.75E-04 |
| 16 | GO:0006886: intracellular protein transport | 2.00E-04 |
| 17 | GO:0032504: multicellular organism reproduction | 2.63E-04 |
| 18 | GO:0010476: gibberellin mediated signaling pathway | 2.63E-04 |
| 19 | GO:0010325: raffinose family oligosaccharide biosynthetic process | 2.63E-04 |
| 20 | GO:0009410: response to xenobiotic stimulus | 2.63E-04 |
| 21 | GO:0009963: positive regulation of flavonoid biosynthetic process | 3.82E-04 |
| 22 | GO:0071323: cellular response to chitin | 3.82E-04 |
| 23 | GO:0071786: endoplasmic reticulum tubular network organization | 3.82E-04 |
| 24 | GO:0055070: copper ion homeostasis | 3.82E-04 |
| 25 | GO:0009939: positive regulation of gibberellic acid mediated signaling pathway | 5.10E-04 |
| 26 | GO:0000003: reproduction | 5.10E-04 |
| 27 | GO:0009229: thiamine diphosphate biosynthetic process | 6.45E-04 |
| 28 | GO:0006665: sphingolipid metabolic process | 6.45E-04 |
| 29 | GO:0009816: defense response to bacterium, incompatible interaction | 6.66E-04 |
| 30 | GO:0009228: thiamine biosynthetic process | 7.90E-04 |
| 31 | GO:0009759: indole glucosinolate biosynthetic process | 7.90E-04 |
| 32 | GO:0008219: cell death | 8.14E-04 |
| 33 | GO:0030643: cellular phosphate ion homeostasis | 9.40E-04 |
| 34 | GO:0048444: floral organ morphogenesis | 9.40E-04 |
| 35 | GO:0006744: ubiquinone biosynthetic process | 1.10E-03 |
| 36 | GO:0010044: response to aluminum ion | 1.10E-03 |
| 37 | GO:0006631: fatty acid metabolic process | 1.20E-03 |
| 38 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.26E-03 |
| 39 | GO:0006605: protein targeting | 1.26E-03 |
| 40 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 1.44E-03 |
| 41 | GO:0010417: glucuronoxylan biosynthetic process | 1.44E-03 |
| 42 | GO:0009056: catabolic process | 1.62E-03 |
| 43 | GO:0009086: methionine biosynthetic process | 1.81E-03 |
| 44 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 2.01E-03 |
| 45 | GO:0052544: defense response by callose deposition in cell wall | 2.21E-03 |
| 46 | GO:0009620: response to fungus | 2.24E-03 |
| 47 | GO:0000162: tryptophan biosynthetic process | 3.33E-03 |
| 48 | GO:0030150: protein import into mitochondrial matrix | 3.57E-03 |
| 49 | GO:0008299: isoprenoid biosynthetic process | 3.82E-03 |
| 50 | GO:0009269: response to desiccation | 4.08E-03 |
| 51 | GO:0009814: defense response, incompatible interaction | 4.34E-03 |
| 52 | GO:0031348: negative regulation of defense response | 4.34E-03 |
| 53 | GO:0009411: response to UV | 4.60E-03 |
| 54 | GO:0007275: multicellular organism development | 5.27E-03 |
| 55 | GO:0010051: xylem and phloem pattern formation | 5.43E-03 |
| 56 | GO:0010087: phloem or xylem histogenesis | 5.43E-03 |
| 57 | GO:0045489: pectin biosynthetic process | 5.72E-03 |
| 58 | GO:0008360: regulation of cell shape | 5.72E-03 |
| 59 | GO:0006623: protein targeting to vacuole | 6.31E-03 |
| 60 | GO:0006891: intra-Golgi vesicle-mediated transport | 6.61E-03 |
| 61 | GO:0016032: viral process | 6.92E-03 |
| 62 | GO:0006464: cellular protein modification process | 7.55E-03 |
| 63 | GO:0001666: response to hypoxia | 8.54E-03 |
| 64 | GO:0009607: response to biotic stimulus | 8.88E-03 |
| 65 | GO:0016311: dephosphorylation | 9.93E-03 |
| 66 | GO:0009817: defense response to fungus, incompatible interaction | 1.03E-02 |
| 67 | GO:0016042: lipid catabolic process | 1.15E-02 |
| 68 | GO:0009867: jasmonic acid mediated signaling pathway | 1.22E-02 |
| 69 | GO:0045087: innate immune response | 1.22E-02 |
| 70 | GO:0016051: carbohydrate biosynthetic process | 1.22E-02 |
| 71 | GO:0048364: root development | 1.24E-02 |
| 72 | GO:0042542: response to hydrogen peroxide | 1.41E-02 |
| 73 | GO:0051707: response to other organism | 1.45E-02 |
| 74 | GO:0009636: response to toxic substance | 1.58E-02 |
| 75 | GO:0009965: leaf morphogenesis | 1.58E-02 |
| 76 | GO:0009809: lignin biosynthetic process | 1.80E-02 |
| 77 | GO:0006486: protein glycosylation | 1.80E-02 |
| 78 | GO:0009738: abscisic acid-activated signaling pathway | 2.05E-02 |
| 79 | GO:0055085: transmembrane transport | 2.68E-02 |
| 80 | GO:0009058: biosynthetic process | 2.81E-02 |
| 81 | GO:0009790: embryo development | 3.02E-02 |
| 82 | GO:0006633: fatty acid biosynthetic process | 3.19E-02 |
| 83 | GO:0006413: translational initiation | 3.24E-02 |
| 84 | GO:0010150: leaf senescence | 3.41E-02 |
| 85 | GO:0009739: response to gibberellin | 3.69E-02 |
| 86 | GO:0007166: cell surface receptor signaling pathway | 3.75E-02 |
| 87 | GO:0042742: defense response to bacterium | 4.27E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity | 0.00E+00 |
| 2 | GO:0050334: thiaminase activity | 0.00E+00 |
| 3 | GO:0051499: D-aminoacyl-tRNA deacylase activity | 0.00E+00 |
| 4 | GO:0034338: short-chain carboxylesterase activity | 0.00E+00 |
| 5 | GO:0004630: phospholipase D activity | 3.64E-05 |
| 6 | GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity | 3.64E-05 |
| 7 | GO:0047150: betaine-homocysteine S-methyltransferase activity | 6.42E-05 |
| 8 | GO:0010331: gibberellin binding | 1.55E-04 |
| 9 | GO:0050347: trans-octaprenyltranstransferase activity | 1.55E-04 |
| 10 | GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity | 1.55E-04 |
| 11 | GO:0000774: adenyl-nucleotide exchange factor activity | 1.55E-04 |
| 12 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 3.82E-04 |
| 13 | GO:0004834: tryptophan synthase activity | 5.10E-04 |
| 14 | GO:0004659: prenyltransferase activity | 5.10E-04 |
| 15 | GO:0005546: phosphatidylinositol-4,5-bisphosphate binding | 6.45E-04 |
| 16 | GO:0004623: phospholipase A2 activity | 6.45E-04 |
| 17 | GO:0102391: decanoate--CoA ligase activity | 9.40E-04 |
| 18 | GO:0004656: procollagen-proline 4-dioxygenase activity | 9.40E-04 |
| 19 | GO:0008320: protein transmembrane transporter activity | 1.10E-03 |
| 20 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.10E-03 |
| 21 | GO:0052747: sinapyl alcohol dehydrogenase activity | 1.26E-03 |
| 22 | GO:0003843: 1,3-beta-D-glucan synthase activity | 1.44E-03 |
| 23 | GO:0042803: protein homodimerization activity | 1.50E-03 |
| 24 | GO:0004161: dimethylallyltranstransferase activity | 2.21E-03 |
| 25 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 2.42E-03 |
| 26 | GO:0008061: chitin binding | 3.09E-03 |
| 27 | GO:0003712: transcription cofactor activity | 3.09E-03 |
| 28 | GO:0030170: pyridoxal phosphate binding | 3.39E-03 |
| 29 | GO:0031418: L-ascorbic acid binding | 3.57E-03 |
| 30 | GO:0051087: chaperone binding | 3.82E-03 |
| 31 | GO:0035251: UDP-glucosyltransferase activity | 4.08E-03 |
| 32 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 4.34E-03 |
| 33 | GO:0005102: receptor binding | 5.15E-03 |
| 34 | GO:0016791: phosphatase activity | 7.55E-03 |
| 35 | GO:0030247: polysaccharide binding | 9.57E-03 |
| 36 | GO:0016757: transferase activity, transferring glycosyl groups | 1.21E-02 |
| 37 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.22E-02 |
| 38 | GO:0003993: acid phosphatase activity | 1.25E-02 |
| 39 | GO:0035091: phosphatidylinositol binding | 1.54E-02 |
| 40 | GO:0016874: ligase activity | 2.21E-02 |
| 41 | GO:0051082: unfolded protein binding | 2.31E-02 |
| 42 | GO:0016758: transferase activity, transferring hexosyl groups | 2.66E-02 |
| 43 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.76E-02 |
| 44 | GO:0005507: copper ion binding | 3.01E-02 |
| 45 | GO:0008565: protein transporter activity | 3.08E-02 |
| 46 | GO:0015144: carbohydrate transmembrane transporter activity | 3.08E-02 |
| 47 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.24E-02 |
| 48 | GO:0005351: sugar:proton symporter activity | 3.35E-02 |
| 49 | GO:0003743: translation initiation factor activity | 3.80E-02 |
| 50 | GO:0005509: calcium ion binding | 3.94E-02 |
| 51 | GO:0005524: ATP binding | 3.94E-02 |
| 52 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 4.04E-02 |
| 53 | GO:0042802: identical protein binding | 4.04E-02 |
| 54 | GO:0008168: methyltransferase activity | 4.52E-02 |
| 55 | GO:0004601: peroxidase activity | 4.65E-02 |
| 56 | GO:0005215: transporter activity | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0001405: presequence translocase-associated import motor | 6.42E-05 |
| 2 | GO:0030134: ER to Golgi transport vesicle | 1.55E-04 |
| 3 | GO:0005794: Golgi apparatus | 2.63E-04 |
| 4 | GO:0071782: endoplasmic reticulum tubular network | 3.82E-04 |
| 5 | GO:0005789: endoplasmic reticulum membrane | 7.87E-04 |
| 6 | GO:0005801: cis-Golgi network | 9.40E-04 |
| 7 | GO:0009986: cell surface | 1.10E-03 |
| 8 | GO:0031902: late endosome membrane | 1.20E-03 |
| 9 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.26E-03 |
| 10 | GO:0000148: 1,3-beta-D-glucan synthase complex | 1.44E-03 |
| 11 | GO:0030665: clathrin-coated vesicle membrane | 1.81E-03 |
| 12 | GO:0017119: Golgi transport complex | 2.01E-03 |
| 13 | GO:0016021: integral component of membrane | 2.26E-03 |
| 14 | GO:0005795: Golgi stack | 3.09E-03 |
| 15 | GO:0009506: plasmodesma | 3.85E-03 |
| 16 | GO:0005886: plasma membrane | 4.11E-03 |
| 17 | GO:0031410: cytoplasmic vesicle | 4.34E-03 |
| 18 | GO:0005622: intracellular | 7.85E-03 |
| 19 | GO:0000151: ubiquitin ligase complex | 1.03E-02 |
| 20 | GO:0005783: endoplasmic reticulum | 1.11E-02 |
| 21 | GO:0000325: plant-type vacuole | 1.14E-02 |
| 22 | GO:0005774: vacuolar membrane | 1.24E-02 |
| 23 | GO:0000139: Golgi membrane | 1.36E-02 |
| 24 | GO:0009543: chloroplast thylakoid lumen | 2.71E-02 |
| 25 | GO:0005623: cell | 2.76E-02 |
| 26 | GO:0005759: mitochondrial matrix | 3.19E-02 |
| 27 | GO:0005802: trans-Golgi network | 3.39E-02 |
| 28 | GO:0005615: extracellular space | 3.69E-02 |
| 29 | GO:0005768: endosome | 3.85E-02 |